Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150396064
Identifier: 150396064
GI number: 150396064
Start: 899489
End: 899878
Strand: Direct
Name: 150396064
Synonym: Smed_0840
Alternate gene names: NA
Gene position: 899489-899878 (Clockwise)
Preceding gene: 150396060
Following gene: 150396065
Centisome position: 23.78
GC content: 60.26
Gene sequence:
>390_bases ATGGGCTTGAAAAGTCTTCTCATCGTCGCAGCCTTGATCATCGCTCCGCTTGCCGTCCAACCGGTCGCCGCACAGGAGGC GAAGGGTCCCGTGATCCGGATCGCGGAACTAGAAATCGACCCGGCGCAGATGGCCGCCTACTCGGCCGCCGTGAAAGAGG AGATGGAGGAATCCATCCGCGTCGAGCCGGGCGTCCTGGCGCTTTACGCGGTGTCGATCAAGGGTCAGCCGAATCATCTC AGATTCTTCGAGATGTATGCCGACCAGGCCGCCTACGAGGCCCACCGGGAATCGCCGCATTTCAGGAAATACGTCGAGAC CACCAAGAACATGATCACGTCGCGCAAGCTCTTCGAGACGGACAACTTCCAGCTCAGCGCCAAGCGGTGA
Upstream 100 bases:
>100_bases CTCATATTGACGTCTAATCGAAACAAACGGCGAGGTCTATATTTCATCGTACAGGAGGCACTGGCGTCTTCGGAAACCAA AATCAGTTCGGAGCCGTGTC
Downstream 100 bases:
>100_bases TGAGCAGATGAACCGGAACGAGTGCAGTTTGCGATTTGTCCTGTCAAAGCTTTGGGTCGGAGTGGTCGTGGCGCTCCTTG CCTGCGAAGCCACTGCCTCC
Product: antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: Flavoredoxin; Antibiotic Biosynthesis Monooxygenase Protein; Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIRVEPGVLALYAVSIKGQPNHL RFFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFETDNFQLSAKR
Sequences:
>Translated_129_residues MGLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIRVEPGVLALYAVSIKGQPNHL RFFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFETDNFQLSAKR >Mature_128_residues GLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIRVEPGVLALYAVSIKGQPNHLR FFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFETDNFQLSAKR
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14390; Mature: 14259
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIR CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHC VEPGVLALYAVSIKGQPNHLRFFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFET CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC DNFQLSAKR CCEEEEECC >Mature Secondary Structure GLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIR CHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHC VEPGVLALYAVSIKGQPNHLRFFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFET CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC DNFQLSAKR CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA