Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is yeaZ [H]
Identifier: 150395265
GI number: 150395265
Start: 38810
End: 39466
Strand: Direct
Name: yeaZ [H]
Synonym: Smed_0037
Alternate gene names: 150395265
Gene position: 38810-39466 (Clockwise)
Preceding gene: 150395264
Following gene: 150395266
Centisome position: 1.03
GC content: 65.14
Gene sequence:
>657_bases ATGTTTGTTCTTGCCATAGATACATCCGGGGCCGGCTGTTTCGCTGCGGTCTATGACGGTGGCGCAGGAAAGCTGCTTGC GTGTGCGGGCGCGGATATCGGGCGTGGCCATGCCGAACGCCTTATGGAATTCGTTGATGAGGCCTTGAGCGCCTCGGGTC GGGAACTTGCCGAGATCGACCGCATCGCCGTGACGACAGGTCCGGGATCGTTCACCGGAATCCGCGTCGGCGTTGCCGCT GCGCGCGGCCTCGCTCTGGCCCTCGCAAAGCCCGCAGTCGGCATAACCACGCTTCGGGCCGTTGCCGAAAGCGAAAGCCT GAAACAGAATGGCCAGCCGGTGCTCGCCGTGATCGACGCGAAGCGGGAAGAGGTTTACCTTCAGGCTTTCGATGCCTCGG GACGGCCGCAAGGCGAGGCTGAAATCCTGTCCGTCGAGAAAGCGCGCCTGCGCTTTTCCGGATTTGCCGGTATCATCTGT GGCTCCGGTGCTCATGCCGTCACCGGTGCCGCGGGCGGAAAGCCTGACGAGGTCGACATGGAGACGCTCGCCCGGCTGGG CGCCATGGCCGATCCGGCCTCGGCGCCTGCGAAGCCGCTTTATCTGCGCGGGCCGGATGCCAAACCCCAGGCTGGCTTCG CGGTGGTCCGCGCCTGA
Upstream 100 bases:
>100_bases CACAAATGTGATTCCGAAGTGCCGCGTCGATTTGGTGACGCAATGCGGCTGCCCACGCAGTCGTACCGCTTGGGGTGCAG GGGAGGAGGCCGCGGCTGAA
Downstream 100 bases:
>100_bases CCGGAAGAAGCCGAGCATATTCGCCCGGTTATCTTCAGCCAATCATATCTCCTAAAACGTCCAAGAAGCGCCCTGATGAG CCTTACCGACTACTTCACCC
Product: peptidase M22 glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEIDRIAVTTGPGSFTGIRVGVAA ARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDAKREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIIC GSGAHAVTGAAGGKPDEVDMETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA
Sequences:
>Translated_218_residues MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEIDRIAVTTGPGSFTGIRVGVAA ARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDAKREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIIC GSGAHAVTGAAGGKPDEVDMETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA >Mature_218_residues MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEIDRIAVTTGPGSFTGIRVGVAA ARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDAKREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIIC GSGAHAVTGAAGGKPDEVDMETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=174, Percent_Identity=34.4827586206897, Blast_Score=94, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 22093; Mature: 22093
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEID CEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHC RIAVTTGPGSFTGIRVGVAAARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDA EEEEEECCCCCCEEEEHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC KREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIICGSGAHAVTGAAGGKPDEVDM CCCEEEEEEECCCCCCCCCHHEEEHHHHHEEECCCEEEEECCCCCEEECCCCCCCCCCCH ETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEC >Mature Secondary Structure MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEID CEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHC RIAVTTGPGSFTGIRVGVAAARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDA EEEEEECCCCCCEEEEHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC KREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIICGSGAHAVTGAAGGKPDEVDM CCCEEEEEEECCCCCCCCCHHEEEHHHHHEEECCCEEEEECCCCCEEECCCCCCCCCCCH ETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]