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The map label for this gene is yufQ [H]

Identifier: 150398528

GI number: 150398528

Start: 3539850

End: 3540821

Strand: Direct

Name: yufQ [H]

Synonym: Smed_3339

Alternate gene names: 150398528

Gene position: 3539850-3540821 (Clockwise)

Preceding gene: 150398527

Following gene: 150398529

Centisome position: 93.6

GC content: 63.48

Gene sequence:

>972_bases
ATGGATTTTCTTCACGTTCTCTTCGTGCTCCTGGAATCGACGATCCGCGTCTCCGTGCCTCTGGTGTTCGCGGCGCTTGC
CGGCCTCTTCACCGAGCGCGCCGGCGTCTTCGACATCGGGCTGGAAGGCAAGATGCTTGGTGCGGCCTTTGCCGCCGGTG
CGGCGGCGGCAGTCACGCAATCGGTTTGGGTCGGGCTCGTTGCGGCCGTCCTCGTTTCGGTGGCTCTGTCGCTGGTCCAT
GGCTATGCTTCGATCACCCAGCGCGGCAACCAGATCGTTTCCGGCGTCGCGATCAACTTCATCGTCGCCGGGTCCACCGT
TATCCTGGGCGAAGCCTGGTTCCGGCAGGGCGGCCGGACGCCGGCCCTTGCCGAAGGGGCGCGATTCCAGACGATCAATT
TTCCGGGTGCCGACGCGGTCCGCGAAATTCCGGTCCTCGGACCTGTCTATGCGGACCTCCTGTCCGGCCATTTCCTGCTC
ACCTATCTGGCCTTCGCAATGGTGCCGTTCAGCTGGTGGATTCTCTATCGCACCCGTTTCGGCCTGAGACTGCGTGCCGT
CGGCGAGAATCCGGGCGCCGTCGACACCGCCGGAATCTCGGTGATCTGGCTCAGATATCGCGCTGTCATCTGCTGCGGCA
TTCTCTGCGGCTTTGCCGGCGCCTATCTCTCGCTTGCGATGACGGCGGGCTTCGTCAAGGGCATGACGGCGGGCAAGGGC
TATATCGCGCTCGCGGCGCTCATCTTCGCAAAATGGCGCCCGCTCAACATAATGTTCGCCTGCCTGCTCTTCGGCTTCCT
CGACGCGCTCGCCATCCGTCTGCAAGGCACGCCCCTGCCGCTTATCGGCCAGGTTCCGGTACAGCTCATGCAGGCACTGC
CCTATATCCTCACCGTCGTTCTGCTTGCCGGATTTATCGGCAAGGCCATTCCGCCCAAGGCGGGCGGCGTACCCTATGTG
AAGGAGCGCTAA

Upstream 100 bases:

>100_bases
CCGGCGCGCTCGAGAACATGTTCCGGCCGGCGATCACGCGCGTTTTCGCGGCGCGCGGCCAGCGCGCGGCTGCGCTCGTG
CAGACCAAGGGAGCCTGATC

Downstream 100 bases:

>100_bases
TGCATGTCGCCCGGAAGTGTGCAGCGGTTCCGGGATGACGACATGCACAACAATAAGGAATGCCCCATGTCGAAGGACGA
ACTCTTTGTCGCGGCGCGCG

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MDFLHVLFVLLESTIRVSVPLVFAALAGLFTERAGVFDIGLEGKMLGAAFAAGAAAAVTQSVWVGLVAAVLVSVALSLVH
GYASITQRGNQIVSGVAINFIVAGSTVILGEAWFRQGGRTPALAEGARFQTINFPGADAVREIPVLGPVYADLLSGHFLL
TYLAFAMVPFSWWILYRTRFGLRLRAVGENPGAVDTAGISVIWLRYRAVICCGILCGFAGAYLSLAMTAGFVKGMTAGKG
YIALAALIFAKWRPLNIMFACLLFGFLDALAIRLQGTPLPLIGQVPVQLMQALPYILTVVLLAGFIGKAIPPKAGGVPYV
KER

Sequences:

>Translated_323_residues
MDFLHVLFVLLESTIRVSVPLVFAALAGLFTERAGVFDIGLEGKMLGAAFAAGAAAAVTQSVWVGLVAAVLVSVALSLVH
GYASITQRGNQIVSGVAINFIVAGSTVILGEAWFRQGGRTPALAEGARFQTINFPGADAVREIPVLGPVYADLLSGHFLL
TYLAFAMVPFSWWILYRTRFGLRLRAVGENPGAVDTAGISVIWLRYRAVICCGILCGFAGAYLSLAMTAGFVKGMTAGKG
YIALAALIFAKWRPLNIMFACLLFGFLDALAIRLQGTPLPLIGQVPVQLMQALPYILTVVLLAGFIGKAIPPKAGGVPYV
KER
>Mature_323_residues
MDFLHVLFVLLESTIRVSVPLVFAALAGLFTERAGVFDIGLEGKMLGAAFAAGAAAAVTQSVWVGLVAAVLVSVALSLVH
GYASITQRGNQIVSGVAINFIVAGSTVILGEAWFRQGGRTPALAEGARFQTINFPGADAVREIPVLGPVYADLLSGHFLL
TYLAFAMVPFSWWILYRTRFGLRLRAVGENPGAVDTAGISVIWLRYRAVICCGILCGFAGAYLSLAMTAGFVKGMTAGKG
YIALAALIFAKWRPLNIMFACLLFGFLDALAIRLQGTPLPLIGQVPVQLMQALPYILTVVLLAGFIGKAIPPKAGGVPYV
KER

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34219; Mature: 34219

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLHVLFVLLESTIRVSVPLVFAALAGLFTERAGVFDIGLEGKMLGAAFAAGAAAAVTQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
SVWVGLVAAVLVSVALSLVHGYASITQRGNQIVSGVAINFIVAGSTVILGEAWFRQGGRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEECHHHHHCCCCC
PALAEGARFQTINFPGADAVREIPVLGPVYADLLSGHFLLTYLAFAMVPFSWWILYRTRF
CCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRLRAVGENPGAVDTAGISVIWLRYRAVICCGILCGFAGAYLSLAMTAGFVKGMTAGKG
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
YIALAALIFAKWRPLNIMFACLLFGFLDALAIRLQGTPLPLIGQVPVQLMQALPYILTVV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LLAGFIGKAIPPKAGGVPYVKER
HHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFLHVLFVLLESTIRVSVPLVFAALAGLFTERAGVFDIGLEGKMLGAAFAAGAAAAVTQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
SVWVGLVAAVLVSVALSLVHGYASITQRGNQIVSGVAINFIVAGSTVILGEAWFRQGGRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEECHHHHHCCCCC
PALAEGARFQTINFPGADAVREIPVLGPVYADLLSGHFLLTYLAFAMVPFSWWILYRTRF
CCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRLRAVGENPGAVDTAGISVIWLRYRAVICCGILCGFAGAYLSLAMTAGFVKGMTAGKG
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
YIALAALIFAKWRPLNIMFACLLFGFLDALAIRLQGTPLPLIGQVPVQLMQALPYILTVV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LLAGFIGKAIPPKAGGVPYVKER
HHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]