Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is cbiX
Identifier: 150401803
GI number: 150401803
Start: 1446341
End: 1446772
Strand: Direct
Name: cbiX
Synonym: Maeo_1381
Alternate gene names: 150401803
Gene position: 1446341-1446772 (Clockwise)
Preceding gene: 150401799
Following gene: 150401804
Centisome position: 92.15
GC content: 35.65
Gene sequence:
>432_bases ATGGAAGCATTAGTTTTGTTAGGTCATGGAAGTAGATTACCTTATTCAAAAGAAATAGTTGGAAAAGTTGCAGAAAAGAT AAAAGAAAAAAATATTTATGATATTGTAGAAATTGGAATGATGGAATTCAATGAGCCAACCATACCTCAAACAATTAATA AAGTTATAGCAGAAGGAGCTAAAAAAATTATAATTGTGCCTGTATTTTTAGCACATGGAAACCATACAAAAAGAGATATT CCACAAATATTGGGATTAATCGAATGTGAGGAGCATCACCACGAGGGGGAAGGGGGACATCACCACCATCACCACCATCA CCATGGTGAAAAAATAGAGGTGCCAGAGGGCGTTGAGATAATATACAGAGACCCAATGGGTGCAGACGATAGAGTTGTTG ATATTGTTTTAGATAGGGCAAAAGGAAATTAA
Upstream 100 bases:
>100_bases AAAAAGACCGAAGATTGACTATAAATATAATCTTGCGATTATGAAATATGGAGATGCAAAAAGTTTGAGCGAACTATAAT AAAAAAATTAGAGGTATAAT
Downstream 100 bases:
>100_bases CTTATGTCGGCGAGAAGTCAGATGAAAAACCGCATATATGTTTTTCATTAACCCTGTTAAAATATATTAGATAAATTTAT ATATTCTTTTTTGATATTAT
Product: sirohydrochlorin cobaltochelatase
Products: NA
Alternate protein names: CbiXS
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MEALVLLGHGSRLPYSKEIVGKVAEKIKEKNIYDIVEIGMMEFNEPTIPQTINKVIAEGAKKIIIVPVFLAHGNHTKRDI PQILGLIECEEHHHEGEGGHHHHHHHHHGEKIEVPEGVEIIYRDPMGADDRVVDIVLDRAKGN
Sequences:
>Translated_143_residues MEALVLLGHGSRLPYSKEIVGKVAEKIKEKNIYDIVEIGMMEFNEPTIPQTINKVIAEGAKKIIIVPVFLAHGNHTKRDI PQILGLIECEEHHHEGEGGHHHHHHHHHGEKIEVPEGVEIIYRDPMGADDRVVDIVLDRAKGN >Mature_143_residues MEALVLLGHGSRLPYSKEIVGKVAEKIKEKNIYDIVEIGMMEFNEPTIPQTINKVIAEGAKKIIIVPVFLAHGNHTKRDI PQILGLIECEEHHHEGEGGHHHHHHHHHGEKIEVPEGVEIIYRDPMGADDRVVDIVLDRAKGN
Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiX family. CbiXS subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CBIX_META3 (A6UWT5)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325569.1 - ProteinModelPortal: A6UWT5 - SMR: A6UWT5 - STRING: A6UWT5 - GeneID: 5326995 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1381 - eggNOG: arNOG11866 - HOGENOM: HBG686532 - OMA: FNEPTIP - ProtClustDB: PRK00923 - BioCyc: MAEO419665:MAEO_1381-MONOMER - HAMAP: MF_00785 - InterPro: IPR002762
Pfam domain/function: PF01903 CbiX
EC number: =4.99.1.3
Molecular weight: Translated: 16091; Mature: 16091
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: ACT_SITE 75-75
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALVLLGHGSRLPYSKEIVGKVAEKIKEKNIYDIVEIGMMEFNEPTIPQTINKVIAEGA CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCC KKIIIVPVFLAHGNHTKRDIPQILGLIECEEHHHEGEGGHHHHHHHHHGEKIEVPEGVEI CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEE IYRDPMGADDRVVDIVLDRAKGN EEECCCCCCCEEEEEEEECCCCC >Mature Secondary Structure MEALVLLGHGSRLPYSKEIVGKVAEKIKEKNIYDIVEIGMMEFNEPTIPQTINKVIAEGA CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCC KKIIIVPVFLAHGNHTKRDIPQILGLIECEEHHHEGEGGHHHHHHHHHGEKIEVPEGVEI CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEE IYRDPMGADDRVVDIVLDRAKGN EEECCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA