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The map label for this gene is ycaD [C]

Identifier: 152969486

GI number: 152969486

Start: 1044410

End: 1045558

Strand: Direct

Name: ycaD [C]

Synonym: KPN_00929

Alternate gene names: 152969486

Gene position: 1044410-1045558 (Clockwise)

Preceding gene: 152969485

Following gene: 152969491

Centisome position: 19.65

GC content: 60.05

Gene sequence:

>1149_bases
ATGACCATCTACACCCGGCCAGTGCAAATGCTGCTCTGTGGCCTGCTTTTATTGACCCTGGCAATAGCGGTGCTGAATAC
GCTCGTCCCGCTCTGGCTCGCCCATGAAAACATGCCAACCTGGCAGGTCGGCATGGTGGGGTCATCCTATTTTACCGGCA
ACCTGGCCGGTACGTTGCTGGCCGGCTGGGTGATCAAGCGCCTGGGGTTTAACCGTAGCTATTATCTCGCATCGTTAATT
TTCGCCGTCGGCTGCGTAGGGCTGGGGATCACCGTTGGCTTCTGGACATGGCTGAGCTGGCGTTTTATCGCCGGCGTAGG
TTGCGCGATGATCTGGGTGGTGGTGGAAAGCGCGCTGGTTTGCAGCGGCACTTCCCGCAGTCGCGGTCGTCTGCTGGCGG
CGTACATGATGGTCTATTACGTCGGTACCGTACTGGGCCAGCTGATGGTCAGTAAATTACCCACCGATTTAATGAGCGTC
CTGCCGTGGGTGACCGGCCTGGCGCTGGCGGCGATCCTGCCGTTGCTGTTTACCCGCATTATGGGGCAGGCAGAAGAACC
GCATGAAACGGTACGTATCTGGCCGATGCTGAAGCTGCGCCAGGCGCGCCACGGGGTCAATGGCTGTATTATTTCGGGGA
TTGTCCTCGGCTCGCTGTATGGCCTGATGCCGCTGTGGCTGAACCATCAGGGCGTCAGCGACTCCGGCATCGGCTTCTGG
ATGGCGGTGATGGTGAGTGCGGGGATCCTTGGCCAGTGGCCGGTAGGGCGCCTGGCAGACCGCTACGGTCGCCTGCTGGT
GCTGCGGGTACAGGTCTTTGTGGTCATTCTGGGATGTCTGGCGATGCTTAGTCAGGCGGCAATGGCCCCGGCGCTGTTTG
TGCTTGGGGCATCTGGTTTCACGCTGTATCCGGTGGCGATGGCCTGGGCCTGTGAAAAAGTGGAGCACCATCAGCTGGTG
GCGATGAATCAGGCGCTGCTGATGAGCTATACCATCGGCAGCCTGCTGGGCCCGACCCTGACGGCGATGCTGATGCAGAA
CTTCTCAGACAACCTGCTGTTTATCATGATCGCCAGCGTGTCGTTTATCTATCTGCTGACCCTGCTGCGCAAAGCCGGGC
ATCATCCGACGCCGGTGGCGCACGCCTGA

Upstream 100 bases:

>100_bases
CCGACAAAACCGCGTCACGCCTGATTTCAGGTGGATTGACAATGTTTTTAGCAGTGGCATGATGCGCTCGCGATCTGAAC
ATTCCTCACGGTTTTTACCC

Downstream 100 bases:

>100_bases
CCCTGCAACGCGCAGCGCATGCTGCGCGTCATCTGCTGCAATCGCATAGGCTTACTGCCGCAGAGAGGACAAGTCGTTTT
TCATGAGAATGAAACGGCGG

Product: putative MFS family transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTIYTRPVQMLLCGLLLLTLAIAVLNTLVPLWLAHENMPTWQVGMVGSSYFTGNLAGTLLAGWVIKRLGFNRSYYLASLI
FAVGCVGLGITVGFWTWLSWRFIAGVGCAMIWVVVESALVCSGTSRSRGRLLAAYMMVYYVGTVLGQLMVSKLPTDLMSV
LPWVTGLALAAILPLLFTRIMGQAEEPHETVRIWPMLKLRQARHGVNGCIISGIVLGSLYGLMPLWLNHQGVSDSGIGFW
MAVMVSAGILGQWPVGRLADRYGRLLVLRVQVFVVILGCLAMLSQAAMAPALFVLGASGFTLYPVAMAWACEKVEHHQLV
AMNQALLMSYTIGSLLGPTLTAMLMQNFSDNLLFIMIASVSFIYLLTLLRKAGHHPTPVAHA

Sequences:

>Translated_382_residues
MTIYTRPVQMLLCGLLLLTLAIAVLNTLVPLWLAHENMPTWQVGMVGSSYFTGNLAGTLLAGWVIKRLGFNRSYYLASLI
FAVGCVGLGITVGFWTWLSWRFIAGVGCAMIWVVVESALVCSGTSRSRGRLLAAYMMVYYVGTVLGQLMVSKLPTDLMSV
LPWVTGLALAAILPLLFTRIMGQAEEPHETVRIWPMLKLRQARHGVNGCIISGIVLGSLYGLMPLWLNHQGVSDSGIGFW
MAVMVSAGILGQWPVGRLADRYGRLLVLRVQVFVVILGCLAMLSQAAMAPALFVLGASGFTLYPVAMAWACEKVEHHQLV
AMNQALLMSYTIGSLLGPTLTAMLMQNFSDNLLFIMIASVSFIYLLTLLRKAGHHPTPVAHA
>Mature_381_residues
TIYTRPVQMLLCGLLLLTLAIAVLNTLVPLWLAHENMPTWQVGMVGSSYFTGNLAGTLLAGWVIKRLGFNRSYYLASLIF
AVGCVGLGITVGFWTWLSWRFIAGVGCAMIWVVVESALVCSGTSRSRGRLLAAYMMVYYVGTVLGQLMVSKLPTDLMSVL
PWVTGLALAAILPLLFTRIMGQAEEPHETVRIWPMLKLRQARHGVNGCIISGIVLGSLYGLMPLWLNHQGVSDSGIGFWM
AVMVSAGILGQWPVGRLADRYGRLLVLRVQVFVVILGCLAMLSQAAMAPALFVLGASGFTLYPVAMAWACEKVEHHQLVA
MNQALLMSYTIGSLLGPTLTAMLMQNFSDNLLFIMIASVSFIYLLTLLRKAGHHPTPVAHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. YcaD (TC 2.A.1.26) family [H]

Homologues:

Organism=Escherichia coli, GI1787126, Length=381, Percent_Identity=82.4146981627297, Blast_Score=624, Evalue=1e-180,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41634; Mature: 41503

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50850 MFS ; PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYTRPVQMLLCGLLLLTLAIAVLNTLVPLWLAHENMPTWQVGMVGSSYFTGNLAGTLL
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCHHHHHHH
AGWVIKRLGFNRSYYLASLIFAVGCVGLGITVGFWTWLSWRFIAGVGCAMIWVVVESALV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSGTSRSRGRLLAAYMMVYYVGTVLGQLMVSKLPTDLMSVLPWVTGLALAAILPLLFTRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MGQAEEPHETVRIWPMLKLRQARHGVNGCIISGIVLGSLYGLMPLWLNHQGVSDSGIGFW
HCCCCCCHHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
MAVMVSAGILGQWPVGRLADRYGRLLVLRVQVFVVILGCLAMLSQAAMAPALFVLGASGF
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TLYPVAMAWACEKVEHHQLVAMNQALLMSYTIGSLLGPTLTAMLMQNFSDNLLFIMIASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SFIYLLTLLRKAGHHPTPVAHA
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TIYTRPVQMLLCGLLLLTLAIAVLNTLVPLWLAHENMPTWQVGMVGSSYFTGNLAGTLL
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCHHHHHHH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HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA