Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
---|---|
Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is hxuA [H]
Identifier: 150398708
GI number: 150398708
Start: 3727030
End: 3728475
Strand: Direct
Name: hxuA [H]
Synonym: Smed_3524
Alternate gene names: 150398708
Gene position: 3727030-3728475 (Clockwise)
Preceding gene: 150398707
Following gene: 150398709
Centisome position: 98.55
GC content: 67.22
Gene sequence:
>1446_bases ATGAAGGATCGTCTTTCGGAACGTGATGACAGGCCGGGCTTTTGCATTTCCGGCGCGGGCGGCTTGCCTGGAGCAGGCGG CCTTTTCGGAGCGGGCAGATTGTGCGGCGGCTTGAGCGCACTCGTTCTCGGAACTGTCTTGTCTGGCGGTTTTGTCGAGT CCGTATCGGGCAATCCGCTCGATGGACACGTCGTTTCGGGTTCGGCTTCGATCGGGTCGGACGGTACTGTCATGACTGTG ACGCAGGGAACGGACCGTGCGGTGATTGACTGGCGGAGCTTTTCGATCGGGGCGGGAGAGACCACCCGCTTCGTGCAGCC GTCGGCGTCGTCCGTGACGGCCAACCGGGTGACGGGCGGGGACCCGTCCTCGGTTCTCGGGTCTTTGAAGGCCAATGGCA CGGTTGTTCTCGTGAACCGGAACGGGATCGTGTTCGGGACGGATGCCCGCGTCGACGCGGGCGGGCTTGTCGCGACGGTC CATGATCTGGATACGGCGGGGTTCATGTCGGGTTCGGACGTTCTGCGCTTCGAGGGGGGTGCTCGGCCCGGCGCCTCGGT CGTCAACCACGGGACGATCAGCGTCAGGGATGCGGGACTTGCGGCCTTCGTTGCTCCGCATGTGCGCAATGAGGGGGTGA TCACGGCCGATTTTGGGCGGGTTGCGTTGGCTTCGGCGAAGGGATTTTCGGTCGATCTTTACGGCGACGGTCTGCTGTCT TTCGCGCCCGGCGATGGGCTCGAGGAGACGATTGGCGACGGCGCGGAAGCGCTGGTGCAGAACGGCGGCACGCTTGCTGG GTCCCGGGTACTTCTGACGGCGCATGCGGCGCGGGAAGTGGTGAACGCGTCGGTGAATGTGTCCGGTCTCGTGCGTGCGA CGTCGGTGTCGTCACGTGGAGGCGTGATCACGCTTGGGGGATCGGGATCTGTGCGCGTCTCCGGGCGCGGGCGGCTTGAT GCGTCCGGCTCGGGGGGCGGCGGCCGTGTGACGATCAAGGCGGGGCCGTTCTCGACGGACGGGACGATCGATGTGCGCGG TGTGGATGCGAGTGGAGCTGCGGTTGCGCGGGGCGGCATAGTGGAGATCACGGCGGACGGCGTGATGCTTGGCGGCGAGA TCACTGCGTCCGGCGCGTCCGGCGGCGGCGTGGATGTCGCGTCGCGGGGCGTGCTGTCTCTTGCGGGGCGCGTCGAGGCT CAGGGGCTCCTGGGTTCGGGGGGCAGCATCCGCTATCGCGGGCGGCGGGTCGTGGAGACGGGGACGGGGTCGACGAGCGT ATCGGGTCTGACCCATGGGGGGACGATCAGCGTTATGGCGGACCAGTCGATCGCCACGTCGGGTTCCTATGCGGCGGGAG GCGTTTACGGCAAGGGGGGACGCATCGACATGAGCGCGCCGGACGTGCGCCTTCTGTCCGCGGGTCTTGAGGCGCGGGGA CGCTAG
Upstream 100 bases:
>100_bases CGGGCAGGTTTTGACCATGAAATGCAGGGCCCGGCCAGTCGGGTGATCAAGCAGATCGTGCGCGGCAATGAAGCGTGCCG GACGGAGACAGGAGGCGGCG
Downstream 100 bases:
>100_bases CAGGGCGGTCTTGTTCGTGTTGGCGGCGGTTTTCAGGGGGGCAAGACAGCTGATACGAAGACGGTTTATTATGACAGCTT CGTCGGGCGGTGGGGCGCTC
Product: filamentous hemagglutinin outer membrane protein
Products: NA
Alternate protein names: Heme:hemopexin utilization protein A [H]
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MKDRLSERDDRPGFCISGAGGLPGAGGLFGAGRLCGGLSALVLGTVLSGGFVESVSGNPLDGHVVSGSASIGSDGTVMTV TQGTDRAVIDWRSFSIGAGETTRFVQPSASSVTANRVTGGDPSSVLGSLKANGTVVLVNRNGIVFGTDARVDAGGLVATV HDLDTAGFMSGSDVLRFEGGARPGASVVNHGTISVRDAGLAAFVAPHVRNEGVITADFGRVALASAKGFSVDLYGDGLLS FAPGDGLEETIGDGAEALVQNGGTLAGSRVLLTAHAAREVVNASVNVSGLVRATSVSSRGGVITLGGSGSVRVSGRGRLD ASGSGGGGRVTIKAGPFSTDGTIDVRGVDASGAAVARGGIVEITADGVMLGGEITASGASGGGVDVASRGVLSLAGRVEA QGLLGSGGSIRYRGRRVVETGTGSTSVSGLTHGGTISVMADQSIATSGSYAAGGVYGKGGRIDMSAPDVRLLSAGLEARG R
Sequences:
>Translated_481_residues MKDRLSERDDRPGFCISGAGGLPGAGGLFGAGRLCGGLSALVLGTVLSGGFVESVSGNPLDGHVVSGSASIGSDGTVMTV TQGTDRAVIDWRSFSIGAGETTRFVQPSASSVTANRVTGGDPSSVLGSLKANGTVVLVNRNGIVFGTDARVDAGGLVATV HDLDTAGFMSGSDVLRFEGGARPGASVVNHGTISVRDAGLAAFVAPHVRNEGVITADFGRVALASAKGFSVDLYGDGLLS FAPGDGLEETIGDGAEALVQNGGTLAGSRVLLTAHAAREVVNASVNVSGLVRATSVSSRGGVITLGGSGSVRVSGRGRLD ASGSGGGGRVTIKAGPFSTDGTIDVRGVDASGAAVARGGIVEITADGVMLGGEITASGASGGGVDVASRGVLSLAGRVEA QGLLGSGGSIRYRGRRVVETGTGSTSVSGLTHGGTISVMADQSIATSGSYAAGGVYGKGGRIDMSAPDVRLLSAGLEARG R >Mature_481_residues MKDRLSERDDRPGFCISGAGGLPGAGGLFGAGRLCGGLSALVLGTVLSGGFVESVSGNPLDGHVVSGSASIGSDGTVMTV TQGTDRAVIDWRSFSIGAGETTRFVQPSASSVTANRVTGGDPSSVLGSLKANGTVVLVNRNGIVFGTDARVDAGGLVATV HDLDTAGFMSGSDVLRFEGGARPGASVVNHGTISVRDAGLAAFVAPHVRNEGVITADFGRVALASAKGFSVDLYGDGLLS FAPGDGLEETIGDGAEALVQNGGTLAGSRVLLTAHAAREVVNASVNVSGLVRATSVSSRGGVITLGGSGSVRVSGRGRLD ASGSGGGGRVTIKAGPFSTDGTIDVRGVDASGAAVARGGIVEITADGVMLGGEITASGASGGGVDVASRGVLSLAGRVEA QGLLGSGGSIRYRGRRVVETGTGSTSVSGLTHGGTISVMADQSIATSGSYAAGGVYGKGGRIDMSAPDVRLLSAGLEARG R
Specific function: Binds heme/hemopexin complexes [H]
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008638 - InterPro: IPR012334 - InterPro: IPR011050 - InterPro: IPR011102 [H]
Pfam domain/function: PF05860 Haemagg_act [H]
EC number: NA
Molecular weight: Translated: 47118; Mature: 47118
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDRLSERDDRPGFCISGAGGLPGAGGLFGAGRLCGGLSALVLGTVLSGGFVESVSGNPL CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCC DGHVVSGSASIGSDGTVMTVTQGTDRAVIDWRSFSIGAGETTRFVQPSASSVTANRVTGG CCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCEEEECCCCCCEEECCCCCC DPSSVLGSLKANGTVVLVNRNGIVFGTDARVDAGGLVATVHDLDTAGFMSGSDVLRFEGG CHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCC ARPGASVVNHGTISVRDAGLAAFVAPHVRNEGVITADFGRVALASAKGFSVDLYGDGLLS CCCCCHHEECCEEEEECCCEEEEEECCCCCCCEEEECCCCEEEEECCCCEEEEECCCEEE FAPGDGLEETIGDGAEALVQNGGTLAGSRVLLTAHAAREVVNASVNVSGLVRATSVSSRG ECCCCCHHHHHCCCHHHHHHCCCEEECCEEEEEEHHHHHHHHCCCCEEEEEEEEEECCCC GVITLGGSGSVRVSGRGRLDASGSGGGGRVTIKAGPFSTDGTIDVRGVDASGAAVARGGI CEEEECCCCEEEECCCCEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEECCCE VEITADGVMLGGEITASGASGGGVDVASRGVLSLAGRVEAQGLLGSGGSIRYRGRRVVET EEEEECCEEECCEEEECCCCCCCCCHHCCCHHHHCCCEEECEEECCCCEEEECCEEEEEE GTGSTSVSGLTHGGTISVMADQSIATSGSYAAGGVYGKGGRIDMSAPDVRLLSAGLEARG CCCCCEECCEECCCEEEEEECCCCCCCCCCCCCCEECCCCEEECCCCCCEEEECCHHHCC R C >Mature Secondary Structure MKDRLSERDDRPGFCISGAGGLPGAGGLFGAGRLCGGLSALVLGTVLSGGFVESVSGNPL CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCC DGHVVSGSASIGSDGTVMTVTQGTDRAVIDWRSFSIGAGETTRFVQPSASSVTANRVTGG CCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCEEEECCCCCCEEECCCCCC DPSSVLGSLKANGTVVLVNRNGIVFGTDARVDAGGLVATVHDLDTAGFMSGSDVLRFEGG CHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCC ARPGASVVNHGTISVRDAGLAAFVAPHVRNEGVITADFGRVALASAKGFSVDLYGDGLLS CCCCCHHEECCEEEEECCCEEEEEECCCCCCCEEEECCCCEEEEECCCCEEEEECCCEEE FAPGDGLEETIGDGAEALVQNGGTLAGSRVLLTAHAAREVVNASVNVSGLVRATSVSSRG ECCCCCHHHHHCCCHHHHHHCCCEEECCEEEEEEHHHHHHHHCCCCEEEEEEEEEECCCC GVITLGGSGSVRVSGRGRLDASGSGGGGRVTIKAGPFSTDGTIDVRGVDASGAAVARGGI CEEEECCCCEEEECCCCEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEECCCE VEITADGVMLGGEITASGASGGGVDVASRGVLSLAGRVEAQGLLGSGGSIRYRGRRVVET EEEEECCEEECCEEEECCCCCCCCCHHCCCHHHHCCCEEECEEECCCCEEEECCEEEEEE GTGSTSVSGLTHGGTISVMADQSIATSGSYAAGGVYGKGGRIDMSAPDVRLLSAGLEARG CCCCCEECCEECCCEEEEEECCCCCCCCCCCCCCEECCCCEEECCCCCCEEEECCHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]