Click here to switch to the map view.

The map label for this gene is piv [H]

Identifier: 150396027

GI number: 150396027

Start: 865543

End: 866475

Strand: Direct

Name: piv [H]

Synonym: Smed_0803

Alternate gene names: 150396027

Gene position: 865543-866475 (Clockwise)

Preceding gene: 150396026

Following gene: 150396031

Centisome position: 22.89

GC content: 60.02

Gene sequence:

>933_bases
ATGATACATCCTGATGTCATCGGATGCGATATTGCAAAAGCGCATCTAGATTTTTTCGACAGCGGCCTTGAGCGCCATTT
CCGTATCGACAACACTCCGGCCGCAATTTCCGCGTGGCTCGACGGCCTTGATGGCAGAGGCGTTCATATCGTCTTTGAGG
CGACCGGGCGTTACGATCGGCAGTTGCGCATAGCCCTGGAGACCCGGGAGTTGCCCTATTCCCGCGTCAATCCTGCCCGC
GCCCGCGACTTTGCCAAGGCGATCGGCCTTCTTGCCAAGACGGATGCGATCGATGCACGTCTGCTTGCCCGGATGGGTCA
AAGCCTGCCACTCTCAACTCAGGCGCCTGACGATCCCGCCCGCCACGTGCTCGCCCGCCTTCACACGCGGCGTGACCAGC
TCGTGGCCATGCGCCAGCAAGAGCGGACACGCCTTCATGAGACCGAGGGGATCGAGCGTGACAGTGCTGAAAGCCATATG
GCTTGGCTCGACGCGGAGGTTGCGCGCATCGAAATGGCATGCCGTGATGTTCTGAAGGCCGAGAAGACCTTGCAAGAACA
AGAGGCAAGGCTGCGTTCCATTCCCGGCATCGGCCCCGTGGCCGCATTGACCCTGATCGCGCATATGCCAGAACTCGGCA
ATCGTTCGGCCAAGGCGATTGCAGCCCTTGCCGGTCTTGCGCCCTTCAATGTCGACAGCGGCACGTCACGGGGAAAGCGG
CATATACGCGGCGGTCGCAAGCGGATACGTGACGCGCTCTACATGGCGGCGCTCACAGCCAGCCGTATGCCCCGTGCTTT
TAAGTCCCATGCTGACCAAATGAAGGAGGCAGGCAAGCCCTTCAAGGTCGTCATCATTGCGCTTGCCCGCAAATTGCTCG
CCATCGCAAACGCCATCATCAGGGACAAAACAACCTTCCGACGAACCACCTGA

Upstream 100 bases:

>100_bases
CGTGTGCTGGCTCTGGTCCTCCGCCCGCTTCGAATCCCTAACCTGAACAGTTGACGGAGGCCGTCACAGCGGACCTCGCA
TCACAGGATAAGGCAGTCCC

Downstream 100 bases:

>100_bases
CAAACACAGTTGCCAGCCGGGCCACGCCATTGGGCCGCCGAGGAGTCATCCGCTAAAGCATTTCACCGTCAGAAATCCAT
GCCCGGCGCGGGCGGCATCT

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: PIVML [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIHPDVIGCDIAKAHLDFFDSGLERHFRIDNTPAAISAWLDGLDGRGVHIVFEATGRYDRQLRIALETRELPYSRVNPAR
ARDFAKAIGLLAKTDAIDARLLARMGQSLPLSTQAPDDPARHVLARLHTRRDQLVAMRQQERTRLHETEGIERDSAESHM
AWLDAEVARIEMACRDVLKAEKTLQEQEARLRSIPGIGPVAALTLIAHMPELGNRSAKAIAALAGLAPFNVDSGTSRGKR
HIRGGRKRIRDALYMAALTASRMPRAFKSHADQMKEAGKPFKVVIIALARKLLAIANAIIRDKTTFRRTT

Sequences:

>Translated_310_residues
MIHPDVIGCDIAKAHLDFFDSGLERHFRIDNTPAAISAWLDGLDGRGVHIVFEATGRYDRQLRIALETRELPYSRVNPAR
ARDFAKAIGLLAKTDAIDARLLARMGQSLPLSTQAPDDPARHVLARLHTRRDQLVAMRQQERTRLHETEGIERDSAESHM
AWLDAEVARIEMACRDVLKAEKTLQEQEARLRSIPGIGPVAALTLIAHMPELGNRSAKAIAALAGLAPFNVDSGTSRGKR
HIRGGRKRIRDALYMAALTASRMPRAFKSHADQMKEAGKPFKVVIIALARKLLAIANAIIRDKTTFRRTT
>Mature_310_residues
MIHPDVIGCDIAKAHLDFFDSGLERHFRIDNTPAAISAWLDGLDGRGVHIVFEATGRYDRQLRIALETRELPYSRVNPAR
ARDFAKAIGLLAKTDAIDARLLARMGQSLPLSTQAPDDPARHVLARLHTRRDQLVAMRQQERTRLHETEGIERDSAESHM
AWLDAEVARIEMACRDVLKAEKTLQEQEARLRSIPGIGPVAALTLIAHMPELGNRSAKAIAALAGLAPFNVDSGTSRGKR
HIRGGRKRIRDALYMAALTASRMPRAFKSHADQMKEAGKPFKVVIIALARKLLAIANAIIRDKTTFRRTT

Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 34447; Mature: 34447

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHPDVIGCDIAKAHLDFFDSGLERHFRIDNTPAAISAWLDGLDGRGVHIVFEATGRYDR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCC
QLRIALETRELPYSRVNPARARDFAKAIGLLAKTDAIDARLLARMGQSLPLSTQAPDDPA
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
RHVLARLHTRRDQLVAMRQQERTRLHETEGIERDSAESHMAWLDAEVARIEMACRDVLKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EKTLQEQEARLRSIPGIGPVAALTLIAHMPELGNRSAKAIAALAGLAPFNVDSGTSRGKR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHH
HIRGGRKRIRDALYMAALTASRMPRAFKSHADQMKEAGKPFKVVIIALARKLLAIANAII
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RDKTTFRRTT
HCCCHHCCCC
>Mature Secondary Structure
MIHPDVIGCDIAKAHLDFFDSGLERHFRIDNTPAAISAWLDGLDGRGVHIVFEATGRYDR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCC
QLRIALETRELPYSRVNPARARDFAKAIGLLAKTDAIDARLLARMGQSLPLSTQAPDDPA
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
RHVLARLHTRRDQLVAMRQQERTRLHETEGIERDSAESHMAWLDAEVARIEMACRDVLKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EKTLQEQEARLRSIPGIGPVAALTLIAHMPELGNRSAKAIAALAGLAPFNVDSGTSRGKR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHH
HIRGGRKRIRDALYMAALTASRMPRAFKSHADQMKEAGKPFKVVIIALARKLLAIANAII
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RDKTTFRRTT
HCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2403542 [H]