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The map label for this gene is ydiS [C]

Identifier: 150395873

GI number: 150395873

Start: 700717

End: 702381

Strand: Direct

Name: ydiS [C]

Synonym: Smed_0649

Alternate gene names: 150395873

Gene position: 700717-702381 (Clockwise)

Preceding gene: 150395867

Following gene: 150395874

Centisome position: 18.53

GC content: 62.88

Gene sequence:

>1665_bases
ATGACCGAGCAACAAGAACTCCCCGAACGCGAGAGCATGGAATTCGACGTGGTGATCGTCGGGGCGGGGCCGGCGGGGCT
TGCCGCGGCGATTCGCCTGAAGCAGGTCAATCCGGAGCTTTCGGTCGTGGTGCTGGAAAAGGGCGCCGAAGTCGGCGCGC
ATATCCTCTCGGGCGCCGTCGTCGACCCTATCGGTATCGACCGGCTGCTGCCCGGTTGGCGCGACGAACCGGATCATCCG
TTCAAAACCGAAGTGACCGATGACCATTTCCTCTTTCTGGGGCCTGCCGGCTCGGTGCGCCTGCCGAACATGCTGATGCC
GCCGCTGATGAACAATCACGGCAACTACATCGTCTCGCTCGGCAATGTCTGTCGCTGGCTCGCCGCCCAGGCGGAAGGCC
TCGGCGTCGAAATCTATCCGGGCTTTGCCGCGACCGAAGTGCTCTACAATGACGAGGGCGCGGTCATCGGCGTCGCCACC
GGCGACATGGGGATCGAGCAAAACGGCGAGCCGGGGCCGAATTTCGCCCGCGGCATGGAACTGCTCGGCAAGTACACCCT
CATCGGCGAGGGCGTGCGCGGCTCGCTCGCTAAGCAGCTGATCGCCAGATACAAGCTCGACGAGGGCCGTGACGTGCCGA
AGTTCGGCATCGGGCTGAAGGAGCTCTGGGAGGTCAAGCCAGAAAACCACAAGCCCGGCCTCGTGCAGCATTCCTTCGGC
TGGCCGCTCGGAATGAAGACCGGTGGCGGTTCCTTCCTCTATCACCTGGAGGACAACCTCGTCGCTGTCGGCTTCGTGGT
GCATCTGAACTACAAGAATCCCTATCTTTTTCCATTCGAGGAGTTTCAGCGCTTCAAGACCCATCCGGCGATCCGCGGCA
CTTTCGAGGGTGGAAAAAGGCTCTCCTATGGCGCCCGCGCCATCACCGAGGGCGGCTACCAGGCGGTGCCCAAACTCTCC
TTCCCCGGTGGGGCGCTGATCGGCTGCTCGGCGGGTTTCGTCAACGTGCCGCGCATCAAGGGCAGCCACAATGCCGTGTT
GTCGGGGATTCTCGCGGCGGAAAAGCTGGCTGCGGCGATCGCCGAAGGCCGCGCAAATGATGAGCCGATCGAGATCGAGC
GCGGCTGGCGCGAGAGTGCAATCGGCCAGGACCTGAAAAGGGTGAGGAACGTCAAGCCGCTGTGGTCGCGCTTCGGCACC
GCCGTCGGCGTGGCCCTGGGCGGTCTCGACATGTGGACGAACCAGCTCTTCGGCTTTTCCTTTTTCGGGACGCTGAAGCA
CGGCAAGACCGACGCCCAATCGCTGGAGCCGGCCTCGAAGCACCAGAAGATCGATTACCCGAAGCCGGACGGGGTGCTGA
CCTTCGACCGGCTCTCCTCGGTGTTCCTGTCGAACACCAATCACGAGGAGGACCAGCCGGTGCATCTTCAGGTGAAGGAC
TGGGACCTGCAGAAGCGCTCGGAATACGAGGTCTATGCCGGCCCATCGTCGCGTTACTGTCCGGCCGGCGTTTACGAATG
GGTGGAAAAGGACGGCCAGCCGACCTTCGTCATCAACGCCCAGAACTGCGTCCACTGCAAGACCTGCGACATCAAGGACC
CGAACCAGAACATCAACTGGGTGCCGCCACAAGGGGGCGAAGGCCCGGTCTATCCGAACATGTAA

Upstream 100 bases:

>100_bases
TCTGTCGCATCCCGGCTCGACAAGGTTTGCTGCATTTGTCATGACGGATTGATTTGGCCGGGAACGGAGCCGGCGCAAGA
CCGGCAAACTGGAGAGCGTG

Downstream 100 bases:

>100_bases
TGTTCGGGGGGCGGGCCGCACCGGAAAGATGGCGTTTGGACATGCGAAGAGCCCGGAAGCGATTCCGAGCTCTCTTTTTT
GCCGTCCAGGCTCCGACGCG

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MTEQQELPERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGAEVGAHILSGAVVDPIGIDRLLPGWRDEPDHP
FKTEVTDDHFLFLGPAGSVRLPNMLMPPLMNNHGNYIVSLGNVCRWLAAQAEGLGVEIYPGFAATEVLYNDEGAVIGVAT
GDMGIEQNGEPGPNFARGMELLGKYTLIGEGVRGSLAKQLIARYKLDEGRDVPKFGIGLKELWEVKPENHKPGLVQHSFG
WPLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLFPFEEFQRFKTHPAIRGTFEGGKRLSYGARAITEGGYQAVPKLS
FPGGALIGCSAGFVNVPRIKGSHNAVLSGILAAEKLAAAIAEGRANDEPIEIERGWRESAIGQDLKRVRNVKPLWSRFGT
AVGVALGGLDMWTNQLFGFSFFGTLKHGKTDAQSLEPASKHQKIDYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKD
WDLQKRSEYEVYAGPSSRYCPAGVYEWVEKDGQPTFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYPNM

Sequences:

>Translated_554_residues
MTEQQELPERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGAEVGAHILSGAVVDPIGIDRLLPGWRDEPDHP
FKTEVTDDHFLFLGPAGSVRLPNMLMPPLMNNHGNYIVSLGNVCRWLAAQAEGLGVEIYPGFAATEVLYNDEGAVIGVAT
GDMGIEQNGEPGPNFARGMELLGKYTLIGEGVRGSLAKQLIARYKLDEGRDVPKFGIGLKELWEVKPENHKPGLVQHSFG
WPLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLFPFEEFQRFKTHPAIRGTFEGGKRLSYGARAITEGGYQAVPKLS
FPGGALIGCSAGFVNVPRIKGSHNAVLSGILAAEKLAAAIAEGRANDEPIEIERGWRESAIGQDLKRVRNVKPLWSRFGT
AVGVALGGLDMWTNQLFGFSFFGTLKHGKTDAQSLEPASKHQKIDYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKD
WDLQKRSEYEVYAGPSSRYCPAGVYEWVEKDGQPTFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYPNM
>Mature_553_residues
TEQQELPERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGAEVGAHILSGAVVDPIGIDRLLPGWRDEPDHPF
KTEVTDDHFLFLGPAGSVRLPNMLMPPLMNNHGNYIVSLGNVCRWLAAQAEGLGVEIYPGFAATEVLYNDEGAVIGVATG
DMGIEQNGEPGPNFARGMELLGKYTLIGEGVRGSLAKQLIARYKLDEGRDVPKFGIGLKELWEVKPENHKPGLVQHSFGW
PLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLFPFEEFQRFKTHPAIRGTFEGGKRLSYGARAITEGGYQAVPKLSF
PGGALIGCSAGFVNVPRIKGSHNAVLSGILAAEKLAAAIAEGRANDEPIEIERGWRESAIGQDLKRVRNVKPLWSRFGTA
VGVALGGLDMWTNQLFGFSFFGTLKHGKTDAQSLEPASKHQKIDYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKDW
DLQKRSEYEVYAGPSSRYCPAGVYEWVEKDGQPTFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=561, Percent_Identity=51.3368983957219, Blast_Score=540, Evalue=1e-153,
Organism=Escherichia coli, GI1787991, Length=332, Percent_Identity=27.4096385542169, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1786227, Length=334, Percent_Identity=27.2455089820359, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87082155, Length=383, Percent_Identity=25.3263707571802, Blast_Score=75, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI25144720, Length=564, Percent_Identity=49.645390070922, Blast_Score=535, Evalue=1e-152,
Organism=Saccharomyces cerevisiae, GI6324932, Length=585, Percent_Identity=44.4444444444444, Blast_Score=468, Evalue=1e-132,
Organism=Drosophila melanogaster, GI24652256, Length=564, Percent_Identity=54.7872340425532, Blast_Score=577, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60567; Mature: 60435

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQQELPERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGAEVGAHILSGAV
CCCCHHCCCCCCCEEEEEEECCCCHHHHHEEEEEECCCCEEEEEEECCCHHHHHHHCCCE
VDPIGIDRLLPGWRDEPDHPFKTEVTDDHFLFLGPAGSVRLPNMLMPPLMNNHGNYIVSL
ECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCHHCCCCCEEEEH
GNVCRWLAAQAEGLGVEIYPGFAATEVLYNDEGAVIGVATGDMGIEQNGEPGPNFARGME
HHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LLGKYTLIGEGVRGSLAKQLIARYKLDEGRDVPKFGIGLKELWEVKPENHKPGLVQHSFG
HHHCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHCCCCCCCCCCEEEECCC
WPLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLFPFEEFQRFKTHPAIRGTFEGGKR
CCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCEECCHHHHHHHHCCCCEEEECCCCCE
LSYGARAITEGGYQAVPKLSFPGGALIGCSAGFVNVPRIKGSHNAVLSGILAAEKLAAAI
EECCCHHHCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH
AEGRANDEPIEIERGWRESAIGQDLKRVRNVKPLWSRFGTAVGVALGGLDMWTNQLFGFS
HHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEE
FFGTLKHGKTDAQSLEPASKHQKIDYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKD
EEEECCCCCCCHHHCCCCHHCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEEC
WDLQKRSEYEVYAGPSSRYCPAGVYEWVEKDGQPTFVINAQNCVHCKTCDIKDPNQNINW
CCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCCE
VPPQGGEGPVYPNM
ECCCCCCCCCCCCC
>Mature Secondary Structure 
TEQQELPERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGAEVGAHILSGAV
CCCHHCCCCCCCEEEEEEECCCCHHHHHEEEEEECCCCEEEEEEECCCHHHHHHHCCCE
VDPIGIDRLLPGWRDEPDHPFKTEVTDDHFLFLGPAGSVRLPNMLMPPLMNNHGNYIVSL
ECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCHHCCCCCEEEEH
GNVCRWLAAQAEGLGVEIYPGFAATEVLYNDEGAVIGVATGDMGIEQNGEPGPNFARGME
HHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LLGKYTLIGEGVRGSLAKQLIARYKLDEGRDVPKFGIGLKELWEVKPENHKPGLVQHSFG
HHHCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHCCCCCCCCCCEEEECCC
WPLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLFPFEEFQRFKTHPAIRGTFEGGKR
CCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCEECCHHHHHHHHCCCCEEEECCCCCE
LSYGARAITEGGYQAVPKLSFPGGALIGCSAGFVNVPRIKGSHNAVLSGILAAEKLAAAI
EECCCHHHCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH
AEGRANDEPIEIERGWRESAIGQDLKRVRNVKPLWSRFGTAVGVALGGLDMWTNQLFGFS
HHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEE
FFGTLKHGKTDAQSLEPASKHQKIDYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKD
EEEECCCCCCCHHHCCCCHHCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEEC
WDLQKRSEYEVYAGPSSRYCPAGVYEWVEKDGQPTFVINAQNCVHCKTCDIKDPNQNINW
CCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCCE
VPPQGGEGPVYPNM
ECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]