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The map label for this gene is yvdD [H]

Identifier: 152977304

GI number: 152977304

Start: 3684144

End: 3684722

Strand: Reverse

Name: yvdD [H]

Synonym: Bcer98_3627

Alternate gene names: 152977304

Gene position: 3684722-3684144 (Counterclockwise)

Preceding gene: 152977306

Following gene: 152977302

Centisome position: 90.16

GC content: 38.0

Gene sequence:

>579_bases
ATGAGAAAAATTTGTGTATTTGCAGGTTCGAACTTAGGAGAGAGACCTGAATTTAAAGAGCAGGCTATTAAGCTTGGAAA
AATGCTTGTCCAGAATCATTATGAACTAGTATATGGCGGCTCATGTGTAGGATTAATGGGAGAAGTAGCGAATGAAGTGT
TACGTCTAGGTGGACGTGTTACAGGTGTTATGCCTCGTGGGTTATTTCGTGGAGAGATTGTTCATGAAGGGTTAACAGAA
CTCATTGAAGTAGAAACAATGCATGAACGTAAAGCGAAAATGGGAGAACTTGCAGATGCATTTATTGCGTTACCTGGTGG
ATATGGGACGTTTGAAGAATTATTTGAAGTCGTATGCTGGTCGCAAATTGGAATTCATGATAAACCAGTTGGTTTATTAA
ATGTGAAAGATTTTTATGAGCCGATTTTGCAAATGGTAAATCGTGCAGCAGAAGAAGGATTTATGAATCCATCTAATAAA
GAATTAATCGTTTCAGCAGATGATGCAGAAGAATTATTGCGCCATTTGAAAAATTACCAGCGCCCTGTAATGGGGAATAA
GTGGAAACAATTATCGTAA

Upstream 100 bases:

>100_bases
CCATCTTTGAAATTCAACTATATTCAATTCTTTCTCATCCCCTCAATATGTTGTACAATGTTTATTGTATCATAACAATA
TATAGCTTTGGGGTGTAGGT

Downstream 100 bases:

>100_bases
ATAATGAATTCAAAAATGCATGTTTTTTAACATGCATTTTTATATAGAGAAATAAGCTAGAAGAGAGAAAAGAACTTTTC
AGCAGAATTCGTGTCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRKICVFAGSNLGERPEFKEQAIKLGKMLVQNHYELVYGGSCVGLMGEVANEVLRLGGRVTGVMPRGLFRGEIVHEGLTE
LIEVETMHERKAKMGELADAFIALPGGYGTFEELFEVVCWSQIGIHDKPVGLLNVKDFYEPILQMVNRAAEEGFMNPSNK
ELIVSADDAEELLRHLKNYQRPVMGNKWKQLS

Sequences:

>Translated_192_residues
MRKICVFAGSNLGERPEFKEQAIKLGKMLVQNHYELVYGGSCVGLMGEVANEVLRLGGRVTGVMPRGLFRGEIVHEGLTE
LIEVETMHERKAKMGELADAFIALPGGYGTFEELFEVVCWSQIGIHDKPVGLLNVKDFYEPILQMVNRAAEEGFMNPSNK
ELIVSADDAEELLRHLKNYQRPVMGNKWKQLS
>Mature_192_residues
MRKICVFAGSNLGERPEFKEQAIKLGKMLVQNHYELVYGGSCVGLMGEVANEVLRLGGRVTGVMPRGLFRGEIVHEGLTE
LIEVETMHERKAKMGELADAFIALPGGYGTFEELFEVVCWSQIGIHDKPVGLLNVKDFYEPILQMVNRAAEEGFMNPSNK
ELIVSADDAEELLRHLKNYQRPVMGNKWKQLS

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=207, Percent_Identity=35.2657004830918, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21538; Mature: 21538

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKICVFAGSNLGERPEFKEQAIKLGKMLVQNHYELVYGGSCVGLMGEVANEVLRLGGRV
CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCC
TGVMPRGLFRGEIVHEGLTELIEVETMHERKAKMGELADAFIALPGGYGTFEELFEVVCW
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
SQIGIHDKPVGLLNVKDFYEPILQMVNRAAEEGFMNPSNKELIVSADDAEELLRHLKNYQ
HHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHC
RPVMGNKWKQLS
CCCCCCCCCCCC
>Mature Secondary Structure
MRKICVFAGSNLGERPEFKEQAIKLGKMLVQNHYELVYGGSCVGLMGEVANEVLRLGGRV
CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCC
TGVMPRGLFRGEIVHEGLTELIEVETMHERKAKMGELADAFIALPGGYGTFEELFEVVCW
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
SQIGIHDKPVGLLNVKDFYEPILQMVNRAAEEGFMNPSNKELIVSADDAEELLRHLKNYQ
HHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHC
RPVMGNKWKQLS
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]