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The map label for this gene is prdA [H]

Identifier: 153931353

GI number: 153931353

Start: 2494770

End: 2495198

Strand: Reverse

Name: prdA [H]

Synonym: CLB_2360

Alternate gene names: 153931353

Gene position: 2495198-2494770 (Counterclockwise)

Preceding gene: 153934307

Following gene: 153932986

Centisome position: 64.58

GC content: 34.27

Gene sequence:

>429_bases
ATGTCAATGTCAGCAGAACATGCAGAAGAATTAAAAAATGAACCAGCAGTAGTTTGCTGCAGAACAGAGGAAGGAACAAT
ATTATCTGCAGATAATTTAGAGGATCCAGATATATTTCCAGATATGATTGATTCTGGATTATTAACTATGCCAGAGGATC
ATTTAAAAGTAGGTCAAGTAATAGGAGCAAAATTATTAAAAACTATAGATTCATTAACACCATTAACTCCAGCTATAGTT
GAAGGCTATAAAGAAATTGGTGGAGAAGAAGTGAAGAAAGAAGAAGCACCTAAAGCTGAAGAAACTGTAGAAGTTTTAGA
AGCACCAGAAGTTTGTGCAGAAGGTTGTGGAGTAGCTTCTGTAGAAGGTGGAGTACTTAAAATAAAAATAGAAGAAGGAA
GAGGAATAGATATAGAACTTCCTCTATAA

Upstream 100 bases:

>100_bases
GGATCATGTACTTAGAACTGTAGATTATAAGTTAACAAGGAGACTTCCAAAAGAGAAGCTCCATAAATAAAATTATTTTT
AAACTTAGGAGGTATATATT

Downstream 100 bases:

>100_bases
AAATTAAAAAACAAAGGCTTTTATGCCTTTGTTTCAGGCTGTAGACAACCAGATAGTCTACAGCTTATTTTTATGCTAAA
ATATGGTGATAAAAATGATG

Product: PrdA domain-containing protein

Products: NA

Alternate protein names: D-proline reductase 45 kDa subunit; D-proline reductase 23 kDa subunit [H]

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSMSAEHAEELKNEPAVVCCRTEEGTILSADNLEDPDIFPDMIDSGLLTMPEDHLKVGQVIGAKLLKTIDSLTPLTPAIV
EGYKEIGGEEVKKEEAPKAEETVEVLEAPEVCAEGCGVASVEGGVLKIKIEEGRGIDIELPL

Sequences:

>Translated_142_residues
MSMSAEHAEELKNEPAVVCCRTEEGTILSADNLEDPDIFPDMIDSGLLTMPEDHLKVGQVIGAKLLKTIDSLTPLTPAIV
EGYKEIGGEEVKKEEAPKAEETVEVLEAPEVCAEGCGVASVEGGVLKIKIEEGRGIDIELPL
>Mature_141_residues
SMSAEHAEELKNEPAVVCCRTEEGTILSADNLEDPDIFPDMIDSGLLTMPEDHLKVGQVIGAKLLKTIDSLTPLTPAIVE
GYKEIGGEEVKKEEAPKAEETVEVLEAPEVCAEGCGVASVEGGVLKIKIEEGRGIDIELPL

Specific function: D-proline reductase catalyzes the reductive cleavage of a C-N bond in D-proline resulting in the formation of 5- aminovalerate. The alpha subunit has been shown to bind D-proline, presumably via the pyruvoyl group [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015417 [H]

Pfam domain/function: PF09338 Gly_reductase [H]

EC number: =1.21.4.1 [H]

Molecular weight: Translated: 15156; Mature: 15025

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSAEHAEELKNEPAVVCCRTEEGTILSADNLEDPDIFPDMIDSGLLTMPEDHLKVGQV
CCCCHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHH
IGAKLLKTIDSLTPLTPAIVEGYKEIGGEEVKKEEAPKAEETVEVLEAPEVCAEGCGVAS
HHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEE
VEGGVLKIKIEEGRGIDIELPL
CCCCEEEEEECCCCCEEEEECC
>Mature Secondary Structure 
SMSAEHAEELKNEPAVVCCRTEEGTILSADNLEDPDIFPDMIDSGLLTMPEDHLKVGQV
CCCHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHH
IGAKLLKTIDSLTPLTPAIVEGYKEIGGEEVKKEEAPKAEETVEVLEAPEVCAEGCGVAS
HHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEE
VEGGVLKIKIEEGRGIDIELPL
CCCCEEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10085076 [H]