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The map label for this gene is 150398707

Identifier: 150398707

GI number: 150398707

Start: 3725274

End: 3726920

Strand: Direct

Name: 150398707

Synonym: Smed_3523

Alternate gene names: NA

Gene position: 3725274-3726920 (Clockwise)

Preceding gene: 150398705

Following gene: 150398708

Centisome position: 98.5

GC content: 63.87

Gene sequence:

>1647_bases
ATGTCTTCGACCTATGCTTTGGCACAGGTCCCTTCGACCCTCGATCCGGCGCGCATCGGGGGCAATCTGGAGACGCAGCC
GCTGCAGCGCAGGACCCAGTACTCCATCAGTCTCCCCCGCGTTGAGGATGGGGTCGTGCCGGAGGGTGCTTCGGGGGTCA
CATTCGTCTTTGGCGGCGTGAGGATCGAGGGGGCTGCCGTCCTGCCCGAGGCCAAGCTCCTGGCCGACTGGCCCCACAAG
GCCGGCGACACGGTTCGGGTAGATGAGATTTTCGCGCTGGCCGAGTCGATCAGTCAGGCCTATCGCGAGGCTGGCTATGC
GCTCTCCTTTGCCATGGTGCCCCAGCAGCAGATCGATGGCGGTGTGTTCCGCATCCAGGTCGTCGAGGGTTTTGTCGAGC
GGGTCGTGATAAAGGGCGATCTGTCCGAGGCGGTTCGGGCCGACATGCAGGCTTTTGCCGATCGCATCCTCGCCTCGCGA
CCGCTGCGCACGGCAGATCTCGAGCGCTACCTGCTGCTGATCAACGATATGCCGGGGGTCACGGCCTCCGGCGTCCTCTC
CCCGGCTGCGGTCGAGGCGGGCGCGGTGCTGACGCTGGAGGCGGCGCACGAGCCGGTCGCCGGTTCGGTCGGCTACAATA
GTTTCATGCCAGATACTCTCGGCACGCATGTCCTTGAGGCCAGTGGCGGGATGCAGGGCGTTCTTACCGGATCCGGGTCG
GTCAGCCTAACGGTCAGGCGGTCATTGATGCCGGATGCCTATCTGGGCGTATCGGGGGACGCCTCGGTCGGGATCGGGAC
GGAGGGCTTGCGCGTGGGCGTTTCCGGGCTGTGGTCCCGGATCGATCCGCGCGATATTCTGCTCGACGTCATCGATTATA
AAGGTTCGCTGGTTAGCGCACAGCTCTACGGGTTCTACCCGATCATCCGTAGCCGTGAAGAGAATCTGTCCATAGGAGCC
TCCTTTTCGCTGGACAACGACAATTCGACGATCCTCACCACGGATTTCGTCGACGACCGGCTCCGTTCGGTTTCGGTCTG
GGGTAGGTATGACTTCGTGGATCAGACTCGCGCGGTAACCTCGCTGAGGGGCGCGTTGACGCATGGCGTCGATCTTTTCG
GGGCGACCGGCAACAGCCGCGCCAACGGGGTTGTGAAATATACGAAGGTCGAACTGGACGCGCAGCGCAATCAGCCTCTG
GCCGACGTCCTGGGCGGTGCGCTGTCCCTGCAGGCGACGGCGCACGCCCAGGCGGCTCTTGGCTCGGGCGCCCTGTTCAG
TGCGCCCGAGTGTTCCTTCGGCGGCCGCCGGTTCGGTCGGGGGTTCGATTCCGGTATTTTGACTGGCGATCATTGCGCGA
TGGGAAGCGTCGAGCTGCATTGGGTGCGTTCCGTCGATTTCCCTGATCTCGGCGCCCCGGTGTTCCTGGATTTCTATGCT
TTCGTCGATGGAGGCGTCGTCTGGCAGAAGGGCGAGGTGTTGTCCGGAGAACCGGGAAGAGGTCACGCAGCCTCGCTGGG
GCTTGGCCTGAGTGTCCAGTTTACGGCGGAGGCTTCGGGTCTACTTGAGGTCAGCCGGCCCGTGTCGCTGTCGGTCGGGA
CCCCTGATGAGACGCGGATCCTCGGGGCGCTGTCATTCAGGTTCTAG

Upstream 100 bases:

>100_bases
ATTCGATCCGCAGGAGAGGTGGGGTGTGCGCGTAACTGTCGTTAACGAACTATTTACAAACCGCAGGCGAATGAGGTGCA
GCCTGGCGTTGGTGGTTTTG

Downstream 100 bases:

>100_bases
TATGAAGTGCGGGCAGGTTTTGACCATGAAATGCAGGGCCCGGCCAGTCGGGTGATCAAGCAGATCGTGCGCGGCAATGA
AGCGTGCCGGACGGAGACAG

Product: polypeptide-transport-associated domain-containing protein

Products: NA

Alternate protein names: Hemolysin Activation/Secretion Protein; Polypeptide-Transport-Associated Domain Protein ShlB-Type; Outer Membrane Protein; Activation/Secretion Signal Peptide Protein; Hemolysin Activation/Secretion Protein-Like; Heme-Hemopexin Utilization Protein B; Hemolysin Activation/Secretion Protein-Like Protein; Hemolysin Activator-Like Protein With Signal Peptide; ShlB-Type Family Protein; Hemolysin Activation/Secretion Signal Peptide Protein; Secreted Protein Related Heme Utilisation; OMP85 Family Outer Membrane Protein; Exported Heme Utilisation Related Protein; Heme/Hemopexin Utilization Protein; HlyB Family Hemolysin Activator Protein

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MSSTYALAQVPSTLDPARIGGNLETQPLQRRTQYSISLPRVEDGVVPEGASGVTFVFGGVRIEGAAVLPEAKLLADWPHK
AGDTVRVDEIFALAESISQAYREAGYALSFAMVPQQQIDGGVFRIQVVEGFVERVVIKGDLSEAVRADMQAFADRILASR
PLRTADLERYLLLINDMPGVTASGVLSPAAVEAGAVLTLEAAHEPVAGSVGYNSFMPDTLGTHVLEASGGMQGVLTGSGS
VSLTVRRSLMPDAYLGVSGDASVGIGTEGLRVGVSGLWSRIDPRDILLDVIDYKGSLVSAQLYGFYPIIRSREENLSIGA
SFSLDNDNSTILTTDFVDDRLRSVSVWGRYDFVDQTRAVTSLRGALTHGVDLFGATGNSRANGVVKYTKVELDAQRNQPL
ADVLGGALSLQATAHAQAALGSGALFSAPECSFGGRRFGRGFDSGILTGDHCAMGSVELHWVRSVDFPDLGAPVFLDFYA
FVDGGVVWQKGEVLSGEPGRGHAASLGLGLSVQFTAEASGLLEVSRPVSLSVGTPDETRILGALSFRF

Sequences:

>Translated_548_residues
MSSTYALAQVPSTLDPARIGGNLETQPLQRRTQYSISLPRVEDGVVPEGASGVTFVFGGVRIEGAAVLPEAKLLADWPHK
AGDTVRVDEIFALAESISQAYREAGYALSFAMVPQQQIDGGVFRIQVVEGFVERVVIKGDLSEAVRADMQAFADRILASR
PLRTADLERYLLLINDMPGVTASGVLSPAAVEAGAVLTLEAAHEPVAGSVGYNSFMPDTLGTHVLEASGGMQGVLTGSGS
VSLTVRRSLMPDAYLGVSGDASVGIGTEGLRVGVSGLWSRIDPRDILLDVIDYKGSLVSAQLYGFYPIIRSREENLSIGA
SFSLDNDNSTILTTDFVDDRLRSVSVWGRYDFVDQTRAVTSLRGALTHGVDLFGATGNSRANGVVKYTKVELDAQRNQPL
ADVLGGALSLQATAHAQAALGSGALFSAPECSFGGRRFGRGFDSGILTGDHCAMGSVELHWVRSVDFPDLGAPVFLDFYA
FVDGGVVWQKGEVLSGEPGRGHAASLGLGLSVQFTAEASGLLEVSRPVSLSVGTPDETRILGALSFRF
>Mature_547_residues
SSTYALAQVPSTLDPARIGGNLETQPLQRRTQYSISLPRVEDGVVPEGASGVTFVFGGVRIEGAAVLPEAKLLADWPHKA
GDTVRVDEIFALAESISQAYREAGYALSFAMVPQQQIDGGVFRIQVVEGFVERVVIKGDLSEAVRADMQAFADRILASRP
LRTADLERYLLLINDMPGVTASGVLSPAAVEAGAVLTLEAAHEPVAGSVGYNSFMPDTLGTHVLEASGGMQGVLTGSGSV
SLTVRRSLMPDAYLGVSGDASVGIGTEGLRVGVSGLWSRIDPRDILLDVIDYKGSLVSAQLYGFYPIIRSREENLSIGAS
FSLDNDNSTILTTDFVDDRLRSVSVWGRYDFVDQTRAVTSLRGALTHGVDLFGATGNSRANGVVKYTKVELDAQRNQPLA
DVLGGALSLQATAHAQAALGSGALFSAPECSFGGRRFGRGFDSGILTGDHCAMGSVELHWVRSVDFPDLGAPVFLDFYAF
VDGGVVWQKGEVLSGEPGRGHAASLGLGLSVQFTAEASGLLEVSRPVSLSVGTPDETRILGALSFRF

Specific function: Unknown

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57892; Mature: 57761

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTYALAQVPSTLDPARIGGNLETQPLQRRTQYSISLPRVEDGVVPEGASGVTFVFGGV
CCCCEEHEECCCCCCHHHCCCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCCEEEEEECE
RIEGAAVLPEAKLLADWPHKAGDTVRVDEIFALAESISQAYREAGYALSFAMVPQQQIDG
EEECEEECCCCHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCC
GVFRIQVVEGFVERVVIKGDLSEAVRADMQAFADRILASRPLRTADLERYLLLINDMPGV
CEEEEEEHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEECCCCC
TASGVLSPAAVEAGAVLTLEAAHEPVAGSVGYNSFMPDTLGTHVLEASGGMQGVLTGSGS
CCCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHEEECCCCEEEEEECCCC
VSLTVRRSLMPDAYLGVSGDASVGIGTEGLRVGVSGLWSRIDPRDILLDVIDYKGSLVSA
EEEEEECCCCCCCEECCCCCCCCCCCCCCCEECHHHHHHCCCHHHHHHHHHHCCCCEEEE
QLYGFYPIIRSREENLSIGASFSLDNDNSTILTTDFVDDRLRSVSVWGRYDFVDQTRAVT
EEHEEEHHHCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHEEEECCCCCHHHHHHHHH
SLRGALTHGVDLFGATGNSRANGVVKYTKVELDAQRNQPLADVLGGALSLQATAHAQAAL
HHHHHHHCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHCCCEEEEEHHHHHHHC
GSGALFSAPECSFGGRRFGRGFDSGILTGDHCAMGSVELHWVRSVDFPDLGAPVFLDFYA
CCCCEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
FVDGGVVWQKGEVLSGEPGRGHAASLGLGLSVQFTAEASGLLEVSRPVSLSVGTPDETRI
HHCCCEEEECCCEECCCCCCCCEEEEECCEEEEEECCCCCEEEECCCEEEEECCCCCCEE
LGALSFRF
EEEEECCC
>Mature Secondary Structure 
SSTYALAQVPSTLDPARIGGNLETQPLQRRTQYSISLPRVEDGVVPEGASGVTFVFGGV
CCCEEHEECCCCCCHHHCCCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCCEEEEEECE
RIEGAAVLPEAKLLADWPHKAGDTVRVDEIFALAESISQAYREAGYALSFAMVPQQQIDG
EEECEEECCCCHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCC
GVFRIQVVEGFVERVVIKGDLSEAVRADMQAFADRILASRPLRTADLERYLLLINDMPGV
CEEEEEEHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEECCCCC
TASGVLSPAAVEAGAVLTLEAAHEPVAGSVGYNSFMPDTLGTHVLEASGGMQGVLTGSGS
CCCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHEEECCCCEEEEEECCCC
VSLTVRRSLMPDAYLGVSGDASVGIGTEGLRVGVSGLWSRIDPRDILLDVIDYKGSLVSA
EEEEEECCCCCCCEECCCCCCCCCCCCCCCEECHHHHHHCCCHHHHHHHHHHCCCCEEEE
QLYGFYPIIRSREENLSIGASFSLDNDNSTILTTDFVDDRLRSVSVWGRYDFVDQTRAVT
EEHEEEHHHCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHEEEECCCCCHHHHHHHHH
SLRGALTHGVDLFGATGNSRANGVVKYTKVELDAQRNQPLADVLGGALSLQATAHAQAAL
HHHHHHHCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHCCCEEEEEHHHHHHHC
GSGALFSAPECSFGGRRFGRGFDSGILTGDHCAMGSVELHWVRSVDFPDLGAPVFLDFYA
CCCCEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
FVDGGVVWQKGEVLSGEPGRGHAASLGLGLSVQFTAEASGLLEVSRPVSLSVGTPDETRI
HHCCCEEEECCCEECCCCCCCCEEEEECCEEEEEECCCCCEEEECCCEEEEECCCCCCEE
LGALSFRF
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA