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The map label for this gene is gerM [H]

Identifier: 152976903

GI number: 152976903

Start: 3272270

End: 3273316

Strand: Reverse

Name: gerM [H]

Synonym: Bcer98_3203

Alternate gene names: 152976903

Gene position: 3273316-3272270 (Counterclockwise)

Preceding gene: 152976904

Following gene: 152976902

Centisome position: 80.09

GC content: 36.29

Gene sequence:

>1047_bases
ATGCCAAAATCCACTTTCAAATGGCTTGCTTGTGTTACGGTAAGCACAGCATTGTTATCTGGGTGTGGTTTGCTAAATAA
GGAGAACGAAATAGAACAGATTGATCCGCCAAAGAAAGTTTCCTACACAGACGGAGGAAAGAAAGAAGTAACAATGAAAG
AAAAGCAAGGACAAACTATACAAAGAGAATTGTACCTTGTTGATAAAAATGGTTATGTCGTACCACAAACTTTAGCGTTG
CCTATTCCAAAACAAAGTGAAGTTGTGAAACAAACGTTAGAATATCTTGTGAAGGATGGTCCAGTAGAAAATATATTACC
AAATGGATTTCGAGCAGTTTTACCAGCAGACACAACTATGACAGTTGATTTGAAAAAAGATGGGACAGCGGTTATTGATT
TTTCAAAGGAAATGCAAAACTATAAAAAAGAAGAAGAACGTCAAATCGTTGAATCCGTTGCATGGACGTTGACGCAATTT
AAAGATATTAAACAGGTGAAGTTTCAAATGAACGGAGAGAAATTAACAAAGATGCCTGTTGGAGGAACCCCGCTTGGTGA
GAGTGTGAGCCGTGCTGACGGTATTAATTTTGATGATGAACAAATAACAGATGTAACGAATACAAAGCCTGTGACACTTT
ATTTTATGGCGCAAAATAATAAAAGGCAGTACTATGTACCAGTAACGCGCCGCGTTGCGGAAGAGAAAGAAAATGAAGTG
GAAACGATAATCAATGAACTTGTGAAAGGACCATCGCATTCTTCCTTGTTAAATGACTTTAATCCTGGGGTAAAACTCGT
TAGTGAACCGAAAATACAAGATGGAAAGGTGACGTTAAACTTTAACGAAAATATATATGCAAATAAAGATAAAAATATGA
TTTCGAACTATGTGTTGCAGTCTCTCGTTTTATCTTTAACGGAAAAGCAAGGGGTAAAGAATGTATCTGTTGAAGTAAAT
GGGAAAGCCAATCTTATGAATGAAGAAGGAGAAAAATTAATAAAACCTGTTCAACGACCACAAAACGTGAATACTGGTAG
TTTTTAA

Upstream 100 bases:

>100_bases
TATTGGATCGATAATGATAAGAGAAGTTGTGATTGCGTGTTCTAAAAGATAACAGGCTTGTATACATATAGTACAAACTT
AGATTTTAGGGGGAATTAGT

Downstream 100 bases:

>100_bases
TCATCAATAATTTGATATACTTATGTAAGAAAGGGGAATGTCTTTTTTGAATTCCCCTTCTTCTATTGTTATACATATCC
TACATTTAAATTTGGCTATA

Product: germination protein GerM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MPKSTFKWLACVTVSTALLSGCGLLNKENEIEQIDPPKKVSYTDGGKKEVTMKEKQGQTIQRELYLVDKNGYVVPQTLAL
PIPKQSEVVKQTLEYLVKDGPVENILPNGFRAVLPADTTMTVDLKKDGTAVIDFSKEMQNYKKEEERQIVESVAWTLTQF
KDIKQVKFQMNGEKLTKMPVGGTPLGESVSRADGINFDDEQITDVTNTKPVTLYFMAQNNKRQYYVPVTRRVAEEKENEV
ETIINELVKGPSHSSLLNDFNPGVKLVSEPKIQDGKVTLNFNENIYANKDKNMISNYVLQSLVLSLTEKQGVKNVSVEVN
GKANLMNEEGEKLIKPVQRPQNVNTGSF

Sequences:

>Translated_348_residues
MPKSTFKWLACVTVSTALLSGCGLLNKENEIEQIDPPKKVSYTDGGKKEVTMKEKQGQTIQRELYLVDKNGYVVPQTLAL
PIPKQSEVVKQTLEYLVKDGPVENILPNGFRAVLPADTTMTVDLKKDGTAVIDFSKEMQNYKKEEERQIVESVAWTLTQF
KDIKQVKFQMNGEKLTKMPVGGTPLGESVSRADGINFDDEQITDVTNTKPVTLYFMAQNNKRQYYVPVTRRVAEEKENEV
ETIINELVKGPSHSSLLNDFNPGVKLVSEPKIQDGKVTLNFNENIYANKDKNMISNYVLQSLVLSLTEKQGVKNVSVEVN
GKANLMNEEGEKLIKPVQRPQNVNTGSF
>Mature_347_residues
PKSTFKWLACVTVSTALLSGCGLLNKENEIEQIDPPKKVSYTDGGKKEVTMKEKQGQTIQRELYLVDKNGYVVPQTLALP
IPKQSEVVKQTLEYLVKDGPVENILPNGFRAVLPADTTMTVDLKKDGTAVIDFSKEMQNYKKEEERQIVESVAWTLTQFK
DIKQVKFQMNGEKLTKMPVGGTPLGESVSRADGINFDDEQITDVTNTKPVTLYFMAQNNKRQYYVPVTRRVAEEKENEVE
TIINELVKGPSHSSLLNDFNPGVKLVSEPKIQDGKVTLNFNENIYANKDKNMISNYVLQSLVLSLTEKQGVKNVSVEVNG
KANLMNEEGEKLIKPVQRPQNVNTGSF

Specific function: Unknown. Affects both sporulation and germination [H]

COG id: COG5401

COG function: function code R; Spore germination protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019606 [H]

Pfam domain/function: PF10646 Germane [H]

EC number: NA

Molecular weight: Translated: 39023; Mature: 38892

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSTFKWLACVTVSTALLSGCGLLNKENEIEQIDPPKKVSYTDGGKKEVTMKEKQGQTI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEHHHCCCEE
QRELYLVDKNGYVVPQTLALPIPKQSEVVKQTLEYLVKDGPVENILPNGFRAVLPADTTM
EEEEEEECCCCEECCCEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCEE
TVDLKKDGTAVIDFSKEMQNYKKEEERQIVESVAWTLTQFKDIKQVKFQMNGEKLTKMPV
EEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCC
GGTPLGESVSRADGINFDDEQITDVTNTKPVTLYFMAQNNKRQYYVPVTRRVAEEKENEV
CCCCCCCHHHHHCCCCCCHHHHCCCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHH
ETIINELVKGPSHSSLLNDFNPGVKLVSEPKIQDGKVTLNFNENIYANKDKNMISNYVLQ
HHHHHHHHCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCEEECCCHHHHHHHHHH
SLVLSLTEKQGVKNVSVEVNGKANLMNEEGEKLIKPVQRPQNVNTGSF
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PKSTFKWLACVTVSTALLSGCGLLNKENEIEQIDPPKKVSYTDGGKKEVTMKEKQGQTI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEHHHCCCEE
QRELYLVDKNGYVVPQTLALPIPKQSEVVKQTLEYLVKDGPVENILPNGFRAVLPADTTM
EEEEEEECCCCEECCCEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCEE
TVDLKKDGTAVIDFSKEMQNYKKEEERQIVESVAWTLTQFKDIKQVKFQMNGEKLTKMPV
EEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCC
GGTPLGESVSRADGINFDDEQITDVTNTKPVTLYFMAQNNKRQYYVPVTRRVAEEKENEV
CCCCCCCHHHHHCCCCCCHHHHCCCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHH
ETIINELVKGPSHSSLLNDFNPGVKLVSEPKIQDGKVTLNFNENIYANKDKNMISNYVLQ
HHHHHHHHCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCEEECCCHHHHHHHHHH
SLVLSLTEKQGVKNVSVEVNGKANLMNEEGEKLIKPVQRPQNVNTGSF
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 2846748 [H]