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The map label for this gene is yrrO [H]

Identifier: 152976796

GI number: 152976796

Start: 3135572

End: 3136852

Strand: Reverse

Name: yrrO [H]

Synonym: Bcer98_3094

Alternate gene names: 152976796

Gene position: 3136852-3135572 (Counterclockwise)

Preceding gene: 152976797

Following gene: 152976795

Centisome position: 76.75

GC content: 37.55

Gene sequence:

>1281_bases
ATGACAATGCAAGAAATTTCACGAGTAATTGATGGCAAGCGCGTTATTGTGAAGAAACCTGAATTGTTAATCCCAGCAGG
AAATTTAGAGAAATTAAAAATAGCTATCCATTACGGTGCAGATGCTGTATATTTAGGTGGGCAAGAATTTGGTCTTCGTT
CCAATGCTGGAAACTTCACATTAGAAGAGATGGCAGAAGGCGTTGAATTTGCTAAGAAATATGGTGCAAAGATATATGTA
ACAACAAATATTTTTGCACATAATGAGAACATGGAAGGGCTAGAAGAATATTTAAGAGGCATTGAAAAAGCTGGTGTAAC
AGGTATTATCGTTGCAGACCCTCTTATTATTGAAACATGTAAGCGGGTCGCACCTTCTGTTGAAGTACATTTAAGTACGC
AACAATCACTATCTAACTGGAAAGCAGCGCAATATTGGAAAGAGGAAGGATTACATCGCCTTGTATTAGCGCGTGAAGTT
GGATATGAAGAAATGAAAGAAATAAAAGAACACGTTGATATTGAAATTGAGGCATTTGTCCATGGGGCAATGTGTATTGC
GTATTCTGGAAGATGTACATTAAGTAACCATATGACAGCACGCGACTCTAACCGCGGTGGTTGTTGCCAATCTTGTCGCT
GGGATTACGACTTAATTCAAACAGTCTCCCAACATAAAGATGCACAAGAATTATCGTTGTTCCAAGAAGGAGATGCTCCT
TTCGCGATGAGTCCGAAAGATTTAAATTTAATTCTTTCGATTCCAAAAATGATTGAGATCGGAATTGACAGCTTAAAAGT
TGAAGGACGTATGAAATCTATCCATTACATTGCAACTGTAGCAACGGTATATCGTAAAGTAATCGATACGTACTGCGCAG
ATCCTGATAATTTTGAATTTAAACAAGAATGGTTAGACGAATTGGATAAATGTGCAAATCGTGACACAGCTCCAGCTTTC
TTTGAAGGTGTACCAGGATATCAAGAACAAATGTATGGAAATCATAGTAAGAAAACAACGTATGATTTTGCTGGTTTAGT
GTTAGATTATAATGAAGAAACAGGCATTGCAACAATCGAACAACGTAATTATTTTAAACCAGGCCATGAAGTGGAGTTCT
TTGGACCAGAAATAGAAAACTTTACACAAACGGTGGAGAAAATTTGGGATGAGGATGGAAATGAATTAGATGCAGCAAGA
CACCCGCTGCAAATCGTGAAAATCAAAGTGGATCGACCAGTGTATGTGAACAATATGATGCGCAAAAGCATATATCAATA
A

Upstream 100 bases:

>100_bases
TTTATATAAAGAGATAGAAGAGATGCAACCAGTAAATCGTCCGCTTGATACAGGATTCTTCTTTAAAGAAACGGTTTACT
AAACGAGGAGGGTGTAGAAT

Downstream 100 bases:

>100_bases
GAAAGAGTGGTAGTTGAATGGGGACGAATAAGCCTGTTGTAATTGGAATTGCTGGTGGTTCAGGATCAGGTAAGACAAGC
GTAACAAAAGCAATTTTTGA

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTMQEISRVIDGKRVIVKKPELLIPAGNLEKLKIAIHYGADAVYLGGQEFGLRSNAGNFTLEEMAEGVEFAKKYGAKIYV
TTNIFAHNENMEGLEEYLRGIEKAGVTGIIVADPLIIETCKRVAPSVEVHLSTQQSLSNWKAAQYWKEEGLHRLVLAREV
GYEEMKEIKEHVDIEIEAFVHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYDLIQTVSQHKDAQELSLFQEGDAP
FAMSPKDLNLILSIPKMIEIGIDSLKVEGRMKSIHYIATVATVYRKVIDTYCADPDNFEFKQEWLDELDKCANRDTAPAF
FEGVPGYQEQMYGNHSKKTTYDFAGLVLDYNEETGIATIEQRNYFKPGHEVEFFGPEIENFTQTVEKIWDEDGNELDAAR
HPLQIVKIKVDRPVYVNNMMRKSIYQ

Sequences:

>Translated_426_residues
MTMQEISRVIDGKRVIVKKPELLIPAGNLEKLKIAIHYGADAVYLGGQEFGLRSNAGNFTLEEMAEGVEFAKKYGAKIYV
TTNIFAHNENMEGLEEYLRGIEKAGVTGIIVADPLIIETCKRVAPSVEVHLSTQQSLSNWKAAQYWKEEGLHRLVLAREV
GYEEMKEIKEHVDIEIEAFVHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYDLIQTVSQHKDAQELSLFQEGDAP
FAMSPKDLNLILSIPKMIEIGIDSLKVEGRMKSIHYIATVATVYRKVIDTYCADPDNFEFKQEWLDELDKCANRDTAPAF
FEGVPGYQEQMYGNHSKKTTYDFAGLVLDYNEETGIATIEQRNYFKPGHEVEFFGPEIENFTQTVEKIWDEDGNELDAAR
HPLQIVKIKVDRPVYVNNMMRKSIYQ
>Mature_425_residues
TMQEISRVIDGKRVIVKKPELLIPAGNLEKLKIAIHYGADAVYLGGQEFGLRSNAGNFTLEEMAEGVEFAKKYGAKIYVT
TNIFAHNENMEGLEEYLRGIEKAGVTGIIVADPLIIETCKRVAPSVEVHLSTQQSLSNWKAAQYWKEEGLHRLVLAREVG
YEEMKEIKEHVDIEIEAFVHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYDLIQTVSQHKDAQELSLFQEGDAPF
AMSPKDLNLILSIPKMIEIGIDSLKVEGRMKSIHYIATVATVYRKVIDTYCADPDNFEFKQEWLDELDKCANRDTAPAFF
EGVPGYQEQMYGNHSKKTTYDFAGLVLDYNEETGIATIEQRNYFKPGHEVEFFGPEIENFTQTVEKIWDEDGNELDAARH
PLQIVKIKVDRPVYVNNMMRKSIYQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=421, Percent_Identity=32.541567695962, Blast_Score=211, Evalue=8e-56,
Organism=Escherichia coli, GI87081910, Length=269, Percent_Identity=37.9182156133829, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1789548, Length=314, Percent_Identity=32.1656050955414, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 48382; Mature: 48250

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQEISRVIDGKRVIVKKPELLIPAGNLEKLKIAIHYGADAVYLGGQEFGLRSNAGNFT
CCHHHHHHHHCCCEEEEECCCEEEECCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCC
LEEMAEGVEFAKKYGAKIYVTTNIFAHNENMEGLEEYLRGIEKAGVTGIIVADPLIIETC
HHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
KRVAPSVEVHLSTQQSLSNWKAAQYWKEEGLHRLVLAREVGYEEMKEIKEHVDIEIEAFV
HHHCCCEEEEECCHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCEEEEHEE
HGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYDLIQTVSQHKDAQELSLFQEGDAP
EEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCC
FAMSPKDLNLILSIPKMIEIGIDSLKVEGRMKSIHYIATVATVYRKVIDTYCADPDNFEF
CEECCCCCEEEEECHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
KQEWLDELDKCANRDTAPAFFEGVPGYQEQMYGNHSKKTTYDFAGLVLDYNEETGIATIE
HHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEEEE
QRNYFKPGHEVEFFGPEIENFTQTVEKIWDEDGNELDAARHPLQIVKIKVDRPVYVNNMM
CCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEECCCHHHHHHH
RKSIYQ
HHHHCC
>Mature Secondary Structure 
TMQEISRVIDGKRVIVKKPELLIPAGNLEKLKIAIHYGADAVYLGGQEFGLRSNAGNFT
CHHHHHHHHCCCEEEEECCCEEEECCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCC
LEEMAEGVEFAKKYGAKIYVTTNIFAHNENMEGLEEYLRGIEKAGVTGIIVADPLIIETC
HHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
KRVAPSVEVHLSTQQSLSNWKAAQYWKEEGLHRLVLAREVGYEEMKEIKEHVDIEIEAFV
HHHCCCEEEEECCHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCEEEEHEE
HGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYDLIQTVSQHKDAQELSLFQEGDAP
EEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCC
FAMSPKDLNLILSIPKMIEIGIDSLKVEGRMKSIHYIATVATVYRKVIDTYCADPDNFEF
CEECCCCCEEEEECHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
KQEWLDELDKCANRDTAPAFFEGVPGYQEQMYGNHSKKTTYDFAGLVLDYNEETGIATIE
HHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEEEE
QRNYFKPGHEVEFFGPEIENFTQTVEKIWDEDGNELDAARHPLQIVKIKVDRPVYVNNMM
CCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEECCCHHHHHHH
RKSIYQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]