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The map label for this gene is swrAB [H]

Identifier: 152977392

GI number: 152977392

Start: 3773582

End: 3774766

Strand: Reverse

Name: swrAB [H]

Synonym: Bcer98_3720

Alternate gene names: 152977392

Gene position: 3774766-3773582 (Counterclockwise)

Preceding gene: 152977393

Following gene: 152977390

Centisome position: 92.36

GC content: 38.99

Gene sequence:

>1185_bases
GTGGAGGCGTGGGCTTTTGAAATTATACGAGCAGTTGGACGCTTTTTTTCGCATCCTGCTGTCTATATATTTGTAATAAG
TAGTATTTTTGTTGGCTATTTACGTATATTAAGAGAACGAAAAGATTTTTCTTTTAAAGTATATGATCTTTGGTTTGAAC
TGCGAACATCTTTATTTGCTGGAATTGGATATGGGTTGTTTGCATCGATTATAACAATTGGGCTTGGACTTGTTGTATCA
GAGGCAAGTATATGGATGATTTTGATTTGGACACTCATATTTGGATTAACGGCTTGGTATCGATATTTATCGGCAGCCTA
CACATTTGGAGCAGCTATTGCAGTTGTTTTATTATCTACGAATATACCAATCTCTCTGCTGAAAATAGGTTCAGGAGAAG
AAGATACTATTGTATCACTTGCGATTTTACTTGGAATTATGCTCGTTATCGAGGGAAGGTTAATTTCGAAGAATGCAGTC
CGATATTCTACACCGATGTTAAAAAGAAGTAAGCGCGGTTTAAAGGTTGGATTACATGAATCGAAGCGTATATGGCTCGT
TCCAATCTTTATTCTTGTTCCAGGTGACGCTGTAACACAACTATTTTCATGGTGGCCTATTGTTTCAGTAGGTTCACAAA
CATACTCTTTATTTCTTGTTCCATTTTTAATCGGTTTTATGAGGAAAATTAGAAGTTACGAGCCGAGAGAAGCGCTGCTA
TTTACAGGAAGACGTGTATTTGGATTGGCTGCAATTGTGCTGGTTTTAGGCATTGCAAGTTATTGGTGGCATGTATTAGC
CATTGTAGCGATGGGAGCTGCAATGCTTGGACGCTTTACAATTGCGATGCAGGAGCGAATTACCGATGAGACACGCCCCG
CCTATTTTGCAACGCGTGAAGCTGGACTAGTAGTATTAGATACGATTCCAAATACTGTTGGTGCAGAACTACAGTTAAAG
CCAGGAGAGATGATTACAAAAGTAAATGGTGTGATTCCAAAAACAGCCGAGGAATTTTACGCTGCTTTGCAAACGAAGAC
AACAGGAGCGTTTTGTAAATTGGAAGTACTTGATACAAAAGGTGAGCTTCGTCTTGCGCAAACGGCATTGTATGCAGATG
GACATCATGAATTAGGGATTATATTTGTAGAACAAGATCATCAGTGGGATACAGAAGCTGTATAA

Upstream 100 bases:

>100_bases
AAATGTGATGCCTGTGTTTTTTTATGCGTGTTAAACAAACGCTTGTTTAGTTGTGTTAATATAAAAAGAAAGAATGATAT
AAATGGTGGTGAATGAATTC

Downstream 100 bases:

>100_bases
AGCGAAAGACCTTCGAAATAGAAGGTCTTTTTTTATAGGCAAACGAAATAGTGATAAGAAACCAGCTAATATGTTGAACC
ACCTCTATTTCTTGGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MEAWAFEIIRAVGRFFSHPAVYIFVISSIFVGYLRILRERKDFSFKVYDLWFELRTSLFAGIGYGLFASIITIGLGLVVS
EASIWMILIWTLIFGLTAWYRYLSAAYTFGAAIAVVLLSTNIPISLLKIGSGEEDTIVSLAILLGIMLVIEGRLISKNAV
RYSTPMLKRSKRGLKVGLHESKRIWLVPIFILVPGDAVTQLFSWWPIVSVGSQTYSLFLVPFLIGFMRKIRSYEPREALL
FTGRRVFGLAAIVLVLGIASYWWHVLAIVAMGAAMLGRFTIAMQERITDETRPAYFATREAGLVVLDTIPNTVGAELQLK
PGEMITKVNGVIPKTAEEFYAALQTKTTGAFCKLEVLDTKGELRLAQTALYADGHHELGIIFVEQDHQWDTEAV

Sequences:

>Translated_394_residues
MEAWAFEIIRAVGRFFSHPAVYIFVISSIFVGYLRILRERKDFSFKVYDLWFELRTSLFAGIGYGLFASIITIGLGLVVS
EASIWMILIWTLIFGLTAWYRYLSAAYTFGAAIAVVLLSTNIPISLLKIGSGEEDTIVSLAILLGIMLVIEGRLISKNAV
RYSTPMLKRSKRGLKVGLHESKRIWLVPIFILVPGDAVTQLFSWWPIVSVGSQTYSLFLVPFLIGFMRKIRSYEPREALL
FTGRRVFGLAAIVLVLGIASYWWHVLAIVAMGAAMLGRFTIAMQERITDETRPAYFATREAGLVVLDTIPNTVGAELQLK
PGEMITKVNGVIPKTAEEFYAALQTKTTGAFCKLEVLDTKGELRLAQTALYADGHHELGIIFVEQDHQWDTEAV
>Mature_394_residues
MEAWAFEIIRAVGRFFSHPAVYIFVISSIFVGYLRILRERKDFSFKVYDLWFELRTSLFAGIGYGLFASIITIGLGLVVS
EASIWMILIWTLIFGLTAWYRYLSAAYTFGAAIAVVLLSTNIPISLLKIGSGEEDTIVSLAILLGIMLVIEGRLISKNAV
RYSTPMLKRSKRGLKVGLHESKRIWLVPIFILVPGDAVTQLFSWWPIVSVGSQTYSLFLVPFLIGFMRKIRSYEPREALL
FTGRRVFGLAAIVLVLGIASYWWHVLAIVAMGAAMLGRFTIAMQERITDETRPAYFATREAGLVVLDTIPNTVGAELQLK
PGEMITKVNGVIPKTAEEFYAALQTKTTGAFCKLEVLDTKGELRLAQTALYADGHHELGIIFVEQDHQWDTEAV

Specific function: Required for surface-adhering cells to differentiate into hyperflagellated and elongated swarm cells [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44063; Mature: 44063

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAWAFEIIRAVGRFFSHPAVYIFVISSIFVGYLRILRERKDFSFKVYDLWFELRTSLFA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
GIGYGLFASIITIGLGLVVSEASIWMILIWTLIFGLTAWYRYLSAAYTFGAAIAVVLLST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NIPISLLKIGSGEEDTIVSLAILLGIMLVIEGRLISKNAVRYSTPMLKRSKRGLKVGLHE
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHCCHHHHHCCCCCEECCCC
SKRIWLVPIFILVPGDAVTQLFSWWPIVSVGSQTYSLFLVPFLIGFMRKIRSYEPREALL
CCEEEEEEEEEEECCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FTGRRVFGLAAIVLVLGIASYWWHVLAIVAMGAAMLGRFTIAMQERITDETRPAYFATRE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
AGLVVLDTIPNTVGAELQLKPGEMITKVNGVIPKTAEEFYAALQTKTTGAFCKLEVLDTK
CCEEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCC
GELRLAQTALYADGHHELGIIFVEQDHQWDTEAV
CCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MEAWAFEIIRAVGRFFSHPAVYIFVISSIFVGYLRILRERKDFSFKVYDLWFELRTSLFA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
GIGYGLFASIITIGLGLVVSEASIWMILIWTLIFGLTAWYRYLSAAYTFGAAIAVVLLST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NIPISLLKIGSGEEDTIVSLAILLGIMLVIEGRLISKNAVRYSTPMLKRSKRGLKVGLHE
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHCCHHHHHCCCCCEECCCC
SKRIWLVPIFILVPGDAVTQLFSWWPIVSVGSQTYSLFLVPFLIGFMRKIRSYEPREALL
CCEEEEEEEEEEECCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FTGRRVFGLAAIVLVLGIASYWWHVLAIVAMGAAMLGRFTIAMQERITDETRPAYFATRE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
AGLVVLDTIPNTVGAELQLKPGEMITKVNGVIPKTAEEFYAALQTKTTGAFCKLEVLDTK
CCEEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCC
GELRLAQTALYADGHHELGIIFVEQDHQWDTEAV
CCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]