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The map label for this gene is yufP [H]

Identifier: 150398527

GI number: 150398527

Start: 3538714

End: 3539847

Strand: Direct

Name: yufP [H]

Synonym: Smed_3338

Alternate gene names: 150398527

Gene position: 3538714-3539847 (Clockwise)

Preceding gene: 150398526

Following gene: 150398528

Centisome position: 93.57

GC content: 61.99

Gene sequence:

>1134_bases
ATGAGCACCCCTTATGCGAAACTCCCGGGATGGGTGGAATATGGCCTCATCCCGCTGATCAACCTTGCCGTCGCTTTTCT
CGTCGCCGGTCTCGTCGTTCTTCTCGTCGGCGAAAACCCGCTTGAAGCCGCCTATCATCTCATCAATGGTGCTTTCGGCC
GCGGCGAATATATCGGATTCACGCTCTATTACGCAACGACCTTCATCTTCACCGGTCTCGCGGTGGCAGTCGCCTTTCAT
TCAGGGCTTTTCAATATAGGCGGCGAGGGTCAGGCCTATGTCGGGGGCATCGGTGTGGCGCTCGCTTGCCTCTGGCTCGA
TCAAATGATGCCCTGGTATGTGGTCTTTCCGCTGGCCATCGTCGGCTCCGTCTTCTTCGGCGCGCTCTGGGCGTTCCTGC
CGGGCTGGCTGCAGGCCAGGCGCGGCAGCCATATCGTCATCACCACCATCATGTTCAATTTCATTGCATCGAGCCTGATG
GTCTACCTTCTGACGCGGGTGCTGAAACCACTTGGCTCTATGGCGCCGCAGACGCGGACGTTCGCCGAGGGAGGGCAATT
GCCGAAGCTCGACTGGCTGTTGTCGATCTTCGGGCTGAATATCGGTACGGCACCGTTCAACATCTCCTTCCTGCTGGCGC
TGGCCGCAGCCTTCGCCGTATGGGTGCTGATCTGGCGCACCAGGCTCGGCTACGAAATGCGCACCATGGGGCACAGCCCG
TCGGCAGCACGTTACGCCGGTATCAGCGAAAGCCGCATCACCGTCGTCGCCATGATGATGTCCGGCGGCCTCGCCGGCAT
GATGGCGCTGAACCCGATCATGGGCGAGCAGTTCCGCATGCAGCTCGACTTCGTGCAAGGCGCGGGCTTCGTCGGCATCG
CGGTGGCGCTGATGGGACGCTCGCATCCGGGCGGCATCATCCCCGCCGCGATCCTCTTCGGCGTTCTCTATCAGGGCGGC
GCCGAGATCGCCTTCGAGATGCCTTCGATCTCGAGGGACATGATCGTGATCATCCAGGGTCTCGTCATTCTCTTTGCCGG
CGCGCTCGAGAACATGTTCCGGCCGGCGATCACGCGCGTTTTCGCGGCGCGCGGCCAGCGCGCGGCTGCGCTCGTGCAGA
CCAAGGGAGCCTGA

Upstream 100 bases:

>100_bases
TGTTTTCCGGGCGTGTCGTCGGCGAGCGCAGCCCCGAGGCGACCGAGGGCGAGCTCGGCCTGCTGATGGCCGGCGTCGAA
GGCCGCAAGGAGGCTGCAGA

Downstream 100 bases:

>100_bases
TCATGGATTTTCTTCACGTTCTCTTCGTGCTCCTGGAATCGACGATCCGCGTCTCCGTGCCTCTGGTGTTCGCGGCGCTT
GCCGGCCTCTTCACCGAGCG

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSTPYAKLPGWVEYGLIPLINLAVAFLVAGLVVLLVGENPLEAAYHLINGAFGRGEYIGFTLYYATTFIFTGLAVAVAFH
SGLFNIGGEGQAYVGGIGVALACLWLDQMMPWYVVFPLAIVGSVFFGALWAFLPGWLQARRGSHIVITTIMFNFIASSLM
VYLLTRVLKPLGSMAPQTRTFAEGGQLPKLDWLLSIFGLNIGTAPFNISFLLALAAAFAVWVLIWRTRLGYEMRTMGHSP
SAARYAGISESRITVVAMMMSGGLAGMMALNPIMGEQFRMQLDFVQGAGFVGIAVALMGRSHPGGIIPAAILFGVLYQGG
AEIAFEMPSISRDMIVIIQGLVILFAGALENMFRPAITRVFAARGQRAAALVQTKGA

Sequences:

>Translated_377_residues
MSTPYAKLPGWVEYGLIPLINLAVAFLVAGLVVLLVGENPLEAAYHLINGAFGRGEYIGFTLYYATTFIFTGLAVAVAFH
SGLFNIGGEGQAYVGGIGVALACLWLDQMMPWYVVFPLAIVGSVFFGALWAFLPGWLQARRGSHIVITTIMFNFIASSLM
VYLLTRVLKPLGSMAPQTRTFAEGGQLPKLDWLLSIFGLNIGTAPFNISFLLALAAAFAVWVLIWRTRLGYEMRTMGHSP
SAARYAGISESRITVVAMMMSGGLAGMMALNPIMGEQFRMQLDFVQGAGFVGIAVALMGRSHPGGIIPAAILFGVLYQGG
AEIAFEMPSISRDMIVIIQGLVILFAGALENMFRPAITRVFAARGQRAAALVQTKGA
>Mature_376_residues
STPYAKLPGWVEYGLIPLINLAVAFLVAGLVVLLVGENPLEAAYHLINGAFGRGEYIGFTLYYATTFIFTGLAVAVAFHS
GLFNIGGEGQAYVGGIGVALACLWLDQMMPWYVVFPLAIVGSVFFGALWAFLPGWLQARRGSHIVITTIMFNFIASSLMV
YLLTRVLKPLGSMAPQTRTFAEGGQLPKLDWLLSIFGLNIGTAPFNISFLLALAAAFAVWVLIWRTRLGYEMRTMGHSPS
AARYAGISESRITVVAMMMSGGLAGMMALNPIMGEQFRMQLDFVQGAGFVGIAVALMGRSHPGGIIPAAILFGVLYQGGA
EIAFEMPSISRDMIVIIQGLVILFAGALENMFRPAITRVFAARGQRAAALVQTKGA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 40478; Mature: 40347

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCHHHHHHCCCCC
>Mature Secondary Structure 
STPYAKLPGWVEYGLIPLINLAVAFLVAGLVVLLVGENPLEAAYHLINGAFGRGEYIGF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHH
TLYYATTFIFTGLAVAVAFHSGLFNIGGEGQAYVGGIGVALACLWLDQMMPWYVVFPLAI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGSVFFGALWAFLPGWLQARRGSHIVITTIMFNFIASSLMVYLLTRVLKPLGSMAPQTRT
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
FAEGGQLPKLDWLLSIFGLNIGTAPFNISFLLALAAAFAVWVLIWRTRLGYEMRTMGHSP
HHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
SAARYAGISESRITVVAMMMSGGLAGMMALNPIMGEQFRMQLDFVQGAGFVGIAVALMGR
CCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
SHPGGIIPAAILFGVLYQGGAEIAFEMPSISRDMIVIIQGLVILFAGALENMFRPAITRV
CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAARGQRAAALVQTKGA
HHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]