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The map label for this gene is comFC [H]

Identifier: 152977401

GI number: 152977401

Start: 3784985

End: 3785689

Strand: Reverse

Name: comFC [H]

Synonym: Bcer98_3729

Alternate gene names: 152977401

Gene position: 3785689-3784985 (Counterclockwise)

Preceding gene: 152977402

Following gene: 152977400

Centisome position: 92.63

GC content: 38.72

Gene sequence:

>705_bases
ATGCACTGTTTACTTTGTGACGATTATATTGCCGAAGAAGCGAGTTGGTATTCTTTTTTTATTCGGTCTCACGATAGATA
CATATGCAATCTATGTGAACGAAAACTTTCCTATATAACAGGAGAATTTTGTCATGGCTGTGGTCGTCCGTTATCTTCTC
TTGATCCGGCATATAGGTACGGGGAAATTTGTAGAGATTGTATGAAATGGAAAGAGGAAAATTGCTTTCCTTTCATAAAG
AATCGTTCTACATATGTGTATAATGATGGAATGAAAGAGATATTAGCACGGTTTAAGTTTCGAGGTGATGCAGAGCTTGT
GAAGGTTTTTCAAATTGGCTTTGTATCGACATTTCAAAAATACTTTTCAAATGCACAATTCCTTATTCCTGTGCCCCTTA
GTAAAGAACGAGAGTATGAGCGGGGCTTTAATCAGGCTGAACGATTAGCAGCCTGCTTGCCAATTCCTATTTTACCAACA
TCTTTAACTAGAAAAGAGACAGAGAAACAGAGCAAAAAGGGGAGAATAGAGAGGATAGCTGCTGCCAATCCTTTTTACTT
TCAAGAAGAAGAGTGTTTGACAGGGCAACATCTTGTAATTATAGATGACGTATATACGACAGGTATTACGGTGAGGCAAG
TCGGTGAATTACTATATCATGCAGGTGCACAAAGTGTATCCAGTTTGACGCTTTGCCGAGGATAG

Upstream 100 bases:

>100_bases
TCATTTATTTTCATTATGGAAAAACGAAAGCAATGACTGCTGCGAAAAAGCATATTCAATTTATGAATAAAAGGGCTAAA
CAAGAAGGGTTGATAGATTG

Downstream 100 bases:

>100_bases
TAGATGTCGAAAGATACAATAAAAAGGCGACAAGTCTTCTTTGACTTGACAGGTTGTCATTCGTTATAGTCAAACTATAG
GACAAATGTCCTGATTTTTA

Product: comF operon protein 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MHCLLCDDYIAEEASWYSFFIRSHDRYICNLCERKLSYITGEFCHGCGRPLSSLDPAYRYGEICRDCMKWKEENCFPFIK
NRSTYVYNDGMKEILARFKFRGDAELVKVFQIGFVSTFQKYFSNAQFLIPVPLSKEREYERGFNQAERLAACLPIPILPT
SLTRKETEKQSKKGRIERIAAANPFYFQEEECLTGQHLVIIDDVYTTGITVRQVGELLYHAGAQSVSSLTLCRG

Sequences:

>Translated_234_residues
MHCLLCDDYIAEEASWYSFFIRSHDRYICNLCERKLSYITGEFCHGCGRPLSSLDPAYRYGEICRDCMKWKEENCFPFIK
NRSTYVYNDGMKEILARFKFRGDAELVKVFQIGFVSTFQKYFSNAQFLIPVPLSKEREYERGFNQAERLAACLPIPILPT
SLTRKETEKQSKKGRIERIAAANPFYFQEEECLTGQHLVIIDDVYTTGITVRQVGELLYHAGAQSVSSLTLCRG
>Mature_234_residues
MHCLLCDDYIAEEASWYSFFIRSHDRYICNLCERKLSYITGEFCHGCGRPLSSLDPAYRYGEICRDCMKWKEENCFPFIK
NRSTYVYNDGMKEILARFKFRGDAELVKVFQIGFVSTFQKYFSNAQFLIPVPLSKEREYERGFNQAERLAACLPIPILPT
SLTRKETEKQSKKGRIERIAAANPFYFQEEECLTGQHLVIIDDVYTTGITVRQVGELLYHAGAQSVSSLTLCRG

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 27079; Mature: 27079

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCLLCDDYIAEEASWYSFFIRSHDRYICNLCERKLSYITGEFCHGCGRPLSSLDPAYRY
CEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHH
GEICRDCMKWKEENCFPFIKNRSTYVYNDGMKEILARFKFRGDAELVKVFQIGFVSTFQK
HHHHHHHHHHCCCCCCCEECCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YFSNAQFLIPVPLSKEREYERGFNQAERLAACLPIPILPTSLTRKETEKQSKKGRIERIA
HHCCCEEEEECCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHH
AANPFYFQEEECLTGQHLVIIDDVYTTGITVRQVGELLYHAGAQSVSSLTLCRG
CCCCCEECCHHHCCCCEEEEEECHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCC
>Mature Secondary Structure
MHCLLCDDYIAEEASWYSFFIRSHDRYICNLCERKLSYITGEFCHGCGRPLSSLDPAYRY
CEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHH
GEICRDCMKWKEENCFPFIKNRSTYVYNDGMKEILARFKFRGDAELVKVFQIGFVSTFQK
HHHHHHHHHHCCCCCCCEECCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YFSNAQFLIPVPLSKEREYERGFNQAERLAACLPIPILPTSLTRKETEKQSKKGRIERIA
HHCCCEEEEECCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHH
AANPFYFQEEECLTGQHLVIIDDVYTTGITVRQVGELLYHAGAQSVSSLTLCRG
CCCCCEECCHHHCCCCEEEEEECHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 8045879; 9384377 [H]