Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150395919
Identifier: 150395919
GI number: 150395919
Start: 748540
End: 751320
Strand: Direct
Name: 150395919
Synonym: Smed_0695
Alternate gene names: NA
Gene position: 748540-751320 (Clockwise)
Preceding gene: 150395917
Following gene: 150395920
Centisome position: 19.79
GC content: 65.66
Gene sequence:
>2781_bases ATGCTCGAGTCCATAGCTCTTCTAGCCTTTGTGATGGCGCTCGCCGCCTTCCTTGGCGGCCGCAAGACGGCCGAGCGGCT CGATCGGGAAATCGCGAGCCTCAAGGCGGAGATCGCGCAATTGGCGAAAGAAGGGGCGGGAGGGACGACCCCGGACCTCG CAGCCGCCAAGCCTACAGAGACTGGCTTTCCCACCGCCGCTGAGACGGACGCGGCGGCCCATGGTCCCTGGTCCGGGGCG CGGGAAGACGCGCGGATTGCTGCCGGCGAATCGGCGGCGGAGGTCGAAAGCGAAGCCACCGCCGCGCCGGTAGCGCCCCC CGAAGCGGCCGCGTGGGCCGAAAGCCTCGAGAGTCGGATTGGCGGCCGGTGGCCGGTCTGGGTTGGCGGGCTGGCCCTGG CGCTGGGTGGCTATTTCCTCGTGCAGTATTCGATCGAAGCCGGGCTCTTGAGTCCGGCGGTCCGCCTGGTGCTTGCCGCA GTTTTCGGGCTTGCTCTCGGAATTGCCGGCGAGGTGATCCGGCGCGGGGCCGAGCCTGCGATCGAAGACCGGTTTCGCAA CGCGATGATTCCCGGTGTGCTGACCGCCGCCGGAGCCGTGACGCTCTTCGGTGTCGTCTACGCGGCCCATGGCGTTTACG GCTTCATCGGAACTGGCATCGCCTTCGTCCTGCTGGCGCTGATTTCGCTTGCGACCGTGGGGCTTTCACTGCTGCACGGG CAGGCGCTCGCCGGTCTCGGCCTCCTGGCCTCGCTCCTGACACCGCTCTTCGTATCGAGCGGAGAGCCGCGCCCCTGGGT GTTGTTCGGGTTCCTCGCGGTGGCCTGGCTTGCCACGCTTGCCGCGTCGCGCCTGCGTAGATGGAGAGCCGTGCCGACGC TTGCCAATGCCGGCCTGGGGCTTTGGGGACTTGCCTATGTAGCGCTCGCCACGCCATTCGAGGCGCCTCCGGTCACCTTC GCGCTACTGGTGATGGTCGCGGGTGTCGCGCTGATCTGGCCCGGCCGGGCGGAGCCGAGCGCGGAGGCGAGCCGGGCACC GCCAATCGGTGCCGCCACTGAGCCCGGCGCGTGGGAAAGGCTCTTCACGCCGCCTCATCTTGCCGTAAGCATATCGGCGG CGATCGTCGCGACGGTTCTGTCCCTTTTGTTCATCAGCCCGGCGGTCGATGCCGCGCATTTCCCGGTAAGCGAGTTCATG GTGATCGTCGTCGCCCTCGCGGCGGCAGGCTCATTGAGGCCCTCGGCGGCCTATGCGGCACTGCTTGCCGCCATCGGCGC CGTCGTCGGCACCTGGAGTTTGACCGCGCTCAGCGGTGTTCTTGGATATTTTGATCCCTCATTCGCCGATTCATCCCCTG CGATTGTCGTCCCCGGCCGCACAGCCATGCTGACGGCCATGACCCTTTCCGGCGCCTTCGTCCTCTTCGCGGTCTTCGTC CTTCAGCGCCGCCCGGCAGACAACCGGCAATTTGCGGCGCTGTGGGCGGGCATCGCCGCCGTGGTGCCGAATGCGCTTCT GGCCATGTCGTTCGTGATGACTGGCAATTTCGCCTTCGACCTGCCCCATGGCCTTGCCGCGTTTGCGGGCGGCCTGTTCC TTCTCGGTCTCATCGAATGGCTCAATCGGCGGGACGCCGGCGAAGTGGCTGCCGATGTCGATCAGGGGCTGCTGGCACTC GGTTCCTTCGGTCTCTTCGTCATTGGGCTTCACGCCTGGACCGACGGCCTGGTGACCACCCTGGCGATCGCGCTTCTCGG GGCCGGATACAGCTTCGCCACACGTCTGCGCTCCTGGCCGATTCTCCCCTGGGTGACGGTGGCCGGCGCGGTTGTCATTC TTGCGCGCATTGCCTGGGAACCGACGATCGTCGGGCCGGGCACTCTCGCAACGACTCCGGTCTTCAACGCGCTGCTCCCG GGCTACGGCATTCCGGCACTGCTGCTCGTCGCCTCAGCCTATTTCCTGCGGGTGTGGCCGGACCTGCGCGTACGCAACCT GCTGCAGGCGCTCGCTAGCCTCTTCGTCCTGCTGACGCTAGCGATACTCGTGCGTCATGCAATGAACCACGGCGCGCTCG ACAGCTCCGTCCCGACACTCGGCGAACAGGCGATCTATACGCTTCTCGCCATCGGCGCTTCGGGGATATTCATGACGCTG GATGGAAGGTCCCCAAGTCCGGTGTTCCGCTATGGAGGCATGGCGCTCGGCGTCCTGTCCATGCTCTCCGTGCTTGCGGC GCACCTTGTCGGCCTGAACCCCTATTTCAGCGGAGAACTGCTCGGCAGCGTCCCCTTCTTCGATCTGCTTCTCATCGGCT ATCTGCTGCCCGCTATCGGCTACTCGGGTCTTGCCTGGTATGCACGCCGCAGGAGGCCGCTGCCCTATGTCGCGGCGCTC GCCGTCAGCGGCGCCGTGCTCGCCTTCGCCTGGGCTACCTTGAGCGTTCGCCGCTTCTGGCAGGGTCAGAACGTTGCCGA CTGGAAGAGTTTCCTGCAAGGCGAAACCTACACCTATTCGGTCGTCTGGCTCGTGCTCGGCGTGCTGCTGCTCGTGGCCG GCTCGCGTTTCGATGCAAAGAGTGTCCGGATTGCTTCGGCCGTTCTCGTCTTCGTTGCTGTACTCAAGGTCTTTTTGGTT GATATGTCCAATCTGGAAGGTTTCCTGCGGGCGTTGTCCTTTATCGGCCTCGGGGCCGTACTGATCGGCATCGGGCTCTT CTACCAGAAAATATTGTCGAGCAGCTCCGGCGACGCCGGTGAAGGGGCTCGCCGCGCATGA
Upstream 100 bases:
>100_bases TCTGTGAATCTGCAGTTCTCAGGCTCAGGATATTTTCAGCGGCCGTTTCGCGCTAACGTTGTCCGAATCGATCCTGACTA TGACCATCCCGGGGGAACTG
Downstream 100 bases:
>100_bases GCCGGATTCCCGCATTGGCGGCTGCCTTCGCTCCTCACGCCGAACTTGCCGGCGAACTCCTTCCGCATGCCTTTGCCGCC GAAGACGGCTCGCACGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 926; Mature: 926
Protein sequence:
>926_residues MLESIALLAFVMALAAFLGGRKTAERLDREIASLKAEIAQLAKEGAGGTTPDLAAAKPTETGFPTAAETDAAAHGPWSGA REDARIAAGESAAEVESEATAAPVAPPEAAAWAESLESRIGGRWPVWVGGLALALGGYFLVQYSIEAGLLSPAVRLVLAA VFGLALGIAGEVIRRGAEPAIEDRFRNAMIPGVLTAAGAVTLFGVVYAAHGVYGFIGTGIAFVLLALISLATVGLSLLHG QALAGLGLLASLLTPLFVSSGEPRPWVLFGFLAVAWLATLAASRLRRWRAVPTLANAGLGLWGLAYVALATPFEAPPVTF ALLVMVAGVALIWPGRAEPSAEASRAPPIGAATEPGAWERLFTPPHLAVSISAAIVATVLSLLFISPAVDAAHFPVSEFM VIVVALAAAGSLRPSAAYAALLAAIGAVVGTWSLTALSGVLGYFDPSFADSSPAIVVPGRTAMLTAMTLSGAFVLFAVFV LQRRPADNRQFAALWAGIAAVVPNALLAMSFVMTGNFAFDLPHGLAAFAGGLFLLGLIEWLNRRDAGEVAADVDQGLLAL GSFGLFVIGLHAWTDGLVTTLAIALLGAGYSFATRLRSWPILPWVTVAGAVVILARIAWEPTIVGPGTLATTPVFNALLP GYGIPALLLVASAYFLRVWPDLRVRNLLQALASLFVLLTLAILVRHAMNHGALDSSVPTLGEQAIYTLLAIGASGIFMTL DGRSPSPVFRYGGMALGVLSMLSVLAAHLVGLNPYFSGELLGSVPFFDLLLIGYLLPAIGYSGLAWYARRRRPLPYVAAL AVSGAVLAFAWATLSVRRFWQGQNVADWKSFLQGETYTYSVVWLVLGVLLLVAGSRFDAKSVRIASAVLVFVAVLKVFLV DMSNLEGFLRALSFIGLGAVLIGIGLFYQKILSSSSGDAGEGARRA
Sequences:
>Translated_926_residues MLESIALLAFVMALAAFLGGRKTAERLDREIASLKAEIAQLAKEGAGGTTPDLAAAKPTETGFPTAAETDAAAHGPWSGA REDARIAAGESAAEVESEATAAPVAPPEAAAWAESLESRIGGRWPVWVGGLALALGGYFLVQYSIEAGLLSPAVRLVLAA VFGLALGIAGEVIRRGAEPAIEDRFRNAMIPGVLTAAGAVTLFGVVYAAHGVYGFIGTGIAFVLLALISLATVGLSLLHG QALAGLGLLASLLTPLFVSSGEPRPWVLFGFLAVAWLATLAASRLRRWRAVPTLANAGLGLWGLAYVALATPFEAPPVTF ALLVMVAGVALIWPGRAEPSAEASRAPPIGAATEPGAWERLFTPPHLAVSISAAIVATVLSLLFISPAVDAAHFPVSEFM VIVVALAAAGSLRPSAAYAALLAAIGAVVGTWSLTALSGVLGYFDPSFADSSPAIVVPGRTAMLTAMTLSGAFVLFAVFV LQRRPADNRQFAALWAGIAAVVPNALLAMSFVMTGNFAFDLPHGLAAFAGGLFLLGLIEWLNRRDAGEVAADVDQGLLAL GSFGLFVIGLHAWTDGLVTTLAIALLGAGYSFATRLRSWPILPWVTVAGAVVILARIAWEPTIVGPGTLATTPVFNALLP GYGIPALLLVASAYFLRVWPDLRVRNLLQALASLFVLLTLAILVRHAMNHGALDSSVPTLGEQAIYTLLAIGASGIFMTL DGRSPSPVFRYGGMALGVLSMLSVLAAHLVGLNPYFSGELLGSVPFFDLLLIGYLLPAIGYSGLAWYARRRRPLPYVAAL AVSGAVLAFAWATLSVRRFWQGQNVADWKSFLQGETYTYSVVWLVLGVLLLVAGSRFDAKSVRIASAVLVFVAVLKVFLV DMSNLEGFLRALSFIGLGAVLIGIGLFYQKILSSSSGDAGEGARRA >Mature_926_residues MLESIALLAFVMALAAFLGGRKTAERLDREIASLKAEIAQLAKEGAGGTTPDLAAAKPTETGFPTAAETDAAAHGPWSGA REDARIAAGESAAEVESEATAAPVAPPEAAAWAESLESRIGGRWPVWVGGLALALGGYFLVQYSIEAGLLSPAVRLVLAA VFGLALGIAGEVIRRGAEPAIEDRFRNAMIPGVLTAAGAVTLFGVVYAAHGVYGFIGTGIAFVLLALISLATVGLSLLHG QALAGLGLLASLLTPLFVSSGEPRPWVLFGFLAVAWLATLAASRLRRWRAVPTLANAGLGLWGLAYVALATPFEAPPVTF ALLVMVAGVALIWPGRAEPSAEASRAPPIGAATEPGAWERLFTPPHLAVSISAAIVATVLSLLFISPAVDAAHFPVSEFM VIVVALAAAGSLRPSAAYAALLAAIGAVVGTWSLTALSGVLGYFDPSFADSSPAIVVPGRTAMLTAMTLSGAFVLFAVFV LQRRPADNRQFAALWAGIAAVVPNALLAMSFVMTGNFAFDLPHGLAAFAGGLFLLGLIEWLNRRDAGEVAADVDQGLLAL GSFGLFVIGLHAWTDGLVTTLAIALLGAGYSFATRLRSWPILPWVTVAGAVVILARIAWEPTIVGPGTLATTPVFNALLP GYGIPALLLVASAYFLRVWPDLRVRNLLQALASLFVLLTLAILVRHAMNHGALDSSVPTLGEQAIYTLLAIGASGIFMTL DGRSPSPVFRYGGMALGVLSMLSVLAAHLVGLNPYFSGELLGSVPFFDLLLIGYLLPAIGYSGLAWYARRRRPLPYVAAL AVSGAVLAFAWATLSVRRFWQGQNVADWKSFLQGETYTYSVVWLVLGVLLLVAGSRFDAKSVRIASAVLVFVAVLKVFLV DMSNLEGFLRALSFIGLGAVLIGIGLFYQKILSSSSGDAGEGARRA
Specific function: Unknown
COG id: COG5373
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96418; Mature: 96418
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESIALLAFVMALAAFLGGRKTAERLDREIASLKAEIAQLAKEGAGGTTPDLAAAKPTE CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TGFPTAAETDAAAHGPWSGAREDARIAAGESAAEVESEATAAPVAPPEAAAWAESLESRI CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH GGRWPVWVGGLALALGGYFLVQYSIEAGLLSPAVRLVLAAVFGLALGIAGEVIRRGAEPA CCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH IEDRFRNAMIPGVLTAAGAVTLFGVVYAAHGVYGFIGTGIAFVLLALISLATVGLSLLHG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALAGLGLLASLLTPLFVSSGEPRPWVLFGFLAVAWLATLAASRLRRWRAVPTLANAGLG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH LWGLAYVALATPFEAPPVTFALLVMVAGVALIWPGRAEPSAEASRAPPIGAATEPGAWER HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LFTPPHLAVSISAAIVATVLSLLFISPAVDAAHFPVSEFMVIVVALAAAGSLRPSAAYAA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH LLAAIGAVVGTWSLTALSGVLGYFDPSFADSSPAIVVPGRTAMLTAMTLSGAFVLFAVFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH LQRRPADNRQFAALWAGIAAVVPNALLAMSFVMTGNFAFDLPHGLAAFAGGLFLLGLIEW HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHH LNRRDAGEVAADVDQGLLALGSFGLFVIGLHAWTDGLVTTLAIALLGAGYSFATRLRSWP HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC ILPWVTVAGAVVILARIAWEPTIVGPGTLATTPVFNALLPGYGIPALLLVASAYFLRVWP CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC DLRVRNLLQALASLFVLLTLAILVRHAMNHGALDSSVPTLGEQAIYTLLAIGASGIFMTL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE DGRSPSPVFRYGGMALGVLSMLSVLAAHLVGLNPYFSGELLGSVPFFDLLLIGYLLPAIG CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHC YSGLAWYARRRRPLPYVAALAVSGAVLAFAWATLSVRRFWQGQNVADWKSFLQGETYTYS CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH VVWLVLGVLLLVAGSRFDAKSVRIASAVLVFVAVLKVFLVDMSNLEGFLRALSFIGLGAV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGIGLFYQKILSSSSGDAGEGARRA HHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLESIALLAFVMALAAFLGGRKTAERLDREIASLKAEIAQLAKEGAGGTTPDLAAAKPTE CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TGFPTAAETDAAAHGPWSGAREDARIAAGESAAEVESEATAAPVAPPEAAAWAESLESRI CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH GGRWPVWVGGLALALGGYFLVQYSIEAGLLSPAVRLVLAAVFGLALGIAGEVIRRGAEPA CCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH IEDRFRNAMIPGVLTAAGAVTLFGVVYAAHGVYGFIGTGIAFVLLALISLATVGLSLLHG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALAGLGLLASLLTPLFVSSGEPRPWVLFGFLAVAWLATLAASRLRRWRAVPTLANAGLG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH LWGLAYVALATPFEAPPVTFALLVMVAGVALIWPGRAEPSAEASRAPPIGAATEPGAWER HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LFTPPHLAVSISAAIVATVLSLLFISPAVDAAHFPVSEFMVIVVALAAAGSLRPSAAYAA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH LLAAIGAVVGTWSLTALSGVLGYFDPSFADSSPAIVVPGRTAMLTAMTLSGAFVLFAVFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH LQRRPADNRQFAALWAGIAAVVPNALLAMSFVMTGNFAFDLPHGLAAFAGGLFLLGLIEW HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHH LNRRDAGEVAADVDQGLLALGSFGLFVIGLHAWTDGLVTTLAIALLGAGYSFATRLRSWP HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC ILPWVTVAGAVVILARIAWEPTIVGPGTLATTPVFNALLPGYGIPALLLVASAYFLRVWP CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC DLRVRNLLQALASLFVLLTLAILVRHAMNHGALDSSVPTLGEQAIYTLLAIGASGIFMTL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE DGRSPSPVFRYGGMALGVLSMLSVLAAHLVGLNPYFSGELLGSVPFFDLLLIGYLLPAIG CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHC YSGLAWYARRRRPLPYVAALAVSGAVLAFAWATLSVRRFWQGQNVADWKSFLQGETYTYS CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH VVWLVLGVLLLVAGSRFDAKSVRIASAVLVFVAVLKVFLVDMSNLEGFLRALSFIGLGAV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGIGLFYQKILSSSSGDAGEGARRA HHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA