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The map label for this gene is 150396165

Identifier: 150396165

GI number: 150396165

Start: 1018798

End: 1019502

Strand: Direct

Name: 150396165

Synonym: Smed_0942

Alternate gene names: NA

Gene position: 1018798-1019502 (Clockwise)

Preceding gene: 150396163

Following gene: 150396166

Centisome position: 26.94

GC content: 60.14

Gene sequence:

>705_bases
ATGAAAATCAAATGGCTGGGGCACTCCGCCTTCCACGTCGAAACGGCGAAAGCCAAAATACTGATAGATCCGTTTTTCAC
CGGCAATCCGGCTTTTAGGGATGGCGAGCGCAGGGCGGTTACGGCGGGGTTGACCCACATCCTGCTCACGCACGGCCATG
GCGACCATGTCGGCGACACCGTCGCGATCGCCAAGGAAACCGGCGCAACGGTTCTTGCCAATTTTGATCTCTGCATGTGG
CTCGGTCGTCAGGGCGTGGCGAAACTGGAGCCGGGCAATACCGGTGGGACCATTCGTCTCGGGAGCTTTTCCGCCACTTT
CGTCAACGCTTTGCATTCGTCGGCCCAGATAACCGAGGATGGCGTTTCCCATTCGCTCGGCAATGCCAATGGTCTCGTTC
TCCATTTCGACGACGAGCCGACGCTCTACCATATGGGAGACACGGACATCTTTTCCGACATGGCGCTCGTTCAGGAACTG
CACGAGCCGGAAATCGGCATCGTGCCGATCGGCGACCGTTTCACCATGGGTGGTGCGGTGGCGGCGCTCGCATGCCAACG
CTACTTCAAGTTCGCGACGGCCATCCCCTGCCATTATGGTTCCTTTCCGATCATCGACCAGACCCCGGAGACCTTCGTGG
CCGGCATGGACGGCGCCTCGACCCTCGTCGCCACGCCCGAGGTCGGCGGCATCGTGAACGCGTAA

Upstream 100 bases:

>100_bases
CTTTCCACTGCGCTGGCCTGATCCATATGCTTGTCCTACAGATAAATCGATCAATTTGTGGCCGGAAAGATCCGGTACTT
CGCGATCTGAGGAGAAGATC

Downstream 100 bases:

>100_bases
ACGGCACGCCGCTCCAGTCTCTGCGCTATTCCCCCGTTGCGTGCCCGGCGTCTCGCCTTTATAGCGGGGGAAACTTTGCG
ATACCGGAGACCGCCATGTC

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKIKWLGHSAFHVETAKAKILIDPFFTGNPAFRDGERRAVTAGLTHILLTHGHGDHVGDTVAIAKETGATVLANFDLCMW
LGRQGVAKLEPGNTGGTIRLGSFSATFVNALHSSAQITEDGVSHSLGNANGLVLHFDDEPTLYHMGDTDIFSDMALVQEL
HEPEIGIVPIGDRFTMGGAVAALACQRYFKFATAIPCHYGSFPIIDQTPETFVAGMDGASTLVATPEVGGIVNA

Sequences:

>Translated_234_residues
MKIKWLGHSAFHVETAKAKILIDPFFTGNPAFRDGERRAVTAGLTHILLTHGHGDHVGDTVAIAKETGATVLANFDLCMW
LGRQGVAKLEPGNTGGTIRLGSFSATFVNALHSSAQITEDGVSHSLGNANGLVLHFDDEPTLYHMGDTDIFSDMALVQEL
HEPEIGIVPIGDRFTMGGAVAALACQRYFKFATAIPCHYGSFPIIDQTPETFVAGMDGASTLVATPEVGGIVNA
>Mature_234_residues
MKIKWLGHSAFHVETAKAKILIDPFFTGNPAFRDGERRAVTAGLTHILLTHGHGDHVGDTVAIAKETGATVLANFDLCMW
LGRQGVAKLEPGNTGGTIRLGSFSATFVNALHSSAQITEDGVSHSLGNANGLVLHFDDEPTLYHMGDTDIFSDMALVQEL
HEPEIGIVPIGDRFTMGGAVAALACQRYFKFATAIPCHYGSFPIIDQTPETFVAGMDGASTLVATPEVGGIVNA

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR022877 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 24830; Mature: 24830

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKWLGHSAFHVETAKAKILIDPFFTGNPAFRDGERRAVTAGLTHILLTHGHGDHVGDT
CEEEEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEHHCCEEEEEECCCCCCCCCE
VAIAKETGATVLANFDLCMWLGRQGVAKLEPGNTGGTIRLGSFSATFVNALHSSAQITED
EEEEECCCCEEEECCHHHEHHCCCCCEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCCC
GVSHSLGNANGLVLHFDDEPTLYHMGDTDIFSDMALVQELHEPEIGIVPIGDRFTMGGAV
CHHHCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCHHH
AALACQRYFKFATAIPCHYGSFPIIDQTPETFVAGMDGASTLVATPEVGGIVNA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEECCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKIKWLGHSAFHVETAKAKILIDPFFTGNPAFRDGERRAVTAGLTHILLTHGHGDHVGDT
CEEEEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEHHCCEEEEEECCCCCCCCCE
VAIAKETGATVLANFDLCMWLGRQGVAKLEPGNTGGTIRLGSFSATFVNALHSSAQITED
EEEEECCCCEEEECCHHHEHHCCCCCEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCCC
GVSHSLGNANGLVLHFDDEPTLYHMGDTDIFSDMALVQELHEPEIGIVPIGDRFTMGGAV
CHHHCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCHHH
AALACQRYFKFATAIPCHYGSFPIIDQTPETFVAGMDGASTLVATPEVGGIVNA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEECCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]