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The map label for this gene is yrrN [H]

Identifier: 152976797

GI number: 152976797

Start: 3136871

End: 3137800

Strand: Reverse

Name: yrrN [H]

Synonym: Bcer98_3095

Alternate gene names: 152976797

Gene position: 3137800-3136871 (Counterclockwise)

Preceding gene: 152976798

Following gene: 152976796

Centisome position: 76.77

GC content: 35.16

Gene sequence:

>930_bases
ATGAAAAAACCTGAATTGTTAGTAACACCAAGAGTGATTGCAGATATTGAACCTCTTGCGAAGGCAGGGGCAGATGCGGT
TATAATTGGTGAACAAGAGTTTGGCTTACGATTAGCTGGTGAGTTTTCTCGTGAAGATGTGAAGCAAGCTGTAAATATTG
CGCATGAGCACGATATGAAAGTTTATGTAGCGATGAATGCTGTGTTTCACAATGAAAAAGTAGAAGCTTTAAAAGACTAT
GTTTCATTTTTACGAGATGTACAAGTAGATGCGATTGTTTTTGGAGATCCAGCTGTACTTATGACAGCTCGTGAAGTAGC
ACCGAACATGCCGTTGCATTGGAATACAGAAACGACGGCAACGAACTGGTTTTCATGTAATTATTGGGGACGTAAAGGGG
CAAAACGTGCTGTGCTCGCACGTGAGTTAAGTTTAGATGAAATTATTGAATTAAAAGAACATGCAGAGGTAGAAGTAGAA
GTACAAATTCACGGTATGACATGTATGTTTCAATCAAAACGCTCACTAGTTGGGAACTACTTTGAATATCAAGGACGTCA
TTTGGAAATTGAAAAGAAAAAATACGAAGAAAATATGTTTTTATATGATAAAGAACGTAATAATAAATACCCAATTTATG
AAGATGCAAATGGTACGCATATTATGAGTCCAAATGATATTTGCTTTATTGATGAATTAGATGAACTAATCGATGCAGAA
ATAGATTGCTTAAAAATTGATGGTGTATTAAAAAGCTCTGAATATATTGTTGAGGTTACAAAGAAATACCGTAAAGCAAT
TGATTTATGTGTAGAAGATCGCGATGCGTATTATGACATAAAAGACAATTTATATAAAGAGATAGAAGAGATGCAACCAG
TAAATCGTCCGCTTGATACAGGATTCTTCTTTAAAGAAACGGTTTACTAA

Upstream 100 bases:

>100_bases
ACGTATAATGAATGGCTTATGAACCATAAGGGATATGATACGACAATTTTCCCGATTGGTGACGGAGTAGCAGTGAGCAA
AAAGAAAGGATGACAAAGGT

Downstream 100 bases:

>100_bases
ACGAGGAGGGTGTAGAATATGACAATGCAAGAAATTTCACGAGTAATTGATGGCAAGCGCGTTATTGTGAAGAAACCTGA
ATTGTTAATCCCAGCAGGAA

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKKPELLVTPRVIADIEPLAKAGADAVIIGEQEFGLRLAGEFSREDVKQAVNIAHEHDMKVYVAMNAVFHNEKVEALKDY
VSFLRDVQVDAIVFGDPAVLMTAREVAPNMPLHWNTETTATNWFSCNYWGRKGAKRAVLARELSLDEIIELKEHAEVEVE
VQIHGMTCMFQSKRSLVGNYFEYQGRHLEIEKKKYEENMFLYDKERNNKYPIYEDANGTHIMSPNDICFIDELDELIDAE
IDCLKIDGVLKSSEYIVEVTKKYRKAIDLCVEDRDAYYDIKDNLYKEIEEMQPVNRPLDTGFFFKETVY

Sequences:

>Translated_309_residues
MKKPELLVTPRVIADIEPLAKAGADAVIIGEQEFGLRLAGEFSREDVKQAVNIAHEHDMKVYVAMNAVFHNEKVEALKDY
VSFLRDVQVDAIVFGDPAVLMTAREVAPNMPLHWNTETTATNWFSCNYWGRKGAKRAVLARELSLDEIIELKEHAEVEVE
VQIHGMTCMFQSKRSLVGNYFEYQGRHLEIEKKKYEENMFLYDKERNNKYPIYEDANGTHIMSPNDICFIDELDELIDAE
IDCLKIDGVLKSSEYIVEVTKKYRKAIDLCVEDRDAYYDIKDNLYKEIEEMQPVNRPLDTGFFFKETVY
>Mature_309_residues
MKKPELLVTPRVIADIEPLAKAGADAVIIGEQEFGLRLAGEFSREDVKQAVNIAHEHDMKVYVAMNAVFHNEKVEALKDY
VSFLRDVQVDAIVFGDPAVLMTAREVAPNMPLHWNTETTATNWFSCNYWGRKGAKRAVLARELSLDEIIELKEHAEVEVE
VQIHGMTCMFQSKRSLVGNYFEYQGRHLEIEKKKYEENMFLYDKERNNKYPIYEDANGTHIMSPNDICFIDELDELIDAE
IDCLKIDGVLKSSEYIVEVTKKYRKAIDLCVEDRDAYYDIKDNLYKEIEEMQPVNRPLDTGFFFKETVY

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=355, Percent_Identity=29.5774647887324, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI87081910, Length=270, Percent_Identity=27.7777777777778, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789548, Length=297, Percent_Identity=26.2626262626263, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 35771; Mature: 35771

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPELLVTPRVIADIEPLAKAGADAVIIGEQEFGLRLAGEFSREDVKQAVNIAHEHDMK
CCCCCEEECCHHHHCCHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCE
VYVAMNAVFHNEKVEALKDYVSFLRDVQVDAIVFGDPAVLMTAREVAPNMPLHWNTETTA
EEEEEEEHHCCHHHHHHHHHHHHHHHCCEEEEEECCCHHEEEEHHHCCCCCEEECCCCCC
TNWFSCNYWGRKGAKRAVLARELSLDEIIELKEHAEVEVEVQIHGMTCMFQSKRSLVGNY
CCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHCCCEEEEEEEECEEEEEHHHHHHHHHH
FEYQGRHLEIEKKKYEENMFLYDKERNNKYPIYEDANGTHIMSPNDICFIDELDELIDAE
HHHCCCEEEEEHHHCCCCEEEEECCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHCCC
IDCLKIDGVLKSSEYIVEVTKKYRKAIDLCVEDRDAYYDIKDNLYKEIEEMQPVNRPLDT
CEEEEECCEECCCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHCCCCCCCCC
GFFFKETVY
CCEEEECCC
>Mature Secondary Structure
MKKPELLVTPRVIADIEPLAKAGADAVIIGEQEFGLRLAGEFSREDVKQAVNIAHEHDMK
CCCCCEEECCHHHHCCHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCE
VYVAMNAVFHNEKVEALKDYVSFLRDVQVDAIVFGDPAVLMTAREVAPNMPLHWNTETTA
EEEEEEEHHCCHHHHHHHHHHHHHHHCCEEEEEECCCHHEEEEHHHCCCCCEEECCCCCC
TNWFSCNYWGRKGAKRAVLARELSLDEIIELKEHAEVEVEVQIHGMTCMFQSKRSLVGNY
CCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHCCCEEEEEEEECEEEEEHHHHHHHHHH
FEYQGRHLEIEKKKYEENMFLYDKERNNKYPIYEDANGTHIMSPNDICFIDELDELIDAE
HHHCCCEEEEEHHHCCCCEEEEECCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHCCC
IDCLKIDGVLKSSEYIVEVTKKYRKAIDLCVEDRDAYYDIKDNLYKEIEEMQPVNRPLDT
CEEEEECCEECCCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHCCCCCCCCC
GFFFKETVY
CCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]