Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is sam [H]
Identifier: 150395867
GI number: 150395867
Start: 695208
End: 696146
Strand: Direct
Name: sam [H]
Synonym: Smed_0643
Alternate gene names: 150395867
Gene position: 695208-696146 (Clockwise)
Preceding gene: 150395864
Following gene: 150395873
Centisome position: 18.38
GC content: 61.24
Gene sequence:
>939_bases ATGGATGCGGACGCTCCGAGCCCGATGAAGGGGATGGTGCTCAAGGTGCTCTCCGTTGTCGTCTTCGTGTGCATGTCAAC CTCTATCAAGGCTGCCGGCAACGATATCGCCACGGGTCAGATCACCTTCTATCGCTCGGCATTCGCGATGGTGCCGATCC TCGGCTTCCTGGCCTGCCGAGGCGCGCTGCGCGACGCTTTCCGGACCAGCAACGTCACGGGACATGTGGCGCGTGGCTTC GTCGGCATCCTCGCCATGAGTTGCGGCTTTTACGGTCTCGTCCATCTGCCCCTGCCGGAGGCGATCGCGATCGGCTACGC TATGCCGCTTCTCGCGGTGGCTTTCGCGGCGATCTTTCTTGGAGAGATCGTGCGGCTCTATCGCTGGTCGGCCGTGCTTA TCGGGCTCATCGGGGTGTTTATCATCATCTGGCCACGGCTTACGCTTTTCAACCAGGGCGGCTTCGGGTCGGCGGAGGCT ATGGGTGCCGTCGCGGTGCTTTTTTCGGCGGCGCTCGGAGCAACGGCGATGGTGCTCGTGCGCAAGCTCGTACAGAAGGA ACGCACCCATACGATCGTCCTCTATTTCTCGCTTTCCGCTGCAATGTTCTCGCTTGCGACGCTGCCCTTCGGCTGGTCTG AACTCTCATGGGAGGCATTCTTCCTCCTGATGATCGCCGGGTTTTGCGGCGGCATCGGGCAGATCCTGCTGACGGAGAGT TATCGCCACGCCGATATGTCGACGATCGCCCCCTTCGAATACACATCCATCGTGCTGGGCATCGTCATCGGTTATTTTCT TTTCGGAGATGTGCCGACGGCAACCATGCTCGCGGGAACGGCGATCGTCGTCGGCGCGGGCATCTTCATCATCTACCGGG AGCACCAGCTGGGACTGGAGCGCAGGGGTGCCAGGAAGCACGTTACCCCGCAGGGTTGA
Upstream 100 bases:
>100_bases AAGGTGGCGTCGTCCTTTCGCGGCTCTCCTGTCGCATTTTCCCCCAACGTCTGTCGGCCTTCCAGCCGGTTCGCCGATGT AAGATTGAAAAGTACTTTCC
Downstream 100 bases:
>100_bases AACACTTCCAGGCAGGGGCTCTACCGGGCACCTTCCTCCCAGGCAGGAACGGTATCGTCCTCGATGAGATCGCCCGCGTC CTGCTGTGAGACCGGACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MDADAPSPMKGMVLKVLSVVVFVCMSTSIKAAGNDIATGQITFYRSAFAMVPILGFLACRGALRDAFRTSNVTGHVARGF VGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFLGEIVRLYRWSAVLIGLIGVFIIIWPRLTLFNQGGFGSAEA MGAVAVLFSAALGATAMVLVRKLVQKERTHTIVLYFSLSAAMFSLATLPFGWSELSWEAFFLLMIAGFCGGIGQILLTES YRHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHQLGLERRGARKHVTPQG
Sequences:
>Translated_312_residues MDADAPSPMKGMVLKVLSVVVFVCMSTSIKAAGNDIATGQITFYRSAFAMVPILGFLACRGALRDAFRTSNVTGHVARGF VGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFLGEIVRLYRWSAVLIGLIGVFIIIWPRLTLFNQGGFGSAEA MGAVAVLFSAALGATAMVLVRKLVQKERTHTIVLYFSLSAAMFSLATLPFGWSELSWEAFFLLMIAGFCGGIGQILLTES YRHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHQLGLERRGARKHVTPQG >Mature_312_residues MDADAPSPMKGMVLKVLSVVVFVCMSTSIKAAGNDIATGQITFYRSAFAMVPILGFLACRGALRDAFRTSNVTGHVARGF VGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFLGEIVRLYRWSAVLIGLIGVFIIIWPRLTLFNQGGFGSAEA MGAVAVLFSAALGATAMVLVRKLVQKERTHTIVLYFSLSAAMFSLATLPFGWSELSWEAFFLLMIAGFCGGIGQILLTES YRHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHQLGLERRGARKHVTPQG
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
Organism=Drosophila melanogaster, GI24645940, Length=315, Percent_Identity=24.7619047619048, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33422; Mature: 33422
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDADAPSPMKGMVLKVLSVVVFVCMSTSIKAAGNDIATGQITFYRSAFAMVPILGFLACR CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH GALRDAFRTSNVTGHVARGFVGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH GEIVRLYRWSAVLIGLIGVFIIIWPRLTLFNQGGFGSAEAMGAVAVLFSAALGATAMVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RKLVQKERTHTIVLYFSLSAAMFSLATLPFGWSELSWEAFFLLMIAGFCGGIGQILLTES HHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC YRHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHQLGLE CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECHHHCHH RRGARKHVTPQG HCCCCCCCCCCC >Mature Secondary Structure MDADAPSPMKGMVLKVLSVVVFVCMSTSIKAAGNDIATGQITFYRSAFAMVPILGFLACR CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH GALRDAFRTSNVTGHVARGFVGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH GEIVRLYRWSAVLIGLIGVFIIIWPRLTLFNQGGFGSAEAMGAVAVLFSAALGATAMVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RKLVQKERTHTIVLYFSLSAAMFSLATLPFGWSELSWEAFFLLMIAGFCGGIGQILLTES HHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC YRHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHQLGLE CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECHHHCHH RRGARKHVTPQG HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA