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The map label for this gene is ysmA [H]

Identifier: 152976913

GI number: 152976913

Start: 3281170

End: 3281619

Strand: Reverse

Name: ysmA [H]

Synonym: Bcer98_3214

Alternate gene names: 152976913

Gene position: 3281619-3281170 (Counterclockwise)

Preceding gene: 152976914

Following gene: 152976911

Centisome position: 80.29

GC content: 34.22

Gene sequence:

>450_bases
ATGAAGCAAATTTCGTATATCGAAGATTTTGAGAAATGGGAATGTGGTTTTTCATTTTATATTCCTGTGAAAGTTCGTTT
TGGTGAAACCGATATGTTTGGCCATATGAATAACAGTGTAGCGTTTACGTATTTTGAAGAAGCTCGGATTGAATTTTTTA
AAGAGCTTGGTTTTATGCAAGAGTGGACGCATAAGTCATCTGAAACAATGATTGTAGTTGCGGATCTTCAGTGTAATTTT
TTGAAGCAAATTTTCTTTGATGAACACTTAAAAGTATATGTAAAAGCTGGAGCAGTGGGAAATTCATCATTGGACTTACA
CTATATGGTGAAAAATGAGTCTGGAGAAATTTGTTTAGTGGGCCGTGGAGCAATGGTACAAGTGTCTAAGAAAACAGGAA
AAGGAGAATCATGGTTTAAGGAATGGAAGCAAAAATTATTGCAAAAATAA

Upstream 100 bases:

>100_bases
AATAAATATTGCCTCTTCGATTTGAAGAGGCAATATTTATATAGATGCTTTTTTGAACTGACTTTAAAATTTTCTGTTTA
TTCAAAAAGGAGAGTTGATT

Downstream 100 bases:

>100_bases
AGAGAGCGATTTCGCTCTCTTTATTTTTTATCATCCATTGCTTCTTCTAATGTTAAGTGGTGTTTATATAAGTATGTAGC
ATACGGATTCCCAACATAGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKQISYIEDFEKWECGFSFYIPVKVRFGETDMFGHMNNSVAFTYFEEARIEFFKELGFMQEWTHKSSETMIVVADLQCNF
LKQIFFDEHLKVYVKAGAVGNSSLDLHYMVKNESGEICLVGRGAMVQVSKKTGKGESWFKEWKQKLLQK

Sequences:

>Translated_149_residues
MKQISYIEDFEKWECGFSFYIPVKVRFGETDMFGHMNNSVAFTYFEEARIEFFKELGFMQEWTHKSSETMIVVADLQCNF
LKQIFFDEHLKVYVKAGAVGNSSLDLHYMVKNESGEICLVGRGAMVQVSKKTGKGESWFKEWKQKLLQK
>Mature_149_residues
MKQISYIEDFEKWECGFSFYIPVKVRFGETDMFGHMNNSVAFTYFEEARIEFFKELGFMQEWTHKSSETMIVVADLQCNF
LKQIFFDEHLKVYVKAGAVGNSSLDLHYMVKNESGEICLVGRGAMVQVSKKTGKGESWFKEWKQKLLQK

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17442; Mature: 17442

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQISYIEDFEKWECGFSFYIPVKVRFGETDMFGHMNNSVAFTYFEEARIEFFKELGFMQ
CCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHH
EWTHKSSETMIVVADLQCNFLKQIFFDEHLKVYVKAGAVGNSSLDLHYMVKNESGEICLV
HHCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
GRGAMVQVSKKTGKGESWFKEWKQKLLQK
ECCCEEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQISYIEDFEKWECGFSFYIPVKVRFGETDMFGHMNNSVAFTYFEEARIEFFKELGFMQ
CCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHH
EWTHKSSETMIVVADLQCNFLKQIFFDEHLKVYVKAGAVGNSSLDLHYMVKNESGEICLV
HHCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
GRGAMVQVSKKTGKGESWFKEWKQKLLQK
ECCCEEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3114423; 8969504; 9384377 [H]