Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150396068
Identifier: 150396068
GI number: 150396068
Start: 902527
End: 902901
Strand: Direct
Name: 150396068
Synonym: Smed_0844
Alternate gene names: NA
Gene position: 902527-902901 (Clockwise)
Preceding gene: 150396067
Following gene: 150396069
Centisome position: 23.86
GC content: 60.53
Gene sequence:
>375_bases ATGAACACATGGCCCAAGGACGAATTGCGGCAGATTGCCGAAAGCGACGACCTGCACATCGCCCCGTTCCGCGAGAACGG CAGGACCTATGGCACGCTCACCTGGATCTGGTCGGTTGTGGTTGATGGCGAACTCTATGTTCGCGGCTACAACGGCCAAC AGTCGCGTTGGTATCAGGCCGCGATCCGTCAGAAGGCGGGCCGCATCACGGCCGCCGGCATGACGAAGGAGGTTTCGTTC GAGCCGGTCGAAGGCGCAATCAACGACCAGATCGATGAAGGCTACCGCCGCAAATACGCCACGAGCCGTTATCTCGCGCC GATGATCGGTGAACGCGCCCGCGCGGCAACCGTAAAAATCACCCCGAAGGATTGA
Upstream 100 bases:
>100_bases CGAGCAGTATGCAGGGTGATGCCATGCCCGATGCTCGAAGGATCTTCTTCGCCGGCGCGCTGCAAGGCGCTGCTATGCCC ATAATCAGGGAGCGCTCCCA
Downstream 100 bases:
>100_bases GGACGCCAAGATGCAAAAGCGCAAACTCGGTCAGGGTCTTGAGGTTTCAGCCCTTTCTCTTGGCTGCATGGGCTATGGAA AGGCCCGCGACATCCCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNTWPKDELRQIAESDDLHIAPFRENGRTYGTLTWIWSVVVDGELYVRGYNGQQSRWYQAAIRQKAGRITAAGMTKEVSF EPVEGAINDQIDEGYRRKYATSRYLAPMIGERARAATVKITPKD
Sequences:
>Translated_124_residues MNTWPKDELRQIAESDDLHIAPFRENGRTYGTLTWIWSVVVDGELYVRGYNGQQSRWYQAAIRQKAGRITAAGMTKEVSF EPVEGAINDQIDEGYRRKYATSRYLAPMIGERARAATVKITPKD >Mature_124_residues MNTWPKDELRQIAESDDLHIAPFRENGRTYGTLTWIWSVVVDGELYVRGYNGQQSRWYQAAIRQKAGRITAAGMTKEVSF EPVEGAINDQIDEGYRRKYATSRYLAPMIGERARAATVKITPKD
Specific function: Unknown
COG id: COG4334
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14170; Mature: 14170
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTWPKDELRQIAESDDLHIAPFRENGRTYGTLTWIWSVVVDGELYVRGYNGQQSRWYQA CCCCCHHHHHHHHCCCCEEEEEECCCCCEEEHHHHEEEHEECCEEEEECCCCCHHHHHHH AIRQKAGRITAAGMTKEVSFEPVEGAINDQIDEGYRRKYATSRYLAPMIGERARAATVKI HHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE TPKD ECCC >Mature Secondary Structure MNTWPKDELRQIAESDDLHIAPFRENGRTYGTLTWIWSVVVDGELYVRGYNGQQSRWYQA CCCCCHHHHHHHHCCCCEEEEEECCCCCEEEHHHHEEEHEECCEEEEECCCCCHHHHHHH AIRQKAGRITAAGMTKEVSFEPVEGAINDQIDEGYRRKYATSRYLAPMIGERARAATVKI HHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE TPKD ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA