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The map label for this gene is mcpC [H]

Identifier: 152977282

GI number: 152977282

Start: 3660979

End: 3662979

Strand: Reverse

Name: mcpC [H]

Synonym: Bcer98_3605

Alternate gene names: 152977282

Gene position: 3662979-3660979 (Counterclockwise)

Preceding gene: 152977284

Following gene: 152977281

Centisome position: 89.62

GC content: 36.93

Gene sequence:

>2001_bases
ATGTGGAGAAGTTTACGTTTGAAAATTTCAGTCGTGTTTTCAGTGCTTATTACGCTGCTGTTTGCAATTTTAGGGACAAC
TGTATATCAATTGCAGCAGGAGGGAGCGCAAGATACACTCAATCAATATTCTCAAAATACAATGGATCTTGTCACTGAGC
AACTTCATACATTTATACAAGGGATTGAAGAAGATATAGGGCATTATGGAACAAATAGCTTAGTACAAGAAGCATTGCAA
AGTGGTCTAACTCCAGAAAATGAGGATGCTATTTTAAAAGAATTTTTACACTTCAAAAAGAATCATCCAGATATTTTAGA
TTTATATATTGGGACGAAAGATAAGAGAACGCTAAGTGCAAATCTCGCTGGGGGAGGAGCATTACCAGAGGGATATGATC
CAACTTCTAGACCGTGGTACAAAAATGCTGAGGCAGATACGAAATCAGTTCATTGGGGGCAGCCCTTATATGAGGCTACA
ACAGGTAAATTAAGTATTGGTGTTTCAAAAGCGATTGTTGGTGAGGATGGTTCTGTATTAGGGGTTGTAGCGATGGATAT
ATCGCTAGGAACGATTCAAAAACTACTACATAATATTCAATATAATTATGCTGGGGAAATGTTCATCATTAACGATAAAA
ACATTGCGCTTGTATATCCAGAAAAAGTAGGGAAAGATGTTTCAAAAGAGCCGCTTATCCAAAGTTTGAAAAAAGATACA
ACGAAATTTGCTGAATCTAAATTAGAAGGAAATGAGATAGTAGCCTATAGCCAATTATTTGATAAGATGAAATGGAAAAT
AGGAATCGTCTATCCTAAAGAAACAATTGATCGTGTATTATCTGAAACACGTAATACAGTAATTGGGATGACATGTATGA
GTTTATTGGTTGCGATTACTGTATCTTTTTTATTTGCAAGAAAATTAGCAAGACCTTTGCAGTTATTAACAAAGCATGTT
CAACGAGTAGCTGAAGGTGATTTAACATTGAAAATGGAAGTGATGAGTAAAGATGAGGTAGGAACGCTTACCACTCATTT
TAATCATATGGTTGACCAGATGAATGAAATGGTAAGTAGCATTAAACATAATATACAGACCGTTCAACAATCTACCCGTC
ATCTTCATTATTTAACGAATGAAACTGTTGCTGCAAGTAAAGAGGTTTCCGGGGCGATGGAAGATGTAACGGGCGGGGCA
TCAACGCTTGCAAATGGTGTAGAGGAAGTTTCCACTCAACTTGGAAATATGACTGATTCAGTGGAACAAATGATTGAATC
AGTAGAAGCGATTAAGGAAGTAACAAATAAGGCAGAACAAGCATCTAAACAAGGTCTTGATACGATGCATCATTTAGTTC
ACACAAGAGGACAATCATCATCTATTGTAGATGGTACAGAAGAAGCCTCCTGTAAACTAGAGCAGAGAGTACAATCTATT
CAAAATGTAGTAGAAATCATTAAAGAAATTTCGGATCAAACAAATTTACTTGCTTTAAATGCATCGATTGAAGCGGCGAG
AGCAGGCGAACAAGGAAAAGGATTTGCAGTAGTCGCAGAAGAGGTGAGAAAGTTAGCGGAACAATCAAAAGGAGCAACAG
AGGAAATCGCTATGATGATAAGAGATGTACAGTTAGAAGTTGCGCGTGTTGTAGACGTTGTAAGTAAATTGAAAGACATT
GCAGATATACAAAATAAGGTTACAGAAGAAGCAGAAACAGAGTTTCGTATCATTATGTCTGTAGTAGATACGATTATTAC
TTCGGTTGAAAAAATCGTTAGGGAGGTAAAAAATATAGGAGATGAGCAAGAAGAAATTACAGAAGTGATGCAAACAATTG
CAGGGACAAGTCAAGAAAGTGCCGCAGTTTCTGAGGAGGTAAATGCATCTACTGAATCGCAAGTGGCTCACTTAGAGAAA
GTATCCGATACGATGCGAATGCTAGGCGAGGAAATGAAAGGCCTAGAAAAATTAGTAGCACAGTTTAAAGTAGAAGAATA
A

Upstream 100 bases:

>100_bases
TTTTTGAAATTATATAGATTGAGCTTTTTTTATTATCTATTATACTTAATATATCGATTGACATAATTAAATTTCATCGA
GAAGGGGATGTTTCAAAGGA

Downstream 100 bases:

>100_bases
GCGAAAGATTAGTAAACAAATATATATTTCGGTACAATAAAAAAATGTAAATATATATTTTATTAGGAGGAAAATGATCA
TGGCAATTGTTGATGTATCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MWRSLRLKISVVFSVLITLLFAILGTTVYQLQQEGAQDTLNQYSQNTMDLVTEQLHTFIQGIEEDIGHYGTNSLVQEALQ
SGLTPENEDAILKEFLHFKKNHPDILDLYIGTKDKRTLSANLAGGGALPEGYDPTSRPWYKNAEADTKSVHWGQPLYEAT
TGKLSIGVSKAIVGEDGSVLGVVAMDISLGTIQKLLHNIQYNYAGEMFIINDKNIALVYPEKVGKDVSKEPLIQSLKKDT
TKFAESKLEGNEIVAYSQLFDKMKWKIGIVYPKETIDRVLSETRNTVIGMTCMSLLVAITVSFLFARKLARPLQLLTKHV
QRVAEGDLTLKMEVMSKDEVGTLTTHFNHMVDQMNEMVSSIKHNIQTVQQSTRHLHYLTNETVAASKEVSGAMEDVTGGA
STLANGVEEVSTQLGNMTDSVEQMIESVEAIKEVTNKAEQASKQGLDTMHHLVHTRGQSSSIVDGTEEASCKLEQRVQSI
QNVVEIIKEISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKGATEEIAMMIRDVQLEVARVVDVVSKLKDI
ADIQNKVTEEAETEFRIIMSVVDTIITSVEKIVREVKNIGDEQEEITEVMQTIAGTSQESAAVSEEVNASTESQVAHLEK
VSDTMRMLGEEMKGLEKLVAQFKVEE

Sequences:

>Translated_666_residues
MWRSLRLKISVVFSVLITLLFAILGTTVYQLQQEGAQDTLNQYSQNTMDLVTEQLHTFIQGIEEDIGHYGTNSLVQEALQ
SGLTPENEDAILKEFLHFKKNHPDILDLYIGTKDKRTLSANLAGGGALPEGYDPTSRPWYKNAEADTKSVHWGQPLYEAT
TGKLSIGVSKAIVGEDGSVLGVVAMDISLGTIQKLLHNIQYNYAGEMFIINDKNIALVYPEKVGKDVSKEPLIQSLKKDT
TKFAESKLEGNEIVAYSQLFDKMKWKIGIVYPKETIDRVLSETRNTVIGMTCMSLLVAITVSFLFARKLARPLQLLTKHV
QRVAEGDLTLKMEVMSKDEVGTLTTHFNHMVDQMNEMVSSIKHNIQTVQQSTRHLHYLTNETVAASKEVSGAMEDVTGGA
STLANGVEEVSTQLGNMTDSVEQMIESVEAIKEVTNKAEQASKQGLDTMHHLVHTRGQSSSIVDGTEEASCKLEQRVQSI
QNVVEIIKEISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKGATEEIAMMIRDVQLEVARVVDVVSKLKDI
ADIQNKVTEEAETEFRIIMSVVDTIITSVEKIVREVKNIGDEQEEITEVMQTIAGTSQESAAVSEEVNASTESQVAHLEK
VSDTMRMLGEEMKGLEKLVAQFKVEE
>Mature_666_residues
MWRSLRLKISVVFSVLITLLFAILGTTVYQLQQEGAQDTLNQYSQNTMDLVTEQLHTFIQGIEEDIGHYGTNSLVQEALQ
SGLTPENEDAILKEFLHFKKNHPDILDLYIGTKDKRTLSANLAGGGALPEGYDPTSRPWYKNAEADTKSVHWGQPLYEAT
TGKLSIGVSKAIVGEDGSVLGVVAMDISLGTIQKLLHNIQYNYAGEMFIINDKNIALVYPEKVGKDVSKEPLIQSLKKDT
TKFAESKLEGNEIVAYSQLFDKMKWKIGIVYPKETIDRVLSETRNTVIGMTCMSLLVAITVSFLFARKLARPLQLLTKHV
QRVAEGDLTLKMEVMSKDEVGTLTTHFNHMVDQMNEMVSSIKHNIQTVQQSTRHLHYLTNETVAASKEVSGAMEDVTGGA
STLANGVEEVSTQLGNMTDSVEQMIESVEAIKEVTNKAEQASKQGLDTMHHLVHTRGQSSSIVDGTEEASCKLEQRVQSI
QNVVEIIKEISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKGATEEIAMMIRDVQLEVARVVDVVSKLKDI
ADIQNKVTEEAETEFRIIMSVVDTIITSVEKIVREVKNIGDEQEEITEVMQTIAGTSQESAAVSEEVNASTESQVAHLEK
VSDTMRMLGEEMKGLEKLVAQFKVEE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=368, Percent_Identity=29.8913043478261, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1788195, Length=319, Percent_Identity=29.153605015674, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI2367378, Length=317, Percent_Identity=30.5993690851735, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1788194, Length=308, Percent_Identity=27.2727272727273, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1789453, Length=255, Percent_Identity=29.4117647058824, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 73595; Mature: 73595

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRSLRLKISVVFSVLITLLFAILGTTVYQLQQEGAQDTLNQYSQNTMDLVTEQLHTFIQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEEDIGHYGTNSLVQEALQSGLTPENEDAILKEFLHFKKNHPDILDLYIGTKDKRTLSA
HHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEE
NLAGGGALPEGYDPTSRPWYKNAEADTKSVHWGQPLYEATTGKLSIGVSKAIVGEDGSVL
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECHHHHEECCCCCEE
GVVAMDISLGTIQKLLHNIQYNYAGEMFIINDKNIALVYPEKVGKDVSKEPLIQSLKKDT
EEHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCHHHCCCCCHHHHHHHHHHHH
TKFAESKLEGNEIVAYSQLFDKMKWKIGIVYPKETIDRVLSETRNTVIGMTCMSLLVAIT
HHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFLFARKLARPLQLLTKHVQRVAEGDLTLKMEVMSKDEVGTLTTHFNHMVDQMNEMVSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
IKHNIQTVQQSTRHLHYLTNETVAASKEVSGAMEDVTGGASTLANGVEEVSTQLGNMTDS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
VEQMIESVEAIKEVTNKAEQASKQGLDTMHHLVHTRGQSSSIVDGTEEASCKLEQRVQSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
QNVVEIIKEISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKGATEEIAMMI
HHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
RDVQLEVARVVDVVSKLKDIADIQNKVTEEAETEFRIIMSVVDTIITSVEKIVREVKNIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEQEEITEVMQTIAGTSQESAAVSEEVNASTESQVAHLEKVSDTMRMLGEEMKGLEKLVA
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFKVEE
HHCCCC
>Mature Secondary Structure
MWRSLRLKISVVFSVLITLLFAILGTTVYQLQQEGAQDTLNQYSQNTMDLVTEQLHTFIQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEEDIGHYGTNSLVQEALQSGLTPENEDAILKEFLHFKKNHPDILDLYIGTKDKRTLSA
HHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEE
NLAGGGALPEGYDPTSRPWYKNAEADTKSVHWGQPLYEATTGKLSIGVSKAIVGEDGSVL
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECHHHHEECCCCCEE
GVVAMDISLGTIQKLLHNIQYNYAGEMFIINDKNIALVYPEKVGKDVSKEPLIQSLKKDT
EEHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCHHHCCCCCHHHHHHHHHHHH
TKFAESKLEGNEIVAYSQLFDKMKWKIGIVYPKETIDRVLSETRNTVIGMTCMSLLVAIT
HHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFLFARKLARPLQLLTKHVQRVAEGDLTLKMEVMSKDEVGTLTTHFNHMVDQMNEMVSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
IKHNIQTVQQSTRHLHYLTNETVAASKEVSGAMEDVTGGASTLANGVEEVSTQLGNMTDS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
VEQMIESVEAIKEVTNKAEQASKQGLDTMHHLVHTRGQSSSIVDGTEEASCKLEQRVQSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
QNVVEIIKEISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKGATEEIAMMI
HHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
RDVQLEVARVVDVVSKLKDIADIQNKVTEEAETEFRIIMSVVDTIITSVEKIVREVKNIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEQEEITEVMQTIAGTSQESAAVSEEVNASTESQVAHLEKVSDTMRMLGEEMKGLEKLVA
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFKVEE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]