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The map label for this gene is 150398411

Identifier: 150398411

GI number: 150398411

Start: 3392624

End: 3393001

Strand: Direct

Name: 150398411

Synonym: Smed_3219

Alternate gene names: NA

Gene position: 3392624-3393001 (Clockwise)

Preceding gene: 150398410

Following gene: 150398412

Centisome position: 89.71

GC content: 61.64

Gene sequence:

>378_bases
ATGACCCCATTCGGTGAGGCCGTACGGGAGCTCCGGCGGCGCAAGGGCGTGACGCAGAAGGAGATGGCGGCGGCCATCGG
GGTTTCGCCGGCCTACCTCTCGGCTCTCGAACATGGCAAGCGGGGCGCGCCGAGCTTCGATTTCCTCCAGCGCGTTGCCG
GCTATTTCAACGTGATCTGGGACGAGGCCGACGAACTTTTCCGGATCGCGCATATTTCAGACCCGAAAGTGGTGCTCGAC
ACCTCCGGTCTGCCGCCCGGTCATACCGCCTTCGCCAATCGTTTGAGCGGGCAGATTCGCAGCCTCTCGGCGGAGACGAT
CCGGGCACTGGAAGATGTTTTGGAAAAAGCCACATTTCCTGATAAGGACAGGGGATGA

Upstream 100 bases:

>100_bases
GAGTTCCGGCCGTTGATTTCGTCCTACGAACCGGCAGCGCGCAATCATGGCGGCGAGGGGGCGTTGTATGTGCGGCTGGC
GCGGGCGAAGGAAGCGCGTC

Downstream 100 bases:

>100_bases
AAGCCCATCCCGGCGGCAATTTTTGCGTTCGGGATTTGGAACCGACGGACAAATTTCCTATAGTCCGCGAGGCATCTCGC
GCTGTGATTCGCAATGGATC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; HTH-Type Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTPFGEAVRELRRRKGVTQKEMAAAIGVSPAYLSALEHGKRGAPSFDFLQRVAGYFNVIWDEADELFRIAHISDPKVVLD
TSGLPPGHTAFANRLSGQIRSLSAETIRALEDVLEKATFPDKDRG

Sequences:

>Translated_125_residues
MTPFGEAVRELRRRKGVTQKEMAAAIGVSPAYLSALEHGKRGAPSFDFLQRVAGYFNVIWDEADELFRIAHISDPKVVLD
TSGLPPGHTAFANRLSGQIRSLSAETIRALEDVLEKATFPDKDRG
>Mature_124_residues
TPFGEAVRELRRRKGVTQKEMAAAIGVSPAYLSALEHGKRGAPSFDFLQRVAGYFNVIWDEADELFRIAHISDPKVVLDT
SGLPPGHTAFANRLSGQIRSLSAETIRALEDVLEKATFPDKDRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13754; Mature: 13623

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFGEAVRELRRRKGVTQKEMAAAIGVSPAYLSALEHGKRGAPSFDFLQRVAGYFNVIW
CCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
DEADELFRIAHISDPKVVLDTSGLPPGHTAFANRLSGQIRSLSAETIRALEDVLEKATFP
HHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKDRG
CCCCC
>Mature Secondary Structure 
TPFGEAVRELRRRKGVTQKEMAAAIGVSPAYLSALEHGKRGAPSFDFLQRVAGYFNVIW
CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
DEADELFRIAHISDPKVVLDTSGLPPGHTAFANRLSGQIRSLSAETIRALEDVLEKATFP
HHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKDRG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA