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The map label for this gene is nusG [H]

Identifier: 150396194

GI number: 150396194

Start: 1050409

End: 1050939

Strand: Direct

Name: nusG [H]

Synonym: Smed_0973

Alternate gene names: 150396194

Gene position: 1050409-1050939 (Clockwise)

Preceding gene: 150396193

Following gene: 150396195

Centisome position: 27.77

GC content: 57.63

Gene sequence:

>531_bases
ATGGCTGCGCGCTGGTATATTGTTCACGCCTATTCGAATTTTGAAAAGAAGGTCGCCGAGTCGATCGAAGAAAAGGCCAG
GCAGAAGGGCCTGACGCACCTCTTCGAAAAAATCCTCGTGCCGACCGAAAAGGTGGTTGAGATCCGTCGCGGACGTAAGG
TTGATGCGGAGCGGAAGTTCTTTCCGGGTTACGTGCTCGTTCGCGCCGACCTGACCGATGAGGCCTATCACCTTATCAAG
AATACGCCGAAAGTGACGGGTTTTCTCGGAACGGACAGCAAGCCGGTGCCCATTCCGGATCATGAGGCCGATCGTATTCT
TGGTCAGGTGCAGGACGGCGTCGAACGCCCGAAGCCCTCGATCTCGTTCGAGATCGGCGAGCAGGTCCGCGTGTCCGACG
GCCCCTTCGCGTCGTTCAACGGCATCGTTCAGGATGTCGACGAAGAGCGGTCGCGCTTGAAGGTCGAGGTATCGATCTTT
GGTCGTGCGACGCCTGTCGAGCTGGAATACGGCCAGGTCGAGAAGGTCTGA

Upstream 100 bases:

>100_bases
GTCTCTTTTGCCGCCGCCTTTTTCTTTGGTGCGGACCAGTTGCTGGGTTGGGTGATGAGCCTGATCCTCAACGTTGGCGC
TTGATTGGGTGGAGAGTAGC

Downstream 100 bases:

>100_bases
CAGAACGTTGGCTTACGAGATGGGCAGGTCGAAACGTCGGCCTGCTCGGCGGAGCGATCCGCATCGCGTGGGAGGTTTCC
GGTCTTAGCCGGGTCGGTCT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAARWYIVHAYSNFEKKVAESIEEKARQKGLTHLFEKILVPTEKVVEIRRGRKVDAERKFFPGYVLVRADLTDEAYHLIK
NTPKVTGFLGTDSKPVPIPDHEADRILGQVQDGVERPKPSISFEIGEQVRVSDGPFASFNGIVQDVDEERSRLKVEVSIF
GRATPVELEYGQVEKV

Sequences:

>Translated_176_residues
MAARWYIVHAYSNFEKKVAESIEEKARQKGLTHLFEKILVPTEKVVEIRRGRKVDAERKFFPGYVLVRADLTDEAYHLIK
NTPKVTGFLGTDSKPVPIPDHEADRILGQVQDGVERPKPSISFEIGEQVRVSDGPFASFNGIVQDVDEERSRLKVEVSIF
GRATPVELEYGQVEKV
>Mature_175_residues
AARWYIVHAYSNFEKKVAESIEEKARQKGLTHLFEKILVPTEKVVEIRRGRKVDAERKFFPGYVLVRADLTDEAYHLIKN
TPKVTGFLGTDSKPVPIPDHEADRILGQVQDGVERPKPSISFEIGEQVRVSDGPFASFNGIVQDVDEERSRLKVEVSIFG
RATPVELEYGQVEKV

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=173, Percent_Identity=54.3352601156069, Blast_Score=200, Evalue=5e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 19952; Mature: 19821

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARWYIVHAYSNFEKKVAESIEEKARQKGLTHLFEKILVPTEKVVEIRRGRKVDAERKF
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
FPGYVLVRADLTDEAYHLIKNTPKVTGFLGTDSKPVPIPDHEADRILGQVQDGVERPKPS
CCCEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
ISFEIGEQVRVSDGPFASFNGIVQDVDEERSRLKVEVSIFGRATPVELEYGQVEKV
EEEECCCEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCCCCCCC
>Mature Secondary Structure 
AARWYIVHAYSNFEKKVAESIEEKARQKGLTHLFEKILVPTEKVVEIRRGRKVDAERKF
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
FPGYVLVRADLTDEAYHLIKNTPKVTGFLGTDSKPVPIPDHEADRILGQVQDGVERPKPS
CCCEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
ISFEIGEQVRVSDGPFASFNGIVQDVDEERSRLKVEVSIFGRATPVELEYGQVEKV
EEEECCCEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]