| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is ilvE [H]
Identifier: 150395809
GI number: 150395809
Start: 634388
End: 635269
Strand: Direct
Name: ilvE [H]
Synonym: Smed_0585
Alternate gene names: 150395809
Gene position: 634388-635269 (Clockwise)
Preceding gene: 150395803
Following gene: 150395811
Centisome position: 16.77
GC content: 63.27
Gene sequence:
>882_bases ATGGCCGTCGATACATCCCCCCGATCCACCACCTGGACCTATGTCGACGGCGAATGGCTTGCCGGCAACCCGCCGCTGAT CGGCCCGACATCCCATGCGATGTGGCTCGGTTCGACGGTATTCGATGGCGCGCGCTGGTTCGATGGCATCGCGCCGGATC TGGATCTCCATTGCCGGCGCGTCAACCGATCCGCCGAAGCCTTGGGTCTAAGGCCGACGATGACCGCCCAGGCGATCGAG GCACTCGCCTGGGAAGGCGTGAAGAAGTTCGACGGGCAGACGGCCATCTACGTGAAGCCGATGTATTGGGGCGAGCACGG CTCCTGGAGCGTCGTTGCGGTGGACCCTGAATCCACACGCTTCGCGCTTTGCCTGTTCGAGGCGCCAATGGGCAACGGCC ATGCCGGCTCGTCACTGACGCTGTCGCCTTTCCGGCGACCAACGGTCGAATGCATGCCGACGGACGCCAAGGCCGGCTGC CTTTATCCGAACAATGCCCGTATCCTCAATGAGGCTCGCTCGCGCGGTTTCGACAATGCTCTGGTGCGCGATATGCTCGG CAACATCGCCGAGACCGGCTCCTCCAATATCTTCATGGTGAGGGACGGCGTCGTCTTCACGCCGGCCGCCAACAAGACCT TTCTCGCCGGTATCACCCGCTCGCGCGTGATGGACCTTCTGCGCGAGGCAGGTCTCCAAGTGATCGAGACCGACTTGACC ATGGCCGATTTCGAGGCGGCCGACGAGATCTTCACCTCGGGCAACTATTCCAAAGTGCTGCCCGTCACCCGTATCGAGCA GCGCGAGCTGCAGGCCGGCCCGGTGACGGGCAAGGCGCGAGATCTTTATATGGACTGGGCGCACACAACCGGACGCCGAT AG
Upstream 100 bases:
>100_bases GGCTCCAGATTGGACGCCATGACATTTTTTGATGTACGCATTCACCCTCATGCTGTTCTTTCCGGCTAGAGCGGAAGTGT TCAATGAGAAGGAGACGCCG
Downstream 100 bases:
>100_bases TCTCGCTTGTTCTCTATCGTTACGGCTCGAAGGGACGCACGACGACGTCGGGCGACGAGCGCGTGTTCGGACCATGATAG ACCGCTTCGACATTGTTCCC
Product: aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MAVDTSPRSTTWTYVDGEWLAGNPPLIGPTSHAMWLGSTVFDGARWFDGIAPDLDLHCRRVNRSAEALGLRPTMTAQAIE ALAWEGVKKFDGQTAIYVKPMYWGEHGSWSVVAVDPESTRFALCLFEAPMGNGHAGSSLTLSPFRRPTVECMPTDAKAGC LYPNNARILNEARSRGFDNALVRDMLGNIAETGSSNIFMVRDGVVFTPAANKTFLAGITRSRVMDLLREAGLQVIETDLT MADFEAADEIFTSGNYSKVLPVTRIEQRELQAGPVTGKARDLYMDWAHTTGRR
Sequences:
>Translated_293_residues MAVDTSPRSTTWTYVDGEWLAGNPPLIGPTSHAMWLGSTVFDGARWFDGIAPDLDLHCRRVNRSAEALGLRPTMTAQAIE ALAWEGVKKFDGQTAIYVKPMYWGEHGSWSVVAVDPESTRFALCLFEAPMGNGHAGSSLTLSPFRRPTVECMPTDAKAGC LYPNNARILNEARSRGFDNALVRDMLGNIAETGSSNIFMVRDGVVFTPAANKTFLAGITRSRVMDLLREAGLQVIETDLT MADFEAADEIFTSGNYSKVLPVTRIEQRELQAGPVTGKARDLYMDWAHTTGRR >Mature_292_residues AVDTSPRSTTWTYVDGEWLAGNPPLIGPTSHAMWLGSTVFDGARWFDGIAPDLDLHCRRVNRSAEALGLRPTMTAQAIEA LAWEGVKKFDGQTAIYVKPMYWGEHGSWSVVAVDPESTRFALCLFEAPMGNGHAGSSLTLSPFRRPTVECMPTDAKAGCL YPNNARILNEARSRGFDNALVRDMLGNIAETGSSNIFMVRDGVVFTPAANKTFLAGITRSRVMDLLREAGLQVIETDLTM ADFEAADEIFTSGNYSKVLPVTRIEQRELQAGPVTGKARDLYMDWAHTTGRR
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI48994963, Length=291, Percent_Identity=28.5223367697594, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 32167; Mature: 32036
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDTSPRSTTWTYVDGEWLAGNPPLIGPTSHAMWLGSTVFDGARWFDGIAPDLDLHCRR CCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCEEECCHHHCCHHHHCCCCCCHHHHHHH VNRSAEALGLRPTMTAQAIEALAWEGVKKFDGQTAIYVKPMYWGEHGSWSVVAVDPESTR HCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEECCCCCE FALCLFEAPMGNGHAGSSLTLSPFRRPTVECMPTDAKAGCLYPNNARILNEARSRGFDNA EEEEEEECCCCCCCCCCCEEECCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHCCCCHH LVRDMLGNIAETGSSNIFMVRDGVVFTPAANKTFLAGITRSRVMDLLREAGLQVIETDLT HHHHHHHHHHHCCCCCEEEEECCEEECCCCCCEEEEHHHHHHHHHHHHHCCCEEEECCCC MADFEAADEIFTSGNYSKVLPVTRIEQRELQAGPVTGKARDLYMDWAHTTGRR HHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCCCCCCEEEEEHHHCCCCC >Mature Secondary Structure AVDTSPRSTTWTYVDGEWLAGNPPLIGPTSHAMWLGSTVFDGARWFDGIAPDLDLHCRR CCCCCCCCCEEEEECCEEECCCCCCCCCCCCCEEECCHHHCCHHHHCCCCCCHHHHHHH VNRSAEALGLRPTMTAQAIEALAWEGVKKFDGQTAIYVKPMYWGEHGSWSVVAVDPESTR HCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEECCCCCE FALCLFEAPMGNGHAGSSLTLSPFRRPTVECMPTDAKAGCLYPNNARILNEARSRGFDNA EEEEEEECCCCCCCCCCCEEECCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHCCCCHH LVRDMLGNIAETGSSNIFMVRDGVVFTPAANKTFLAGITRSRVMDLLREAGLQVIETDLT HHHHHHHHHHHCCCCCEEEEECCEEECCCCCCEEEEHHHHHHHHHHHHHCCCEEEECCCC MADFEAADEIFTSGNYSKVLPVTRIEQRELQAGPVTGKARDLYMDWAHTTGRR HHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCCCCCCEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA