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The map label for this gene is dcd

Identifier: 150401833

GI number: 150401833

Start: 1467600

End: 1468205

Strand: Direct

Name: dcd

Synonym: Maeo_1411

Alternate gene names: 150401833

Gene position: 1467600-1468205 (Clockwise)

Preceding gene: 150401832

Following gene: 150401834

Centisome position: 93.51

GC content: 31.85

Gene sequence:

>606_bases
ATGATGTTAAGCGATAATGATATAATTAAAGAAATTGATTCAGGAGGTTTGGTAATAGAACCTTTTAATAAAGAATTTGT
TGGACCCTGCTCCTACGATATTACACTTGGAGATGAATTTATAGTATATACAGATGAAGTTTATGATTTAAAGAAAGAAT
TAAATCATAATAAGTTTAAAATAGAAAACTCCATAATGGTATGCCCATTATGTTATGAATTAGACGATGAAAAAATAGAA
TATTTTAAAAATAAATACGGCGTTGATGTTGTAGTTAAAGGTGGATTGCTTGGAACCACAACTGAATTTGTGGAGCTCCC
CAATGATATATGTGCCCAGTATCAAGGTAGAAGTAGTTTTGGTAGGGTGTTTTTACAATCACACCAAACAGCGGGATGGA
TTGACGCAGGTTTTAAAGGTAAAATAACTCTTGAAATAGTGGCCTATGATAAGCCGGTAATTCTTTATAAAAATCAAAGG
ATAGGACAATTAATATTCTCTAAAACCCTAACGCCTGCAAATATTGGGTATTGTGATAGAAAAGGCTCTAAATATGGGGG
ACAAAATTCTGTAAATGCATCACTTATACACAAAGATGAAATATAA

Upstream 100 bases:

>100_bases
AAATAAAAGTTAATCCTTCGGATAGATATAAATCGGTCGAAATACGGTAAAAAATTATCTCAAAAAATCCAAAGATTTTT
ATACGATTTTGGGTGAAAAT

Downstream 100 bases:

>100_bases
ATAATATATTATAATATATCTAACATATTCTTGGTACTAAAAAAGAATAATAATATTTAATAGATATTTAACAGAAAATA
AAAAATAAAATAAAGAGGAT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MMLSDNDIIKEIDSGGLVIEPFNKEFVGPCSYDITLGDEFIVYTDEVYDLKKELNHNKFKIENSIMVCPLCYELDDEKIE
YFKNKYGVDVVVKGGLLGTTTEFVELPNDICAQYQGRSSFGRVFLQSHQTAGWIDAGFKGKITLEIVAYDKPVILYKNQR
IGQLIFSKTLTPANIGYCDRKGSKYGGQNSVNASLIHKDEI

Sequences:

>Translated_201_residues
MMLSDNDIIKEIDSGGLVIEPFNKEFVGPCSYDITLGDEFIVYTDEVYDLKKELNHNKFKIENSIMVCPLCYELDDEKIE
YFKNKYGVDVVVKGGLLGTTTEFVELPNDICAQYQGRSSFGRVFLQSHQTAGWIDAGFKGKITLEIVAYDKPVILYKNQR
IGQLIFSKTLTPANIGYCDRKGSKYGGQNSVNASLIHKDEI
>Mature_201_residues
MMLSDNDIIKEIDSGGLVIEPFNKEFVGPCSYDITLGDEFIVYTDEVYDLKKELNHNKFKIENSIMVCPLCYELDDEKIE
YFKNKYGVDVVVKGGLLGTTTEFVELPNDICAQYQGRSSFGRVFLQSHQTAGWIDAGFKGKITLEIVAYDKPVILYKNQR
IGQLIFSKTLTPANIGYCDRKGSKYGGQNSVNASLIHKDEI

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

Organism=Escherichia coli, GI1788379, Length=208, Percent_Identity=32.6923076923077, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_META3 (A6UWW5)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325599.1
- ProteinModelPortal:   A6UWW5
- SMR:   A6UWW5
- STRING:   A6UWW5
- GeneID:   5326890
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_1411
- eggNOG:   arNOG05800
- HOGENOM:   HBG553199
- OMA:   HQTAGWI
- ProtClustDB:   CLSK876187
- BioCyc:   MAEO419665:MAEO_1411-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 22662; Mature: 22662

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLSDNDIIKEIDSGGLVIEPFNKEFVGPCSYDITLGDEFIVYTDEVYDLKKELNHNKFK
CCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHCCCCEEE
IENSIMVCPLCYELDDEKIEYFKNKYGVDVVVKGGLLGTTTEFVELPNDICAQYQGRSSF
ECCCEEEEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCHHHHHHCCCCCHH
GRVFLQSHQTAGWIDAGFKGKITLEIVAYDKPVILYKNQRIGQLIFSKTLTPANIGYCDR
HHHEEECCCCCCEECCCCCCEEEEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCCCC
KGSKYGGQNSVNASLIHKDEI
CCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MMLSDNDIIKEIDSGGLVIEPFNKEFVGPCSYDITLGDEFIVYTDEVYDLKKELNHNKFK
CCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHCCCCEEE
IENSIMVCPLCYELDDEKIEYFKNKYGVDVVVKGGLLGTTTEFVELPNDICAQYQGRSSF
ECCCEEEEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCHHHHHHCCCCCHH
GRVFLQSHQTAGWIDAGFKGKITLEIVAYDKPVILYKNQRIGQLIFSKTLTPANIGYCDR
HHHEEECCCCCCEECCCCCCEEEEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCCCC
KGSKYGGQNSVNASLIHKDEI
CCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA