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The map label for this gene is ybiS [C]

Identifier: 150395799

GI number: 150395799

Start: 625670

End: 626353

Strand: Direct

Name: ybiS [C]

Synonym: Smed_0575

Alternate gene names: 150395799

Gene position: 625670-626353 (Clockwise)

Preceding gene: 150395798

Following gene: 150395801

Centisome position: 16.54

GC content: 62.72

Gene sequence:

>684_bases
ATGAACACCGACCGCTTCCGCCAGCAGACAATGCCGGTCTACCGCAACCCTGCGCTGGAAAGCCGTTGGGGCCCGCCGGG
CGGCATTTATGAGGGGCCGGTGGGCGAGGGACCGATCGGCTTGCCGCCCCAGGACGCCTATTACGCAGAGATCTATGCAG
CGCAGGAGGACGGGGGATTCCTCGTTCCGGCCGTGCCATTCAGGCAGATCGATCCGCGGTTCTATCGTCAGGAGGTCAGC
GATCCTTTTGGCGAGGCTCCCGGCACGATCGTCGTCGACACGGCCGACCGCTATCTCTACCTGATCCAGCCGCGCGGGCG
TGCGATGCGCTACGGCGTCGGCTTGGGCCGGGAAGGGTTTGCATGGTCGGGCCGCGGCGTGATTCAATGGAAGCAGAAAT
GGCCCAAGTGGACGCCCCCGAACGAGATGGTGGCCCGTCAGCCGGTACTGGCGAAATATTCCGCGGATAATGGGGGCATG
CCCCCGGGCCTGGACAACCCGCTTGGGGCACGCGCGCTTTATATCTTCCAGAACGGTCAGGATACGCTCTATCGTGTCCA
TGGCTCGCCTGAATGGCAGTCGATCGGCAAAGCGGTGTCATCGGGTTGCGTGCGCTTGATCAACCAGGACGTGATTGATC
TTTATGATCGTGTGCGCAACAAGTCGCCGATCCTCGTCGTCTGA

Upstream 100 bases:

>100_bases
GAGTTCGATGTCATCACTGCCAGTTTTTTCCCGACGTCAGTTTCTTCGCACATCCGGGTTGGCAATCGCCTCCGCCGGGC
TTGCGGGTTGCACTTCTTCG

Downstream 100 bases:

>100_bases
CGTCTGGTGCTCATTTGCCCCGCGGCCTCAGCTTTCTTGATGGCGGCCGGCGAGCCGCTGCGTCAGCCGATGCAGTGCGT
CGCGCATCTCCCGGACTTCC

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; ErfK/YbiS/YcfS/YnhG Family Protein/Tat Domain Protein; ErfK/YbiS/YhnG Oxidoreductase; Protein Ybis; ErfK/YbiS/YcfS/YnhG Superfamily; Twin-Arginine Translocation Pathway Signal; Carnitine Operon Oxidoreductase; Carnitine Operon Oxidoreductase CaiA; ATP Synthase Subunit; Protein ErfK/SrfK; ErfK/YbiS/YhnG Protein; Signal Peptide Protein; Exported ErfK/YbiS/YhnG Family Protein; Exported ErfK/YbiS/YhnG Protein; ErfK/YbiS/YhnG Family Protein

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNTDRFRQQTMPVYRNPALESRWGPPGGIYEGPVGEGPIGLPPQDAYYAEIYAAQEDGGFLVPAVPFRQIDPRFYRQEVS
DPFGEAPGTIVVDTADRYLYLIQPRGRAMRYGVGLGREGFAWSGRGVIQWKQKWPKWTPPNEMVARQPVLAKYSADNGGM
PPGLDNPLGARALYIFQNGQDTLYRVHGSPEWQSIGKAVSSGCVRLINQDVIDLYDRVRNKSPILVV

Sequences:

>Translated_227_residues
MNTDRFRQQTMPVYRNPALESRWGPPGGIYEGPVGEGPIGLPPQDAYYAEIYAAQEDGGFLVPAVPFRQIDPRFYRQEVS
DPFGEAPGTIVVDTADRYLYLIQPRGRAMRYGVGLGREGFAWSGRGVIQWKQKWPKWTPPNEMVARQPVLAKYSADNGGM
PPGLDNPLGARALYIFQNGQDTLYRVHGSPEWQSIGKAVSSGCVRLINQDVIDLYDRVRNKSPILVV
>Mature_227_residues
MNTDRFRQQTMPVYRNPALESRWGPPGGIYEGPVGEGPIGLPPQDAYYAEIYAAQEDGGFLVPAVPFRQIDPRFYRQEVS
DPFGEAPGTIVVDTADRYLYLIQPRGRAMRYGVGLGREGFAWSGRGVIQWKQKWPKWTPPNEMVARQPVLAKYSADNGGM
PPGLDNPLGARALYIFQNGQDTLYRVHGSPEWQSIGKAVSSGCVRLINQDVIDLYDRVRNKSPILVV

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788299, Length=133, Percent_Identity=34.5864661654135, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25385; Mature: 25385

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDRFRQQTMPVYRNPALESRWGPPGGIYEGPVGEGPIGLPPQDAYYAEIYAAQEDGGF
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCE
LVPAVPFRQIDPRFYRQEVSDPFGEAPGTIVVDTADRYLYLIQPRGRAMRYGVGLGREGF
EECCCCHHHCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCC
AWSGRGVIQWKQKWPKWTPPNEMVARQPVLAKYSADNGGMPPGLDNPLGARALYIFQNGQ
EECCCCEEEEHHHCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCC
DTLYRVHGSPEWQSIGKAVSSGCVRLINQDVIDLYDRVRNKSPILVV
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
>Mature Secondary Structure
MNTDRFRQQTMPVYRNPALESRWGPPGGIYEGPVGEGPIGLPPQDAYYAEIYAAQEDGGF
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCE
LVPAVPFRQIDPRFYRQEVSDPFGEAPGTIVVDTADRYLYLIQPRGRAMRYGVGLGREGF
EECCCCHHHCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCC
AWSGRGVIQWKQKWPKWTPPNEMVARQPVLAKYSADNGGMPPGLDNPLGARALYIFQNGQ
EECCCCEEEEHHHCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCC
DTLYRVHGSPEWQSIGKAVSSGCVRLINQDVIDLYDRVRNKSPILVV
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA