Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401805
Identifier: 150401805
GI number: 150401805
Start: 1448269
End: 1449123
Strand: Direct
Name: 150401805
Synonym: Maeo_1383
Alternate gene names: NA
Gene position: 1448269-1449123 (Clockwise)
Preceding gene: 150401804
Following gene: 150401806
Centisome position: 92.28
GC content: 35.67
Gene sequence:
>855_bases ATGGGAGTAAGAAATCCTGTTGTGGCTGGTGCATTTTATCCATCAGACCCAAATGAATTAATTGAAATAATAGAATACTG TTATTTTCATAAATTGGGGCCTAACACAATCCCAATAGGTGGAGAATATAAAAAGCCTGTTGGAGTGATTGCCCCTCATG CAGGTTATATTTATTCGGGAGCTCCTGCTGCATATTCATATAGTGCTATTTCGGAAAGAGTTAGCGGGGATATCACGGCA ATAATAATTGGCCCAAATCATACTGGATTAGGTGAAGGAGTTTCAGTTATGGACGGCATATGGAAAACTCCTTTGGGAGA TGTTTCCACAGATACAGAATTTATCGATAAATTATGGAAGGAATGCGATGTAGTAGAATTAGATGAACTGGCACATAGTA GGGAACATTCCATAGAAATTCAACTACCATTTTTACAGCATATTGCATTAAGACAAAGCGTAAAATTTAAAATTGTTCCA ATTTGTATGGCTATGCAGGACTATGAAACTTCAATGGATGTTGGGTATTTTATAGCAAAAATAGCTAAGGAATTAAATAG AAATGTAATAATTATAGCATCCACTGATTTTAGTCATTATGAGCCACAGGAAAATGCTTCAAAAAAAGATGCTTTAATCA TAAAAAATATATTGGCAATGGATGAAAAAAGTTTATATTCTGATGCCATAACCTACAATATATCTATGTGTGGATATGGC CCCACCATGGCAATGATTAGGGCAATGAAGGAGCTTGGTGCAACTACCTCAAAATTGTTATCCTACTGCACTTCGGGAGA TATTACTGGGGATTATTCTTCTGTTGTAGGATATGGTTCGCTTTTAATAGAGTAA
Upstream 100 bases:
>100_bases TATGCTAATATCATATTTAAAATATTAATGTTTTATATTATTATGATTATAATATTATACATATTATAATTAATACTAAT TTATCATTGGTGGTGAAACT
Downstream 100 bases:
>100_bases ATTATATAATTATAATATAATTATATTAATATACATATATAAATATATAATTATTTTAAAAAAATAATATTCAAAAAAAT AACTTACAACAAAAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGVRNPVVAGAFYPSDPNELIEIIEYCYFHKLGPNTIPIGGEYKKPVGVIAPHAGYIYSGAPAAYSYSAISERVSGDITA IIIGPNHTGLGEGVSVMDGIWKTPLGDVSTDTEFIDKLWKECDVVELDELAHSREHSIEIQLPFLQHIALRQSVKFKIVP ICMAMQDYETSMDVGYFIAKIAKELNRNVIIIASTDFSHYEPQENASKKDALIIKNILAMDEKSLYSDAITYNISMCGYG PTMAMIRAMKELGATTSKLLSYCTSGDITGDYSSVVGYGSLLIE
Sequences:
>Translated_284_residues MGVRNPVVAGAFYPSDPNELIEIIEYCYFHKLGPNTIPIGGEYKKPVGVIAPHAGYIYSGAPAAYSYSAISERVSGDITA IIIGPNHTGLGEGVSVMDGIWKTPLGDVSTDTEFIDKLWKECDVVELDELAHSREHSIEIQLPFLQHIALRQSVKFKIVP ICMAMQDYETSMDVGYFIAKIAKELNRNVIIIASTDFSHYEPQENASKKDALIIKNILAMDEKSLYSDAITYNISMCGYG PTMAMIRAMKELGATTSKLLSYCTSGDITGDYSSVVGYGSLLIE >Mature_283_residues GVRNPVVAGAFYPSDPNELIEIIEYCYFHKLGPNTIPIGGEYKKPVGVIAPHAGYIYSGAPAAYSYSAISERVSGDITAI IIGPNHTGLGEGVSVMDGIWKTPLGDVSTDTEFIDKLWKECDVVELDELAHSREHSIEIQLPFLQHIALRQSVKFKIVPI CMAMQDYETSMDVGYFIAKIAKELNRNVIIIASTDFSHYEPQENASKKDALIIKNILAMDEKSLYSDAITYNISMCGYGP TMAMIRAMKELGATTSKLLSYCTSGDITGDYSSVVGYGSLLIE
Specific function: Unknown
COG id: COG1355
COG function: function code R; Predicted dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0103 family [H]
Homologues:
Organism=Homo sapiens, GI7705720, Length=257, Percent_Identity=24.9027237354086, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25146594, Length=242, Percent_Identity=26.8595041322314, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI32566861, Length=287, Percent_Identity=25.7839721254355, Blast_Score=75, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6322467, Length=217, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357419, Length=306, Percent_Identity=27.7777777777778, Blast_Score=88, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020619 - InterPro: IPR002737 [H]
Pfam domain/function: PF01875 Memo [H]
EC number: NA
Molecular weight: Translated: 31130; Mature: 30999
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRNPVVAGAFYPSDPNELIEIIEYCYFHKLGPNTIPIGGEYKKPVGVIAPHAGYIYSG CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEECC APAAYSYSAISERVSGDITAIIIGPNHTGLGEGVSVMDGIWKTPLGDVSTDTEFIDKLWK CCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH ECDVVELDELAHSREHSIEIQLPFLQHIALRQSVKFKIVPICMAMQDYETSMDVGYFIAK HCCCEEHHHHHCCCCCEEEEEEHHHHHHHHHHCCCEEEEEEEHHHHHHCCHHHHHHHHHH IAKELNRNVIIIASTDFSHYEPQENASKKDALIIKNILAMDEKSLYSDAITYNISMCGYG HHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC PTMAMIRAMKELGATTSKLLSYCTSGDITGDYSSVVGYGSLLIE HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCCEEEC >Mature Secondary Structure GVRNPVVAGAFYPSDPNELIEIIEYCYFHKLGPNTIPIGGEYKKPVGVIAPHAGYIYSG CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEECC APAAYSYSAISERVSGDITAIIIGPNHTGLGEGVSVMDGIWKTPLGDVSTDTEFIDKLWK CCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH ECDVVELDELAHSREHSIEIQLPFLQHIALRQSVKFKIVPICMAMQDYETSMDVGYFIAK HCCCEEHHHHHCCCCCEEEEEEHHHHHHHHHHCCCEEEEEEEHHHHHHCCHHHHHHHHHH IAKELNRNVIIIASTDFSHYEPQENASKKDALIIKNILAMDEKSLYSDAITYNISMCGYG HHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC PTMAMIRAMKELGATTSKLLSYCTSGDITGDYSSVVGYGSLLIE HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]