| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396099
Identifier: 150396099
GI number: 150396099
Start: 936710
End: 938905
Strand: Direct
Name: 150396099
Synonym: Smed_0876
Alternate gene names: NA
Gene position: 936710-938905 (Clockwise)
Preceding gene: 150396098
Following gene: 150396101
Centisome position: 24.77
GC content: 62.25
Gene sequence:
>2196_bases ATGAAAGCATTTTCCATCACCACAACATTGGCTGCCGCACTTGCCGCATCGACGGCGACCGCCGTTCAGGCAGAACAGGT CTTCAACCGCATCGCATCCTTTGCGGTGGCTGAGAATTTGCCTGGGGGGGCCGGGCGGACGGCGCCTACTTCGGCAGAAA TCATCACCGCGAGCGAAGACAGCAATACGCTGATCTATTCCGACAGTCCCGGCAAACGCATCGGTTTCATCGACATCACC GATCCCAGGACGCCCAAGGCGGGCGGTATCGTCTCTTTCGAAGGTGAGCCGACCTCGGTCGCGATTGCCGGTGCCAAGGC GCTCGTTGCCGTCAACACGAGCGAAAGCTTCACCAAGCCCTCCGGTCTCGTTGCCGTGGTCGATGTCGCCGGGAGAAAGG TGGACGCGACATGCGATCTCGGTGGCCAGCCGGACTCGGTGGCTGTGAACGGGGATCGAACGCTTGCTGCAATCGCGATC GAGAACGAGCGCGACGAGGAGGTCAATGACGGGCAGATCCCGCAGATGCCCGCGGGCGATCTCGTCATCCTGTCGCTGAA GGATGGCGCCGCCGATTGCGCGACCATCAAGCACGTGACATTGACCGGTCTCGCAGAGGCCGCTGGCGAAGATCCCGAGC CGGAATTCGTGGCCTTCAACGGCAAGGACGAGATTGCGCTCACCCTGCAGGAGAACAACCACGTCGTCATCATCGACGGC AAGTCGGCAACGGTGAAGACGCATTTCCCGGCGGGCACGGTCGATCTCGCAGGTATCGACACCAGGCGCGACGGCGCCAT CGCGTTCGCCGGCGATCAGGCCGGCCGCAAGCGCGAGCCTGACGCCGTCAAATGGCTCGACGACGATCGCCTGGTCGTCG CCAACGAGGGCGACTACGAAGGCGGGAGCCGCGGCTTCACCATCTTCGACACCACGGGCAAAGTTGTCTACGAATCCGGC GCTAGCTTCGAACGGGCCATTGCATCGATAGGCCATTATCCCGAGAAGCGCTCGTCGGCGAAAGGCGTCGAACCGGAGGG GCTGGAAGTGGCGCAATACGGCGAAGACAAGCTGTTCTTCGTTCTTTCCGAGCGCGCCTCGGTCGTCGGCGTATACAAGG ATACCGGCGCCGAGCCGGAGCTCCTTCAGCTTCTGCCCTCCGGCATTTCGCCAGAGGGAGCAGTCGCCATTCCCGGGCGC AATCTTTTCGCCACCGCCAACGAGGTCGATCTGGTCGAAGACGGTGGAGCGCGGGCGCATGTCATGATCTACGAGCGCGA GGAAGGCGAGGCTGCCTATCCGCAGATACGTTCCGCGGACCAGGGCGGGTTGCCCCTAGGCTTCGGGGCGCTTTCCGGCC TCGCGGCCGTGGCGGACAAGCCGGGTTTCCTGCACGCGGTCAGCGATTCCGTCTTCTCGTCCCAGCCGACCATCTTTGCG ATCGACGCCACGCAAAAGCCTGCGCTGATCACAGGCGCCCTGCCGATCACCCGCGATGGCGCACCCCCCCAGAAGCTCGA CATCGAAGGCATCGCCAATGACGGCGAGGGCGGCTTCTGGCTCGCTTCCGAAGGCAACAGCGACAAGCTTTACAGCCATG CGCTGCTTCGCGTGAACAAGAAGGGGGAGATCAAGGAGGAGATCGCTCTGCCGGAAGAACTGCGCTCCAACGAGATCCGC TACGGCTTCGAAGGCATAGCAGCTGTGGGCGAGGGTGACGACCAGCTTCTGTGGATGGCGGTGCAGCGCGAATGGAAGGA CGACGAGAAAGGGTCCGTCAAGCTGGTCTCCTATAAGCCGTCGAGCAAAGAGTGGGGTGCTGTGCGTTACCCGCTCGACA AGTCAGCCGAGGGCTGGGTCGGCCTGTCGGAAATCACCGTCCATGGCGACTATGCCTATATTCTCGAACGCGACAATCTG ATCGGCGAAGCGGCAAGGCTCAAAAAGCTCTACCGCGTGGCTCTTGCGGATATGAAGCCTGCGGCGCTGGGCGGCGCATT GCCAGTTTTGAAGAAGGAAGAGGTCCGCGACCTGATCCCTGATCTGAAGTCGCTGAACGGCTATGTCGCAGACAAGGTGG AAGGCTTCGCCGTCGACGCGGCGGGGAACGGCTATGTCGTCACCGATAATGACGGCGTCGACGATTCCTCCGGCGAGACC CTGTTCTTCTCCATCGGTGTTATGGACGCGATGTAG
Upstream 100 bases:
>100_bases TCCAGCTGTTACAGGACAGTTGCAAAAGCCTTCCGTCCGATGATCTCGGATGCGAGCGTCTCGCAGAAACGCGATGGCGT GCCGCGACAAGGAGGGACAG
Downstream 100 bases:
>100_bases GCGAAACAAGGACAGCCTGTCATCCGGCCTGTCGGCTACCTTCTCCCCGCAAGCGGGGCGAAGCTGCCGGCAGGCCGGAT GAGGCGCAAGCCTCGTAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Alkaline Phosphatase; Endonuclease/Exonuclease/Phosphatase; Alkaline Phosphatase-Like Protein; Alkaline Phosphatase Protein
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MKAFSITTTLAAALAASTATAVQAEQVFNRIASFAVAENLPGGAGRTAPTSAEIITASEDSNTLIYSDSPGKRIGFIDIT DPRTPKAGGIVSFEGEPTSVAIAGAKALVAVNTSESFTKPSGLVAVVDVAGRKVDATCDLGGQPDSVAVNGDRTLAAIAI ENERDEEVNDGQIPQMPAGDLVILSLKDGAADCATIKHVTLTGLAEAAGEDPEPEFVAFNGKDEIALTLQENNHVVIIDG KSATVKTHFPAGTVDLAGIDTRRDGAIAFAGDQAGRKREPDAVKWLDDDRLVVANEGDYEGGSRGFTIFDTTGKVVYESG ASFERAIASIGHYPEKRSSAKGVEPEGLEVAQYGEDKLFFVLSERASVVGVYKDTGAEPELLQLLPSGISPEGAVAIPGR NLFATANEVDLVEDGGARAHVMIYEREEGEAAYPQIRSADQGGLPLGFGALSGLAAVADKPGFLHAVSDSVFSSQPTIFA IDATQKPALITGALPITRDGAPPQKLDIEGIANDGEGGFWLASEGNSDKLYSHALLRVNKKGEIKEEIALPEELRSNEIR YGFEGIAAVGEGDDQLLWMAVQREWKDDEKGSVKLVSYKPSSKEWGAVRYPLDKSAEGWVGLSEITVHGDYAYILERDNL IGEAARLKKLYRVALADMKPAALGGALPVLKKEEVRDLIPDLKSLNGYVADKVEGFAVDAAGNGYVVTDNDGVDDSSGET LFFSIGVMDAM
Sequences:
>Translated_731_residues MKAFSITTTLAAALAASTATAVQAEQVFNRIASFAVAENLPGGAGRTAPTSAEIITASEDSNTLIYSDSPGKRIGFIDIT DPRTPKAGGIVSFEGEPTSVAIAGAKALVAVNTSESFTKPSGLVAVVDVAGRKVDATCDLGGQPDSVAVNGDRTLAAIAI ENERDEEVNDGQIPQMPAGDLVILSLKDGAADCATIKHVTLTGLAEAAGEDPEPEFVAFNGKDEIALTLQENNHVVIIDG KSATVKTHFPAGTVDLAGIDTRRDGAIAFAGDQAGRKREPDAVKWLDDDRLVVANEGDYEGGSRGFTIFDTTGKVVYESG ASFERAIASIGHYPEKRSSAKGVEPEGLEVAQYGEDKLFFVLSERASVVGVYKDTGAEPELLQLLPSGISPEGAVAIPGR NLFATANEVDLVEDGGARAHVMIYEREEGEAAYPQIRSADQGGLPLGFGALSGLAAVADKPGFLHAVSDSVFSSQPTIFA IDATQKPALITGALPITRDGAPPQKLDIEGIANDGEGGFWLASEGNSDKLYSHALLRVNKKGEIKEEIALPEELRSNEIR YGFEGIAAVGEGDDQLLWMAVQREWKDDEKGSVKLVSYKPSSKEWGAVRYPLDKSAEGWVGLSEITVHGDYAYILERDNL IGEAARLKKLYRVALADMKPAALGGALPVLKKEEVRDLIPDLKSLNGYVADKVEGFAVDAAGNGYVVTDNDGVDDSSGET LFFSIGVMDAM >Mature_731_residues MKAFSITTTLAAALAASTATAVQAEQVFNRIASFAVAENLPGGAGRTAPTSAEIITASEDSNTLIYSDSPGKRIGFIDIT DPRTPKAGGIVSFEGEPTSVAIAGAKALVAVNTSESFTKPSGLVAVVDVAGRKVDATCDLGGQPDSVAVNGDRTLAAIAI ENERDEEVNDGQIPQMPAGDLVILSLKDGAADCATIKHVTLTGLAEAAGEDPEPEFVAFNGKDEIALTLQENNHVVIIDG KSATVKTHFPAGTVDLAGIDTRRDGAIAFAGDQAGRKREPDAVKWLDDDRLVVANEGDYEGGSRGFTIFDTTGKVVYESG ASFERAIASIGHYPEKRSSAKGVEPEGLEVAQYGEDKLFFVLSERASVVGVYKDTGAEPELLQLLPSGISPEGAVAIPGR NLFATANEVDLVEDGGARAHVMIYEREEGEAAYPQIRSADQGGLPLGFGALSGLAAVADKPGFLHAVSDSVFSSQPTIFA IDATQKPALITGALPITRDGAPPQKLDIEGIANDGEGGFWLASEGNSDKLYSHALLRVNKKGEIKEEIALPEELRSNEIR YGFEGIAAVGEGDDQLLWMAVQREWKDDEKGSVKLVSYKPSSKEWGAVRYPLDKSAEGWVGLSEITVHGDYAYILERDNL IGEAARLKKLYRVALADMKPAALGGALPVLKKEEVRDLIPDLKSLNGYVADKVEGFAVDAAGNGYVVTDNDGVDDSSGET LFFSIGVMDAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77035; Mature: 77035
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFSITTTLAAALAASTATAVQAEQVFNRIASFAVAENLPGGAGRTAPTSAEIITASED CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC SNTLIYSDSPGKRIGFIDITDPRTPKAGGIVSFEGEPTSVAIAGAKALVAVNTSESFTKP CCEEEEECCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEECCEEEEEEECCCCCCCC SGLVAVVDVAGRKVDATCDLGGQPDSVAVNGDRTLAAIAIENERDEEVNDGQIPQMPAGD CCCEEEEEECCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC LVILSLKDGAADCATIKHVTLTGLAEAAGEDPEPEFVAFNGKDEIALTLQENNHVVIIDG EEEEEECCCCCCCEEEEEEEEEHHHHHCCCCCCCCEEEECCCCEEEEEEECCCEEEEEEC KSATVKTHFPAGTVDLAGIDTRRDGAIAFAGDQAGRKREPDAVKWLDDDRLVVANEGDYE CCCEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCC GGSRGFTIFDTTGKVVYESGASFERAIASIGHYPEKRSSAKGVEPEGLEVAQYGEDKLFF CCCCCEEEEECCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEE VLSERASVVGVYKDTGAEPELLQLLPSGISPEGAVAIPGRNLFATANEVDLVEDGGARAH EEECCCEEEEEECCCCCCHHHHHHCCCCCCCCCEEEECCCCEEEECCCEEEEECCCCEEE VMIYEREEGEAAYPQIRSADQGGLPLGFGALSGLAAVADKPGFLHAVSDSVFSSQPTIFA EEEEECCCCCCCCCHHCCCCCCCCEECHHHHHHHHHHCCCCCEEEEECHHHHCCCCCEEE IDATQKPALITGALPITRDGAPPQKLDIEGIANDGEGGFWLASEGNSDKLYSHALLRVNK EECCCCCEEEEECCEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHEEEEEEECC KGEIKEEIALPEELRSNEIRYGFEGIAAVGEGDDQLLWMAVQREWKDDEKGSVKLVSYKP CCCCHHHHCCCHHHCCCCEEECCCEEEEECCCCCCEEEEEEHHCCCCCCCCCEEEEEECC SSKEWGAVRYPLDKSAEGWVGLSEITVHGDYAYILERDNLIGEAARLKKLYRVALADMKP CCCCCCEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC AALGGALPVLKKEEVRDLIPDLKSLNGYVADKVEGFAVDAAGNGYVVTDNDGVDDSSGET HHCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCEEEECCCCCCCCCCCE LFFSIGVMDAM EEEEEEEECCC >Mature Secondary Structure MKAFSITTTLAAALAASTATAVQAEQVFNRIASFAVAENLPGGAGRTAPTSAEIITASED CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC SNTLIYSDSPGKRIGFIDITDPRTPKAGGIVSFEGEPTSVAIAGAKALVAVNTSESFTKP CCEEEEECCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEECCEEEEEEECCCCCCCC SGLVAVVDVAGRKVDATCDLGGQPDSVAVNGDRTLAAIAIENERDEEVNDGQIPQMPAGD CCCEEEEEECCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC LVILSLKDGAADCATIKHVTLTGLAEAAGEDPEPEFVAFNGKDEIALTLQENNHVVIIDG EEEEEECCCCCCCEEEEEEEEEHHHHHCCCCCCCCEEEECCCCEEEEEEECCCEEEEEEC KSATVKTHFPAGTVDLAGIDTRRDGAIAFAGDQAGRKREPDAVKWLDDDRLVVANEGDYE CCCEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCC GGSRGFTIFDTTGKVVYESGASFERAIASIGHYPEKRSSAKGVEPEGLEVAQYGEDKLFF CCCCCEEEEECCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEE VLSERASVVGVYKDTGAEPELLQLLPSGISPEGAVAIPGRNLFATANEVDLVEDGGARAH EEECCCEEEEEECCCCCCHHHHHHCCCCCCCCCEEEECCCCEEEECCCEEEEECCCCEEE VMIYEREEGEAAYPQIRSADQGGLPLGFGALSGLAAVADKPGFLHAVSDSVFSSQPTIFA EEEEECCCCCCCCCHHCCCCCCCCEECHHHHHHHHHHCCCCCEEEEECHHHHCCCCCEEE IDATQKPALITGALPITRDGAPPQKLDIEGIANDGEGGFWLASEGNSDKLYSHALLRVNK EECCCCCEEEEECCEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHEEEEEEECC KGEIKEEIALPEELRSNEIRYGFEGIAAVGEGDDQLLWMAVQREWKDDEKGSVKLVSYKP CCCCHHHHCCCHHHCCCCEEECCCEEEEECCCCCCEEEEEEHHCCCCCCCCCEEEEEECC SSKEWGAVRYPLDKSAEGWVGLSEITVHGDYAYILERDNLIGEAARLKKLYRVALADMKP CCCCCCEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC AALGGALPVLKKEEVRDLIPDLKSLNGYVADKVEGFAVDAAGNGYVVTDNDGVDDSSGET HHCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCEEEECCCCCCCCCCCE LFFSIGVMDAM EEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA