Click here to switch to the map view.

The map label for this gene is csoR [H]

Identifier: 151222203

GI number: 151222203

Start: 2212576

End: 2212914

Strand: Reverse

Name: csoR [H]

Synonym: NWMN_1991

Alternate gene names: 151222203

Gene position: 2212914-2212576 (Counterclockwise)

Preceding gene: 151222206

Following gene: 151222202

Centisome position: 76.87

GC content: 33.33

Gene sequence:

>339_bases
ATGGGATATAGTATAGTAAGGAATGTAAATGAAGGAGTGAATGCTATGACTGAACAAGATAATGCACATCATTCTGAACA
AATAAAAACGAATCTTAAATCACGTTTAAATCGAATTGAAGGACAAGTGAGAGCGATTAATCGCATGATTGAAGAAGATG
TCTATTGTGATGATGTCCTTACGCAAATAAGAGCGACACGTTCGGCGTTAAACAGTGTTGCGATAAAGTTATTAGAACAA
CATATGAAAAGTTGTATTATGAATAAAGTTAATCAAGGTGCTCAGGAAGAGGCAATGGAAGAGTTATTAGTGACTTTTCA
AAAATTGATTAAAGACTAA

Upstream 100 bases:

>100_bases
TCTTAAACGAGTAGTATATCTTATTAATTGTATCATGAAGCAATTTAAATATCATGACAATTTAGTTTGAAAAACACACT
TTGTGTTGACGTTGTGTTTT

Downstream 100 bases:

>100_bases
AGGAGTTTAAGATGATACATCAAAATACGATTTACACAGCGGGAATTGAAACAGAAGAACAAGTAAGTCAATTGACAGAA
CGCATTTCAAATATGATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MGYSIVRNVNEGVNAMTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVAIKLLEQ
HMKSCIMNKVNQGAQEEAMEELLVTFQKLIKD

Sequences:

>Translated_112_residues
MGYSIVRNVNEGVNAMTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVAIKLLEQ
HMKSCIMNKVNQGAQEEAMEELLVTFQKLIKD
>Mature_111_residues
GYSIVRNVNEGVNAMTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVAIKLLEQH
MKSCIMNKVNQGAQEEAMEELLVTFQKLIKD

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 12803; Mature: 12672

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYSIVRNVNEGVNAMTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVL
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQIRATRSALNSVAIKLLEQHMKSCIMNKVNQGAQEEAMEELLVTFQKLIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GYSIVRNVNEGVNAMTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVL
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQIRATRSALNSVAIKLLEQHMKSCIMNKVNQGAQEEAMEELLVTFQKLIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]