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The map label for this gene is lysA [H]

Identifier: 152974010

GI number: 152974010

Start: 171791

End: 173095

Strand: Direct

Name: lysA [H]

Synonym: Bcer98_0160

Alternate gene names: 152974010

Gene position: 171791-173095 (Clockwise)

Preceding gene: 152974009

Following gene: 152974011

Centisome position: 4.2

GC content: 28.28

Gene sequence:

>1305_bases
ATGGATTTTAATAAGGAGCAAATTCTTAATATACATGAGAAACTTGAATACGTGAAGTATGATGATGAAGGTGAAATTAC
CTTCTATGGTTCAAAAATCCACGAGATATTAGGGCATAATAATTCTATGTCAATGATATATTTTGACCAAAGAATAAAGG
ATAATTATTATTCAATTTATAACGCGTTTAATAAATATTTTAAAAATGTAAGTATCCATTTTGCTCTGAAATGCAATTAT
ATACCTGCTTGTATAGAGGCGCTTTTTAAAGTTGGATGTAGTGTTGAGGTTATGAGCAGTATTGAATTACAGATTGCTCT
ACAAAATGGATTTAAGAGAAACCAAATAGTTTGTAATGGCTTAGGAAAAACAAAAGAAGAATTATTACAAGAATTAGAGA
ACAGTAAGTTGATTTTTATTGATAATATAAATGATCTAGAAAGAATTAATTCCCTATCTTTAGATTTGGGTAAAAAAATC
CCTATTGGTCTAAGAGTTTTACCTAACATAAAGAGTTCTAGTCATGAAGAAGTTATGATTAAACCTAGTTCAAAATTAGG
AATGGATATTAATACTGCAATGGAATTTTTAAAGCAGTCTAAAGAGACAAATTCTAATCTTAATATAATCGGAATACAAT
TTCATTTAATGAGTCATTTAAAAGACTGTAGCTTATATAAAGAGTATTTATCTAGTATAGAGTCTTTCTTAGAAAATGTT
TATAAAGAACTCAATTACTCCTTCCAGTATATTAATCTTGGCGGTGGTTTTGAAACTAGATTTATTATGGAAAATAATAA
TATTGATATAAGTAGTTTAGCTAAAATTGCATATGATAAATTAAAGAATCTACCATATGATTATGAACTCATTGTGGAGC
CAGGAAGATATATTATGGCGGATGCTGCAGTAATATTGGCCTCTATAATCAGTGAAAAAAAGAGTGCTGATGTGAATTGG
AAAATCACTGATATTGGTTCTAATATTCTAATACCAGTTCCTAATATTGAATATTACACAATCCCATATAAATTAAATGA
TGGTAATCAACCTTGGGAACGCTATAATGTAGGTGATGCTACATGCGCTCCTTCTCATTTATGTAAAGATGTTGAATTAC
CAAGCCAATTAGTTGAAAATAAAATAATTGTTTTAAACTGTGGTGCGTATACCTCCGTTTATAGTGAACTTTGGGCATTT
AAATTACCAGAAATATATTATTTGAAGGATGATAAAATCCATAATATATTTTCTTATAATCAATTCCGCCAATTATTTAA
ATTAGCTTATGGATACGATATCTAG

Upstream 100 bases:

>100_bases
ATTAAATTACAATGATAGCCTCTTTGAGGATATAGAATGGAATATAGAAAAAGAATTGTCCGAGGTAGTAAAAATACTAT
AACGAAACGTTGGGGGATCA

Downstream 100 bases:

>100_bases
AGAAAGAGGGTTCTGTATGTTTGCAGTTAATGTAGAAGGACTAATTATTAAAGACAGTAAATTATTGATAGGTAGAAGAA
GTTTAAATGAAGAGCATGCT

Product: Orn/DAP/Arg decarboxylase 2

Products: NA

Alternate protein names: DAP decarboxylase [H]

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MDFNKEQILNIHEKLEYVKYDDEGEITFYGSKIHEILGHNNSMSMIYFDQRIKDNYYSIYNAFNKYFKNVSIHFALKCNY
IPACIEALFKVGCSVEVMSSIELQIALQNGFKRNQIVCNGLGKTKEELLQELENSKLIFIDNINDLERINSLSLDLGKKI
PIGLRVLPNIKSSSHEEVMIKPSSKLGMDINTAMEFLKQSKETNSNLNIIGIQFHLMSHLKDCSLYKEYLSSIESFLENV
YKELNYSFQYINLGGGFETRFIMENNNIDISSLAKIAYDKLKNLPYDYELIVEPGRYIMADAAVILASIISEKKSADVNW
KITDIGSNILIPVPNIEYYTIPYKLNDGNQPWERYNVGDATCAPSHLCKDVELPSQLVENKIIVLNCGAYTSVYSELWAF
KLPEIYYLKDDKIHNIFSYNQFRQLFKLAYGYDI

Sequences:

>Translated_434_residues
MDFNKEQILNIHEKLEYVKYDDEGEITFYGSKIHEILGHNNSMSMIYFDQRIKDNYYSIYNAFNKYFKNVSIHFALKCNY
IPACIEALFKVGCSVEVMSSIELQIALQNGFKRNQIVCNGLGKTKEELLQELENSKLIFIDNINDLERINSLSLDLGKKI
PIGLRVLPNIKSSSHEEVMIKPSSKLGMDINTAMEFLKQSKETNSNLNIIGIQFHLMSHLKDCSLYKEYLSSIESFLENV
YKELNYSFQYINLGGGFETRFIMENNNIDISSLAKIAYDKLKNLPYDYELIVEPGRYIMADAAVILASIISEKKSADVNW
KITDIGSNILIPVPNIEYYTIPYKLNDGNQPWERYNVGDATCAPSHLCKDVELPSQLVENKIIVLNCGAYTSVYSELWAF
KLPEIYYLKDDKIHNIFSYNQFRQLFKLAYGYDI
>Mature_434_residues
MDFNKEQILNIHEKLEYVKYDDEGEITFYGSKIHEILGHNNSMSMIYFDQRIKDNYYSIYNAFNKYFKNVSIHFALKCNY
IPACIEALFKVGCSVEVMSSIELQIALQNGFKRNQIVCNGLGKTKEELLQELENSKLIFIDNINDLERINSLSLDLGKKI
PIGLRVLPNIKSSSHEEVMIKPSSKLGMDINTAMEFLKQSKETNSNLNIIGIQFHLMSHLKDCSLYKEYLSSIESFLENV
YKELNYSFQYINLGGGFETRFIMENNNIDISSLAKIAYDKLKNLPYDYELIVEPGRYIMADAAVILASIISEKKSADVNW
KITDIGSNILIPVPNIEYYTIPYKLNDGNQPWERYNVGDATCAPSHLCKDVELPSQLVENKIIVLNCGAYTSVYSELWAF
KLPEIYYLKDDKIHNIFSYNQFRQLFKLAYGYDI

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-II family [H]

Homologues:

Organism=Homo sapiens, GI4505489, Length=372, Percent_Identity=21.7741935483871, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17562780, Length=241, Percent_Identity=26.9709543568465, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009006
- InterPro:   IPR002986
- InterPro:   IPR022643
- InterPro:   IPR022657
- InterPro:   IPR022644
- InterPro:   IPR022653
- InterPro:   IPR000183 [H]

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]

EC number: =4.1.1.20 [H]

Molecular weight: Translated: 50084; Mature: 50084

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFNKEQILNIHEKLEYVKYDDEGEITFYGSKIHEILGHNNSMSMIYFDQRIKDNYYSIY
CCCCHHHHHHHHHHHHEEEECCCCCEEEEHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHH
NAFNKYFKNVSIHFALKCNYIPACIEALFKVGCSVEVMSSIELQIALQNGFKRNQIVCNG
HHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCCCCEEECC
LGKTKEELLQELENSKLIFIDNINDLERINSLSLDLGKKIPIGLRVLPNIKSSSHEEVMI
CCCCHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEE
KPSSKLGMDINTAMEFLKQSKETNSNLNIIGIQFHLMSHLKDCSLYKEYLSSIESFLENV
ECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKELNYSFQYINLGGGFETRFIMENNNIDISSLAKIAYDKLKNLPYDYELIVEPGRYIMA
HHHCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEHH
DAAVILASIISEKKSADVNWKITDIGSNILIPVPNIEYYTIPYKLNDGNQPWERYNVGDA
HHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCEEEEEEEEECCCCCCHHHCCCCCC
TCAPSHLCKDVELPSQLVENKIIVLNCGAYTSVYSELWAFKLPEIYYLKDDKIHNIFSYN
CCCHHHHHCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
QFRQLFKLAYGYDI
HHHHHHHHHHCCCC
>Mature Secondary Structure
MDFNKEQILNIHEKLEYVKYDDEGEITFYGSKIHEILGHNNSMSMIYFDQRIKDNYYSIY
CCCCHHHHHHHHHHHHEEEECCCCCEEEEHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHH
NAFNKYFKNVSIHFALKCNYIPACIEALFKVGCSVEVMSSIELQIALQNGFKRNQIVCNG
HHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCCCCEEECC
LGKTKEELLQELENSKLIFIDNINDLERINSLSLDLGKKIPIGLRVLPNIKSSSHEEVMI
CCCCHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEE
KPSSKLGMDINTAMEFLKQSKETNSNLNIIGIQFHLMSHLKDCSLYKEYLSSIESFLENV
ECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKELNYSFQYINLGGGFETRFIMENNNIDISSLAKIAYDKLKNLPYDYELIVEPGRYIMA
HHHCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEHH
DAAVILASIISEKKSADVNWKITDIGSNILIPVPNIEYYTIPYKLNDGNQPWERYNVGDA
HHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCEEEEEEEEECCCCCCHHHCCCCCC
TCAPSHLCKDVELPSQLVENKIIVLNCGAYTSVYSELWAFKLPEIYYLKDDKIHNIFSYN
CCCHHHHHCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
QFRQLFKLAYGYDI
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]