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The map label for this gene is ysnF [H]

Identifier: 153931484

GI number: 153931484

Start: 2596487

End: 2597155

Strand: Reverse

Name: ysnF [H]

Synonym: CLB_2485

Alternate gene names: 153931484

Gene position: 2597155-2596487 (Counterclockwise)

Preceding gene: 153932401

Following gene: 153931332

Centisome position: 67.22

GC content: 29.6

Gene sequence:

>669_bases
ATGGTGAACAAGGATATACCTAATATAAGAAGTAGTGGATATTTAACAAGTGCTATTATTGGAGGAATAATTGGTTTTAT
AATTGCTATTTTGTTTAAGTTCTCTATTTTAACTATACCTGGATTTGTAACTATATTTACAATTACATCAATTGCCCCAA
TAATAACCGGAACTATATTAGGCATTGTTGTGGGCTTAATTATATGTAGGCTAATGCTTCAGAGTAAGATATATGAGAAC
GATATAGAAAATACTCCTTACAATTCAGATAGTGATATGAAGATGCAACTTCGCGAAGAACAGATAGAAATGTCTAAGAA
AAAAATACAAACTGGTGAGGTATCTATTCACAAAGAAGTTTTAACTGAAGAAAGGAATATTACTGTACCTGTAAAACGTG
AGGAACTTGTTATTGAAAATACTGTTTGTGATCCACAATTTCATGATAAATCAGATGGTCATACTGAAACTATTCGTATT
CCTATAAGAGAAGAACGTATTGACATACACAAGCAACCAGTAACTTTAGAAGATGTTTCAGTTAAAAATCATCAATATGA
AGAGGTAAAACATATAACTGAAACATTAAAAAAGGAAGTACCCTATATTAGTATTAATGGAGATGCAAAAATTGTAAATA
AGGAAATCGATAAAAAATATCAAAGATAG

Upstream 100 bases:

>100_bases
TACAGATGAGGGCTTCCATTAAATAATTTATAAAATAAATAAAAAAACACCTCTCAAATTGTATATCAGATTTAAGAGGT
GTTTTTTAGGAGGATAAAGC

Downstream 100 bases:

>100_bases
AAATATGGGATAATTAATAGCTCTAAACACTTTCTGATTGCAAAAAGGGAGGATTAGGAAGTATTTTGCTTAACGTCATA
ACTGAAAAATGCACAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MVNKDIPNIRSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTILGIVVGLIICRLMLQSKIYEN
DIENTPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEVLTEERNITVPVKREELVIENTVCDPQFHDKSDGHTETIRI
PIREERIDIHKQPVTLEDVSVKNHQYEEVKHITETLKKEVPYISINGDAKIVNKEIDKKYQR

Sequences:

>Translated_222_residues
MVNKDIPNIRSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTILGIVVGLIICRLMLQSKIYEN
DIENTPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEVLTEERNITVPVKREELVIENTVCDPQFHDKSDGHTETIRI
PIREERIDIHKQPVTLEDVSVKNHQYEEVKHITETLKKEVPYISINGDAKIVNKEIDKKYQR
>Mature_222_residues
MVNKDIPNIRSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTILGIVVGLIICRLMLQSKIYEN
DIENTPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEVLTEERNITVPVKREELVIENTVCDPQFHDKSDGHTETIRI
PIREERIDIHKQPVTLEDVSVKNHQYEEVKHITETLKKEVPYISINGDAKIVNKEIDKKYQR

Specific function: Unknown

COG id: COG3861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011756
- InterPro:   IPR019060 [H]

Pfam domain/function: PF09557 DUF2382 [H]

EC number: NA

Molecular weight: Translated: 25318; Mature: 25318

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKDIPNIRSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVVGLIICRLMLQSKIYENDIENTPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LTEERNITVPVKREELVIENTVCDPQFHDKSDGHTETIRIPIREERIDIHKQPVTLEDVS
HHCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCEEECCC
VKNHQYEEVKHITETLKKEVPYISINGDAKIVNKEIDKKYQR
CCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNKDIPNIRSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVVGLIICRLMLQSKIYENDIENTPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LTEERNITVPVKREELVIENTVCDPQFHDKSDGHTETIRIPIREERIDIHKQPVTLEDVS
HHCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCEEECCC
VKNHQYEEVKHITETLKKEVPYISINGDAKIVNKEIDKKYQR
CCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 10568751; 11988534 [H]