| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is dinG [H]
Identifier: 152969388
GI number: 152969388
Start: 926151
End: 928307
Strand: Direct
Name: dinG [H]
Synonym: KPN_00831
Alternate gene names: 152969388
Gene position: 926151-928307 (Clockwise)
Preceding gene: 152969387
Following gene: 152969389
Centisome position: 17.42
GC content: 59.94
Gene sequence:
>2157_bases ATGGCTTTGACCGCTGCGCTGAAAGCGCAAATCGCCGCCTGGTATAAGGCGCTTCAGGAACAGATCCCGGACTTTATTCC GCGTCCCCCGCAGCGGCAGATGATCGCCGATGTGGCGAAAACCCTCGCCGGGGAAGAGGGCAGGCATCTGGCTATCGAAG CGCCGACCGGCGTCGGCAAAACGCTGTCATATCTGATCCCGGGCATCGCCATCGCCCGCGAGGAACAAAAAACGCTGGTG GTCAGCACCGCCAACGTCGCCCTGCAGGATCAAATCTACAGTAAGGACCTGCCGCTGCTGCGTAAAATCATTCCCGACCT GCGCTTTACCGCCGCCTTCGGTCGTGGGCGCTACGTCTGTCCGCGCAACCTGACGGCGCTGGCCAGCACCGAGCCGTCGC AGCAGGATCTGCTGGCCTTTCTCGATGACGATCTCACCCCGAATAATCAGGCGGAGCAGAAGCTGTGCGCGACCCTGAAG CAGGATCTCGACAGCTACCGCTGGGACGGCCTGCGCGACCATACCGACAAAGCCATCGACGATGGGCTATGGAGCCGGCT GAGCACCGATAAGGCCAGCTGCCTGAACCGCAACTGCCACTACTATCGCGAGTGCCCGTTCTTTGTGGCGCGGCGGGAAA TTCAGGAGGCGGAAGTGGTGGTGGCCAACCATGCGCTGGTGATGGCGGCGATGGAGAGCGAAGCGGTGCTGCCGGAGCCG AAAAACCTGCTGCTGGTCCTCGATGAAGGCCATCATCTGCCGGACGTCGCCCGCGACGCGCTGGAGATGAGCGCCGAGAT CACCGCCCCCTGGTTTCGCCTGCAGCTGGATCTATTCTGCAAGCTGGTGGCTACCTGCATGGAGCAGTTTCGTCCGAAAA CCACGCCGCCGCTGGCCAATCCGGAGCGGCTCACCGCTCATTGCGAAGAGCTTTTCGAGCTGATTGCTTCGTTGAATAAT ATTCTCAATCTCTATATGCCCGCCGGTCAGGAAGCGGAGCATCGCTTCCCGATGGGCGAACTGCCGCAGGAGGTGATGGA GATCTGCCAGCGGCTGGCGAAGCTCACCGAGTTGCTGCGCGGCCTGGCGGAGCTGTTCCTGAACGATCTCAGCGAAAAGA CCGGCAGCCATGACGTGGTGCGCCTGCATCGGGTGCTGCTGCAGATGAACCGCGCCCTTGGCATGTTTGAAAGCCAAAGC AAGCTGTGGCGCCTGGCGTCGCTGGCGCAGTCCTCAGGCGCGCCGGTAACCAAATGGGCGACGCGGGTGGTGCGCGATGG CCAGATCCACGTCTGGTTCCACTGCGTCGGGATCCGCGTCAGCGATCAGCTTGAACGGCTGCTGTGGCGCAGCGTGCCGC ATATCGTGGTGACGTCAGCGACGCTGCGCTCGCTAAACAGCTTCTCGCGCCTGCAGGAGATGAGCGGTCTGAAGGAGAAA GCGGGGGACCGCTTCGTGGCGCTGGATTCGCCGTTCAACCACGTGGAGCAGGGGAAAATTATTATTCCTCAAATGCGTTA TGAACCGCTGATGGATAACGAAGAGCAGCACATTGCCGAGATGGCGGCCTATTTTCGCCAGCAGGTGGAGAGCAAAAAAC ATCTCGGGATGCTGGTGCTGTTTGCCAGCGGGCGGGCGATGAACCGCTTCCTCGAGCATGTGACCGATCTGCGCCTGATG CTGTTGGTGCAGGGCGACCAGCCGCGCTACCGGCTGGTGGAGCTGCATCGCAAACGGGTGGAAAGCGGCGAGCGCAGCGT GCTGGTGGGTCTGCAGTCCTTTGCCGAAGGTCTCGATTTAAAAGGCGATCTGCTGAGCCAGGTGCATATCCATAAAATCG CTTTTCCGCCCATCGACAGCCCGGTAGTGATCACCGAAGGCGAATGGCTGAAAAGCCTCAATCGTTATCCCTTCGAGGTA CAGAGTTTGCCCAGCGCCTCCTTTAATCTTATTCAGCAGGTGGGGCGTTTGATCCGTAGCCATAACTGCTGGGGAGAGGT GGTGATTTACGATAAGCGTCTGTTGACCAAAAACTACGGCGCGCGTCTACTGAACGCGTTACCTGTTTTTCCCATAGAGC AGCCGGGCGTTCCGGAGGTTATAGTAAAACGGAAAGCAAAACAGACAGCAAAACAGACGGGCCGCAAACGTCGCTGA
Upstream 100 bases:
>100_bases CTATTTGTCGAGCAGGCTTCCACACTCCGCAGAAAGCAATACCTCCGGGCGGGCAAAAATGGCACAATAGTGGCTGTTTA TACAGTATTCAGGTTTTCTC
Downstream 100 bases:
>100_bases CGCCGGCGCGTGATGCACCAGGGGGAGCCATGGAGTACAGCAAAATTATAAAAGAGGTGGGTCGCGGTAAGAATCATGCC CGCGATCTCGATGAAGAGAC
Product: ATP-dependent DNA helicase DinG
Products: NA
Alternate protein names: DNA-damage-inducible protein G [H]
Number of amino acids: Translated: 718; Mature: 717
Protein sequence:
>718_residues MALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLV VSTANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVCPRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLK QDLDSYRWDGLRDHTDKAIDDGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLANPERLTAHCEELFELIASLNN ILNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLRGLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQS KLWRLASLAQSSGAPVTKWATRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVLFASGRAMNRFLEHVTDLRLM LLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEV QSLPSASFNLIQQVGRLIRSHNCWGEVVIYDKRLLTKNYGARLLNALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR
Sequences:
>Translated_718_residues MALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLV VSTANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVCPRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLK QDLDSYRWDGLRDHTDKAIDDGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLANPERLTAHCEELFELIASLNN ILNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLRGLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQS KLWRLASLAQSSGAPVTKWATRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVLFASGRAMNRFLEHVTDLRLM LLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEV QSLPSASFNLIQQVGRLIRSHNCWGEVVIYDKRLLTKNYGARLLNALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR >Mature_717_residues ALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVV STANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVCPRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLKQ DLDSYRWDGLRDHTDKAIDDGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEPK NLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLANPERLTAHCEELFELIASLNNI LNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLRGLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQSK LWRLASLAQSSGAPVTKWATRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEKA GDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVLFASGRAMNRFLEHVTDLRLML LVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQ SLPSASFNLIQQVGRLIRSHNCWGEVVIYDKRLLTKNYGARLLNALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787018, Length=718, Percent_Identity=91.0863509749304, Blast_Score=1353, Evalue=0.0, Organism=Escherichia coli, GI1788110, Length=700, Percent_Identity=28.2857142857143, Blast_Score=189, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR010614 - InterPro: IPR011545 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 [H]
Pfam domain/function: PF00270 DEAD; PF06733 DEAD_2 [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 81352; Mature: 81221
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHH TLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVC HHHHHHCCHHEECCCCCEEEEEECCHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCEEC PRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLKQDLDSYRWDGLRDHTDKAID CCCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP HHHHHHHCCCHHHHHCCCCCHHHCCHHHHHHHHHHHHHEEHCCCCEEEEECCCCCCCCCC KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLAN CCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PERLTAHCEELFELIASLNNILNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQSKLWRLASLAQSSGAPVTKWA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH TRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEK HHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCHHHH AGDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVL CCCEEEEECCCCCHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE FASGRAMNRFLEHVTDLRLMLLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDL EECCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC KGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS CHHHHHHHHHHHEECCCCCCCEEEECCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHC HNCWGEVVIYDKRLLTKNYGARLLNALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR CCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHH TLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVC HHHHHHCCHHEECCCCCEEEEEECCHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCEEC PRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLKQDLDSYRWDGLRDHTDKAID CCCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP HHHHHHHCCCHHHHHCCCCCHHHCCHHHHHHHHHHHHHEEHCCCCEEEEECCCCCCCCCC KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLAN CCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PERLTAHCEELFELIASLNNILNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQSKLWRLASLAQSSGAPVTKWA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH TRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEK HHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCHHHH AGDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVL CCCEEEEECCCCCHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE FASGRAMNRFLEHVTDLRLMLLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDL EECCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC KGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS CHHHHHHHHHHHEECCCCCCCEEEECCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHC HNCWGEVVIYDKRLLTKNYGARLLNALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR CCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]