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The map label for this gene is phaF2 [H]

Identifier: 150395836

GI number: 150395836

Start: 661023

End: 661409

Strand: Direct

Name: phaF2 [H]

Synonym: Smed_0612

Alternate gene names: 150395836

Gene position: 661023-661409 (Clockwise)

Preceding gene: 150395835

Following gene: 150395837

Centisome position: 17.48

GC content: 66.67

Gene sequence:

>387_bases
ATGACGCCCGCTGCAGTTCTGAGCACGGCTTCGGGCCTGGCGCTCGTGCTCCTCTCTCTGGCGCTGCTGATGACGGTGCT
GCGCATTGTTCGCGGGCCAACACTTCCGGACCGGGTGCTCGGGCTCGATATGCTGGTTGCGATCGCCATCGGCTTGATCG
CGGTAATCGCCGTCAGGACCGGATTCTATCTCTACATCGACATAGCAATCGCCCTCGGGCTTGTCGGTTTCCTCGCGACC
GTCGCTTTCGCCCGCTTCATCCTGACGCGGGGTCTCGCACCGGAACGCATGTCGCCGGGTGCAACGGACGTTTCCCGCCC
GAACCCGTCCCCGGCGCGCCCGCGCCCGGGACAGGCCGGGCGCCGTAAACGCAAGGGGGCACGCTGA

Upstream 100 bases:

>100_bases
AGACCCTCTATGTACATGCGCTCGATTGCGCCGATCCGGCAGCCTTGCGGCGAGACATTGCCGGCGGCTTCGAGCGCCGA
ATCCGGGAGGCCTTCGAACG

Downstream 100 bases:

>100_bases
TGGCCCTGCAGATCACTGCCTACATCGTTGCGCTCGTGATGGTCGTCGGTGCATCCTTTTCGCTGCTCGCGGCCCTCGGC
CTCCTCCGGTTTCCCGACCT

Product: putative monovalent cation/H+ antiporter subunit F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTPAAVLSTASGLALVLLSLALLMTVLRIVRGPTLPDRVLGLDMLVAIAIGLIAVIAVRTGFYLYIDIAIALGLVGFLAT
VAFARFILTRGLAPERMSPGATDVSRPNPSPARPRPGQAGRRKRKGAR

Sequences:

>Translated_128_residues
MTPAAVLSTASGLALVLLSLALLMTVLRIVRGPTLPDRVLGLDMLVAIAIGLIAVIAVRTGFYLYIDIAIALGLVGFLAT
VAFARFILTRGLAPERMSPGATDVSRPNPSPARPRPGQAGRRKRKGAR
>Mature_127_residues
TPAAVLSTASGLALVLLSLALLMTVLRIVRGPTLPDRVLGLDMLVAIAIGLIAVIAVRTGFYLYIDIAIALGLVGFLATV
AFARFILTRGLAPERMSPGATDVSRPNPSPARPRPGQAGRRKRKGAR

Specific function: Unknown

COG id: COG2212

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhF subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007208 [H]

Pfam domain/function: PF04066 MrpF_PhaF [H]

EC number: NA

Molecular weight: Translated: 13442; Mature: 13311

Theoretical pI: Translated: 12.38; Mature: 12.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAAVLSTASGLALVLLSLALLMTVLRIVRGPTLPDRVLGLDMLVAIAIGLIAVIAVRT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GFYLYIDIAIALGLVGFLATVAFARFILTRGLAPERMSPGATDVSRPNPSPARPRPGQAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
RRKRKGAR
HHHCCCCC
>Mature Secondary Structure 
TPAAVLSTASGLALVLLSLALLMTVLRIVRGPTLPDRVLGLDMLVAIAIGLIAVIAVRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GFYLYIDIAIALGLVGFLATVAFARFILTRGLAPERMSPGATDVSRPNPSPARPRPGQAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
RRKRKGAR
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7756693; 11481430 [H]