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The map label for this gene is ybbR [H]

Identifier: 152974001

GI number: 152974001

Start: 161060

End: 162505

Strand: Direct

Name: ybbR [H]

Synonym: Bcer98_0149

Alternate gene names: 152974001

Gene position: 161060-162505 (Clockwise)

Preceding gene: 152974000

Following gene: 152974002

Centisome position: 3.94

GC content: 36.58

Gene sequence:

>1446_bases
ATGGATAAGTTAATGGAGAACCATTGGTTTTTAAAAGGAATCTCATTACTATTGGCGTTGATGCTTTTTATGTCAACAAC
CATAACAGAAAAGAATAATACTGCCAATATATCACCTTTTGCTGGTGATACAAAAGAAACGTTAACGGACTGCCCTATCA
AAGTAGATTATGACACAGACAAATACATTGTTACCGGTATCCCAAGTCAAGTAAAGGTGAAATTAGAGGGATCTAAGGCC
TCTGTTGCTGCTATAAAAGCCAAAAATAAAGTTGAGATTCCCGTGGATTTACGCGGTTACAAAAAGGGAACATATGAAGT
TCCGCTTAAAGCGGTGAATCTTCCGAGTAATGTAAAGGCAACTGTTCAACCATCTAAAATTAAAGTTGCCATTTATAATA
AAGCGAAAAAGTATGTTTCTGTAGATATGAAGTTGTCCAATGAAGATCGATTGCAGTCTGGTGTGAGCATTGATAGAGCC
GCTCTGAAACCGAAACCTGATACAGTTGAGGTAGTGGGAACGGAAGAGGAAATAGATAGCATTGCTTCTGCTCAAGCATA
TGTTGATGTAAAAGATATTAACAAAACAGTCACAAAAGAAGCGGAAGTTATGATATATGATAAAAATGGAAAACGTTTAT
ATTTAAAAACGAGTCCTTCTAAGGTAAGTGTGACGGTTCCGGTTGTTGCACAAACGGGAGAAAATTCTAGTGAAAAAACC
GTACCGCTAAACTATATAAAAAAAGGAAATGTGCCAGAAGGTTTAGCGGTTACGAATATCAGTCTTCAACCGAGCGAAGT
GACAATTTCGGGTCCAAAAGACGTTTTGGATAATATAAAAACAATAGAGGGGGTCGAAGTAGACTTGAGTAAAATAACAG
AGTCTACAACATTCGATGCCTCTGTTTTATTACCAAAAGGTGTCACGAGCGCAAAGCCTAACCAAGTAAAGGTCTCTGTT
CATGTACACGCGCAGAAAGAACAAACAAAACATAAGACAGTTGATGGTATTCCAATTCAAAAAAATGGTCTTGCAAATGA
TATGACTGCGCAAATCATTTTCCCGCAAAGCGGAAAGATCAGTGTTGATATTTCAGGAGAAGCTAGTATAGTAGAAAAAA
TAACAGCGGCACAAATAACAGCTGTAATAAATCTACAAGGTTTGTCTTCAGGAACACACGATGTTTCCATTCAAGTTAGT
GGTCCAAGTAATGTTTCAATAAATGCAAAACAAAAAAGTGCAAAGGTTACTCTTGGAAAGAAAGAACAACCAAATAAAGA
AGTACAAGGTAACATAGAGCAATCTAATTCACAAAAAGGAAACGAAAGTGAAGCAGAAAAGTCAAAAGAGCAAGATAAAG
AAACAGAACAAAATAATGGGACAGGAAAAGAAAATACAACAGAGGAACCAAAAGAGCAAGATAAAGGAGAGAATAGTAAT
GGGTAA

Upstream 100 bases:

>100_bases
GTAGAGCAGTTGAAAGAAATGCTTTTGGCAGAGTTTAGTGGTGGTGATATGAAGACAACTTCTTCATCTTTATGGAATTG
GAATTGGAGGAGAAAACGTC

Downstream 100 bases:

>100_bases
ATATTTTGGAACAGATGGTGTACGCGGTGTTGCAAATAAGGAATTAACACCAGAATTAGCATTTAAAATCGGTCGCTTTG
GTGGTTATGTATTAACAAAA

Product: YbbR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MDKLMENHWFLKGISLLLALMLFMSTTITEKNNTANISPFAGDTKETLTDCPIKVDYDTDKYIVTGIPSQVKVKLEGSKA
SVAAIKAKNKVEIPVDLRGYKKGTYEVPLKAVNLPSNVKATVQPSKIKVAIYNKAKKYVSVDMKLSNEDRLQSGVSIDRA
ALKPKPDTVEVVGTEEEIDSIASAQAYVDVKDINKTVTKEAEVMIYDKNGKRLYLKTSPSKVSVTVPVVAQTGENSSEKT
VPLNYIKKGNVPEGLAVTNISLQPSEVTISGPKDVLDNIKTIEGVEVDLSKITESTTFDASVLLPKGVTSAKPNQVKVSV
HVHAQKEQTKHKTVDGIPIQKNGLANDMTAQIIFPQSGKISVDISGEASIVEKITAAQITAVINLQGLSSGTHDVSIQVS
GPSNVSINAKQKSAKVTLGKKEQPNKEVQGNIEQSNSQKGNESEAEKSKEQDKETEQNNGTGKENTTEEPKEQDKGENSN
G

Sequences:

>Translated_481_residues
MDKLMENHWFLKGISLLLALMLFMSTTITEKNNTANISPFAGDTKETLTDCPIKVDYDTDKYIVTGIPSQVKVKLEGSKA
SVAAIKAKNKVEIPVDLRGYKKGTYEVPLKAVNLPSNVKATVQPSKIKVAIYNKAKKYVSVDMKLSNEDRLQSGVSIDRA
ALKPKPDTVEVVGTEEEIDSIASAQAYVDVKDINKTVTKEAEVMIYDKNGKRLYLKTSPSKVSVTVPVVAQTGENSSEKT
VPLNYIKKGNVPEGLAVTNISLQPSEVTISGPKDVLDNIKTIEGVEVDLSKITESTTFDASVLLPKGVTSAKPNQVKVSV
HVHAQKEQTKHKTVDGIPIQKNGLANDMTAQIIFPQSGKISVDISGEASIVEKITAAQITAVINLQGLSSGTHDVSIQVS
GPSNVSINAKQKSAKVTLGKKEQPNKEVQGNIEQSNSQKGNESEAEKSKEQDKETEQNNGTGKENTTEEPKEQDKGENSN
G
>Mature_481_residues
MDKLMENHWFLKGISLLLALMLFMSTTITEKNNTANISPFAGDTKETLTDCPIKVDYDTDKYIVTGIPSQVKVKLEGSKA
SVAAIKAKNKVEIPVDLRGYKKGTYEVPLKAVNLPSNVKATVQPSKIKVAIYNKAKKYVSVDMKLSNEDRLQSGVSIDRA
ALKPKPDTVEVVGTEEEIDSIASAQAYVDVKDINKTVTKEAEVMIYDKNGKRLYLKTSPSKVSVTVPVVAQTGENSSEKT
VPLNYIKKGNVPEGLAVTNISLQPSEVTISGPKDVLDNIKTIEGVEVDLSKITESTTFDASVLLPKGVTSAKPNQVKVSV
HVHAQKEQTKHKTVDGIPIQKNGLANDMTAQIIFPQSGKISVDISGEASIVEKITAAQITAVINLQGLSSGTHDVSIQVS
GPSNVSINAKQKSAKVTLGKKEQPNKEVQGNIEQSNSQKGNESEAEKSKEQDKETEQNNGTGKENTTEEPKEQDKGENSN
G

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 51958; Mature: 51958

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLMENHWFLKGISLLLALMLFMSTTITEKNNTANISPFAGDTKETLTDCPIKVDYDTD
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEECCCCCCCHHHHHCCCEEEECCCC
KYIVTGIPSQVKVKLEGSKASVAAIKAKNKVEIPVDLRGYKKGTYEVPLKAVNLPSNVKA
CEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCEECCEEEECCCCCCEE
TVQPSKIKVAIYNKAKKYVSVDMKLSNEDRLQSGVSIDRAALKPKPDTVEVVGTEEEIDS
EECCCEEEEEEEECCCEEEEEEEEECCHHHHHCCCCCCHHHCCCCCCEEEEEECHHHHHH
IASAQAYVDVKDINKTVTKEAEVMIYDKNGKRLYLKTSPSKVSVTVPVVAQTGENSSEKT
HHHHHEEEEHHHCCHHHCCCEEEEEEECCCCEEEEEECCCEEEEEEEEEEECCCCCCCCE
VPLNYIKKGNVPEGLAVTNISLQPSEVTISGPKDVLDNIKTIEGVEVDLSKITESTTFDA
EEHEEEECCCCCCCEEEEEEEECCCEEEECCCHHHHHCHHHCCCCEEEHHHHCCCCCCCE
SVLLPKGVTSAKPNQVKVSVHVHAQKEQTKHKTVDGIPIQKNGLANDMTAQIIFPQSGKI
EEEECCCCCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEE
SVDISGEASIVEKITAAQITAVINLQGLSSGTHDVSIQVSGPSNVSINAKQKSAKVTLGK
EEEECCCHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCEEEEECC
KEQPNKEVQGNIEQSNSQKGNESEAEKSKEQDKETEQNNGTGKENTTEEPKEQDKGENSN
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
G
C
>Mature Secondary Structure
MDKLMENHWFLKGISLLLALMLFMSTTITEKNNTANISPFAGDTKETLTDCPIKVDYDTD
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEECCCCCCCHHHHHCCCEEEECCCC
KYIVTGIPSQVKVKLEGSKASVAAIKAKNKVEIPVDLRGYKKGTYEVPLKAVNLPSNVKA
CEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCEECCEEEECCCCCCEE
TVQPSKIKVAIYNKAKKYVSVDMKLSNEDRLQSGVSIDRAALKPKPDTVEVVGTEEEIDS
EECCCEEEEEEEECCCEEEEEEEEECCHHHHHCCCCCCHHHCCCCCCEEEEEECHHHHHH
IASAQAYVDVKDINKTVTKEAEVMIYDKNGKRLYLKTSPSKVSVTVPVVAQTGENSSEKT
HHHHHEEEEHHHCCHHHCCCEEEEEEECCCCEEEEEECCCEEEEEEEEEEECCCCCCCCE
VPLNYIKKGNVPEGLAVTNISLQPSEVTISGPKDVLDNIKTIEGVEVDLSKITESTTFDA
EEHEEEECCCCCCCEEEEEEEECCCEEEECCCHHHHHCHHHCCCCEEEHHHHCCCCCCCE
SVLLPKGVTSAKPNQVKVSVHVHAQKEQTKHKTVDGIPIQKNGLANDMTAQIIFPQSGKI
EEEECCCCCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEE
SVDISGEASIVEKITAAQITAVINLQGLSSGTHDVSIQVSGPSNVSINAKQKSAKVTLGK
EEEECCCHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCEEEEECC
KEQPNKEVQGNIEQSNSQKGNESEAEKSKEQDKETEQNNGTGKENTTEEPKEQDKGENSN
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]