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The map label for this gene is 150396103

Identifier: 150396103

GI number: 150396103

Start: 944588

End: 944986

Strand: Direct

Name: 150396103

Synonym: Smed_0880

Alternate gene names: NA

Gene position: 944588-944986 (Clockwise)

Preceding gene: 150396102

Following gene: 150396104

Centisome position: 24.98

GC content: 68.17

Gene sequence:

>399_bases
ATGGAAATCTTCGAGTGCGGATCGAGACCCTCGACGCGCGGGCCCGCCGAATACTTCACCGGATCCGTACGCCTGGACCC
TGCCTTCGAGGCGCCGTCACCCGCACGGCTACGCGGCGCAACCGTGACCTTCGAGCCCGGCGCGCGCACCGCCTGGCACA
CCCACCCGCTCGGCCAGACCCTGATCGTCACCGCCGGCCGCGGCCTCGCCCAAAGCTGGGGCGGAGAACTGCGCGAGATC
CGCGCCGGCGACGTGGTGTGGTTCCCGCCGGGTGAAAAGCACTGGCATGGGGCAGCGCCCGATACGGGGATGACCCATAT
CGCCATTCAGGAAGCGCTCGATGGAAAGGCGGTGGACTGGCTCGAGCATGTGACGGACGAGCAGTATGGGGGTGTGTAG

Upstream 100 bases:

>100_bases
GGGCGTGACGATCCACCGGTTGTAGCCGCTTCGCAAAAAGAGGTAAGCTGCCTGCGCCCTGCATCAAGCGCCGGGCGGCG
CGCCCTCAAAGGAGGCTATC

Downstream 100 bases:

>100_bases
GTCTGGCTCGGTTCCTATGGCCAGAACAGGAATGAGTCTTGCTGCTTGCTCGCAACTACACAGATGTAGGCTACACATGT
GGAGCAACACAAAGTGACCC

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Family Protein; Cupin Region; Cupin Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Double-Stranded Beta-Helix-Like Protein; Exported RmlC-Type Cupin; Conserved Protein; ABC-2 Type Transporter; Secreted Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MEIFECGSRPSTRGPAEYFTGSVRLDPAFEAPSPARLRGATVTFEPGARTAWHTHPLGQTLIVTAGRGLAQSWGGELREI
RAGDVVWFPPGEKHWHGAAPDTGMTHIAIQEALDGKAVDWLEHVTDEQYGGV

Sequences:

>Translated_132_residues
MEIFECGSRPSTRGPAEYFTGSVRLDPAFEAPSPARLRGATVTFEPGARTAWHTHPLGQTLIVTAGRGLAQSWGGELREI
RAGDVVWFPPGEKHWHGAAPDTGMTHIAIQEALDGKAVDWLEHVTDEQYGGV
>Mature_132_residues
MEIFECGSRPSTRGPAEYFTGSVRLDPAFEAPSPARLRGATVTFEPGARTAWHTHPLGQTLIVTAGRGLAQSWGGELREI
RAGDVVWFPPGEKHWHGAAPDTGMTHIAIQEALDGKAVDWLEHVTDEQYGGV

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14304; Mature: 14304

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFECGSRPSTRGPAEYFTGSVRLDPAFEAPSPARLRGATVTFEPGARTAWHTHPLGQT
CCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCCE
LIVTAGRGLAQSWGGELREIRAGDVVWFPPGEKHWHGAAPDTGMTHIAIQEALDGKAVDW
EEEECCCCHHHHCCCHHEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEHHHCCCCHHHH
LEHVTDEQYGGV
HHHHCCCCCCCC
>Mature Secondary Structure
MEIFECGSRPSTRGPAEYFTGSVRLDPAFEAPSPARLRGATVTFEPGARTAWHTHPLGQT
CCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCCE
LIVTAGRGLAQSWGGELREIRAGDVVWFPPGEKHWHGAAPDTGMTHIAIQEALDGKAVDW
EEEECCCCHHHHCCCHHEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEHHHCCCCHHHH
LEHVTDEQYGGV
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA