| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401625
Identifier: 150401625
GI number: 150401625
Start: 1270626
End: 1272110
Strand: Direct
Name: 150401625
Synonym: Maeo_1202
Alternate gene names: NA
Gene position: 1270626-1272110 (Clockwise)
Preceding gene: 150401624
Following gene: 150401626
Centisome position: 80.96
GC content: 32.66
Gene sequence:
>1485_bases ATGGCAAGAGAACAGTGGAGCTCAAATATAGGATTTATACTGGCAGCAGTAGGTTCAGCTGTTGGCTTAGGAAATATATG GAGATTTCCTTATGTGGTGTATAATAATGGGGGCGGAGCATTTTTAATACCTTATTTTATAGCTCTTTTATGTGTGGGCA TATCTGTTATATTGCTTGAATTAGTTCTTGGGCATTCTACAAGAGGTTCTGCACCACTGGCATTTAGAAAACTGTCTGAG AAATATGAATGGATAGGCTGGTTGGCTGTAATTTCTGGATTTACTATTACTACCTATTATATGGCAATAATCGGGTGGTG TCTATATTATTTAGTTAATTTAATATTATATGGGTTTCCAACTGATTTTACAAGTTATTTTTTTGACGATATATTAAGGA GCTCCATGGGGCCCGAAAATATATGGAGTTTTTCCACAGGAATATTGGCTTCTGTGGCATTGTTGTGGTTAATAAATTAT GTTATTATAAGGTCAGGAGTAAAAAATGGGCTTGAAAAGGCAAATAAACTACTTATGCCATTATTATTTATTCTTACTTT AATTCTCGTTCTTAGGGGTATAACATTACCTGGAGCCATGGATGGAATAAACTGGTATTTAACGCCAGATTTCTCTATTT TATTAAATGCACAAGTATGGATTGCAGCATTTTCACAGATATTTTTCTCTTTGAGTTTGGGATATGGAATAATGATAGCT TATGCAAGTTATCTTCCTAAAAAATCCGATTTAACAACAAATGCTTTTGCCATATCTCTTTTAAATTGCGGGTATTCTTT TTTAGTGGGTTTTGCGGTATTTAGCACTTTGGGATATATGACATATACAACAGGAGTTCCATTAGATGAAATTGTAAGAG ATGGAATAATTCTTGCATTTGTGGTATTTCCAAAAGCTTTATCTTTAATGCCAATTGGAGGATTTGAACTTGCAGTTGTA TTTTTTATGGCTCTTGTGATTGCAGGTATTTCTTCCTCAGTATCTATTATAGAGGCAATAAATGCGGCTGTAATGGATAA GTTTGGAATAAGTAGAAAAAAAGCTATTTTACCAATTGTAATTCTTGGATTTTTTGGTAGTTTATTATATACTACAAATG CAGGTATCCACTGGATTAATATGGTTGATTATTTTACTTCTGGATATTTGCTTCCAATAGTAGGAATTACTGAAACGATA GTGGCTATTTGGATATTTAATGGAAATAAATTTATAGATTATTTAAATAATCTATCAGATATGAAAATAGGAAAATATTG GAAAATATCTGTGGGAATAATTACACCATTACTGTTGTTGGGCATTGTTGGTTCTGGCATATTGGCATTATATGATGCTC CATATGGAGGATATGCATGGAAATATTTGGGTATTGTAGCAATTATGTCGGTTTTCAGTGTTTTATTGTCTTTCTTTATT TCTAAAATTAAGAAGGGGGGAGTAAAAACAAAGCCTAAAAGGTGA
Upstream 100 bases:
>100_bases ATATTATTGCTATATTTATTATCTATTTATGGCTCTAATAAATGAAATATAAAATATTAATAATAATATTAACATCATAG TAAGGTATTGGCATGGTATA
Downstream 100 bases:
>100_bases TTAAATGAATAATTCTGCAATAATTATGTTTTTATTTGGTGCAATAATACTATGGGGTGGTTCAATATATTTTCTTTGGA AGTTATTGAGGAGACATAAA
Product: sodium:neurotransmitter symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MAREQWSSNIGFILAAVGSAVGLGNIWRFPYVVYNNGGGAFLIPYFIALLCVGISVILLELVLGHSTRGSAPLAFRKLSE KYEWIGWLAVISGFTITTYYMAIIGWCLYYLVNLILYGFPTDFTSYFFDDILRSSMGPENIWSFSTGILASVALLWLINY VIIRSGVKNGLEKANKLLMPLLFILTLILVLRGITLPGAMDGINWYLTPDFSILLNAQVWIAAFSQIFFSLSLGYGIMIA YASYLPKKSDLTTNAFAISLLNCGYSFLVGFAVFSTLGYMTYTTGVPLDEIVRDGIILAFVVFPKALSLMPIGGFELAVV FFMALVIAGISSSVSIIEAINAAVMDKFGISRKKAILPIVILGFFGSLLYTTNAGIHWINMVDYFTSGYLLPIVGITETI VAIWIFNGNKFIDYLNNLSDMKIGKYWKISVGIITPLLLLGIVGSGILALYDAPYGGYAWKYLGIVAIMSVFSVLLSFFI SKIKKGGVKTKPKR
Sequences:
>Translated_494_residues MAREQWSSNIGFILAAVGSAVGLGNIWRFPYVVYNNGGGAFLIPYFIALLCVGISVILLELVLGHSTRGSAPLAFRKLSE KYEWIGWLAVISGFTITTYYMAIIGWCLYYLVNLILYGFPTDFTSYFFDDILRSSMGPENIWSFSTGILASVALLWLINY VIIRSGVKNGLEKANKLLMPLLFILTLILVLRGITLPGAMDGINWYLTPDFSILLNAQVWIAAFSQIFFSLSLGYGIMIA YASYLPKKSDLTTNAFAISLLNCGYSFLVGFAVFSTLGYMTYTTGVPLDEIVRDGIILAFVVFPKALSLMPIGGFELAVV FFMALVIAGISSSVSIIEAINAAVMDKFGISRKKAILPIVILGFFGSLLYTTNAGIHWINMVDYFTSGYLLPIVGITETI VAIWIFNGNKFIDYLNNLSDMKIGKYWKISVGIITPLLLLGIVGSGILALYDAPYGGYAWKYLGIVAIMSVFSVLLSFFI SKIKKGGVKTKPKR >Mature_493_residues AREQWSSNIGFILAAVGSAVGLGNIWRFPYVVYNNGGGAFLIPYFIALLCVGISVILLELVLGHSTRGSAPLAFRKLSEK YEWIGWLAVISGFTITTYYMAIIGWCLYYLVNLILYGFPTDFTSYFFDDILRSSMGPENIWSFSTGILASVALLWLINYV IIRSGVKNGLEKANKLLMPLLFILTLILVLRGITLPGAMDGINWYLTPDFSILLNAQVWIAAFSQIFFSLSLGYGIMIAY ASYLPKKSDLTTNAFAISLLNCGYSFLVGFAVFSTLGYMTYTTGVPLDEIVRDGIILAFVVFPKALSLMPIGGFELAVVF FMALVIAGISSSVSIIEAINAAVMDKFGISRKKAILPIVILGFFGSLLYTTNAGIHWINMVDYFTSGYLLPIVGITETIV AIWIFNGNKFIDYLNNLSDMKIGKYWKISVGIITPLLLLGIVGSGILALYDAPYGGYAWKYLGIVAIMSVFSVLLSFFIS KIKKGGVKTKPKR
Specific function: Putative sodium-dependent transporter [H]
COG id: COG0733
COG function: function code R; Na+-dependent transporters of the SNF family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]
Homologues:
Organism=Homo sapiens, GI7657587, Length=485, Percent_Identity=32.7835051546392, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI4507043, Length=496, Percent_Identity=31.6532258064516, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI21361581, Length=467, Percent_Identity=31.9057815845824, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI4507041, Length=495, Percent_Identity=30.5050505050505, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI171184408, Length=481, Percent_Identity=32.6403326403326, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI171184406, Length=481, Percent_Identity=32.6403326403326, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI171184404, Length=481, Percent_Identity=32.6403326403326, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI134304856, Length=530, Percent_Identity=31.1320754716981, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI6005715, Length=536, Percent_Identity=30.2238805970149, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI289191377, Length=498, Percent_Identity=31.1244979919679, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI289191351, Length=498, Percent_Identity=31.1244979919679, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI4557046, Length=498, Percent_Identity=31.1244979919679, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI197276623, Length=482, Percent_Identity=32.3651452282158, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI54607094, Length=482, Percent_Identity=32.3651452282158, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI188528618, Length=478, Percent_Identity=29.9163179916318, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI5032097, Length=485, Percent_Identity=30.5154639175258, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI92859670, Length=531, Percent_Identity=27.8719397363465, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI67782317, Length=512, Percent_Identity=27.34375, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI67782313, Length=495, Percent_Identity=27.8787878787879, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI67782315, Length=495, Percent_Identity=27.8787878787879, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI194018524, Length=536, Percent_Identity=29.4776119402985, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI218563756, Length=485, Percent_Identity=30.7216494845361, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI51468073, Length=515, Percent_Identity=25.0485436893204, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI300360519, Length=312, Percent_Identity=31.4102564102564, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI11181770, Length=520, Percent_Identity=25.9615384615385, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI289191353, Length=414, Percent_Identity=28.5024154589372, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI58219014, Length=303, Percent_Identity=31.6831683168317, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI33354281, Length=302, Percent_Identity=31.7880794701987, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI12408638, Length=505, Percent_Identity=25.1485148514851, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI218563758, Length=325, Percent_Identity=30.4615384615385, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI197276625, Length=140, Percent_Identity=38.5714285714286, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI21361693, Length=121, Percent_Identity=40.495867768595, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI55749589, Length=282, Percent_Identity=24.113475177305, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI226437581, Length=254, Percent_Identity=26.7716535433071, Blast_Score=84, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17555248, Length=511, Percent_Identity=31.5068493150685, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17554804, Length=502, Percent_Identity=30.6772908366534, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71995588, Length=473, Percent_Identity=31.7124735729387, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI25146584, Length=458, Percent_Identity=29.6943231441048, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI212642127, Length=483, Percent_Identity=28.1573498964803, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI133952791, Length=536, Percent_Identity=25.7462686567164, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI71998244, Length=471, Percent_Identity=29.0870488322718, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17569475, Length=415, Percent_Identity=26.7469879518072, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17535731, Length=373, Percent_Identity=26.0053619302949, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17542050, Length=304, Percent_Identity=31.5789473684211, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17542048, Length=399, Percent_Identity=23.8095238095238, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI115534083, Length=356, Percent_Identity=22.4719101123595, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI25143236, Length=556, Percent_Identity=22.841726618705, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24762620, Length=476, Percent_Identity=31.3025210084034, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI281364136, Length=523, Percent_Identity=29.2543021032505, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI19921936, Length=478, Percent_Identity=30.7531380753138, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI45550877, Length=517, Percent_Identity=29.7872340425532, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI281365034, Length=485, Percent_Identity=29.4845360824742, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI281363702, Length=492, Percent_Identity=30.6910569105691, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI24661428, Length=490, Percent_Identity=28.5714285714286, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24652942, Length=477, Percent_Identity=29.1404612159329, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI45551088, Length=477, Percent_Identity=29.1404612159329, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI17136952, Length=499, Percent_Identity=27.8557114228457, Blast_Score=197, Evalue=9e-51, Organism=Drosophila melanogaster, GI19921352, Length=491, Percent_Identity=27.4949083503055, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24584353, Length=491, Percent_Identity=27.4949083503055, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24639514, Length=493, Percent_Identity=29.2089249492901, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI221329674, Length=493, Percent_Identity=29.2089249492901, Blast_Score=195, Evalue=7e-50, Organism=Drosophila melanogaster, GI281364394, Length=479, Percent_Identity=28.6012526096033, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI28574704, Length=479, Percent_Identity=28.6012526096033, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI17136950, Length=479, Percent_Identity=28.6012526096033, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI28574702, Length=479, Percent_Identity=28.6012526096033, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24582567, Length=471, Percent_Identity=30.1486199575372, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI45551183, Length=413, Percent_Identity=31.9612590799031, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24639516, Length=513, Percent_Identity=28.0701754385965, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24654186, Length=351, Percent_Identity=33.6182336182336, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24639853, Length=492, Percent_Identity=27.6422764227642, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24655079, Length=532, Percent_Identity=27.0676691729323, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI281363700, Length=331, Percent_Identity=32.6283987915408, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24582569, Length=434, Percent_Identity=28.110599078341, Blast_Score=145, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000175 [H]
Pfam domain/function: PF00209 SNF [H]
EC number: NA
Molecular weight: Translated: 54329; Mature: 54198
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS00610 NA_NEUROTRAN_SYMP_1 ; PS50267 NA_NEUROTRAN_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREQWSSNIGFILAAVGSAVGLGNIWRFPYVVYNNGGGAFLIPYFIALLCVGISVILLE CCCHHHCCCCHHHHHHHHHHHCCCCHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHH LVLGHSTRGSAPLAFRKLSEKYEWIGWLAVISGFTITTYYMAIIGWCLYYLVNLILYGFP HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC TDFTSYFFDDILRSSMGPENIWSFSTGILASVALLWLINYVIIRSGVKNGLEKANKLLMP CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFILTLILVLRGITLPGAMDGINWYLTPDFSILLNAQVWIAAFSQIFFSLSLGYGIMIA HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH YASYLPKKSDLTTNAFAISLLNCGYSFLVGFAVFSTLGYMTYTTGVPLDEIVRDGIILAF HHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHH VVFPKALSLMPIGGFELAVVFFMALVIAGISSSVSIIEAINAAVMDKFGISRKKAILPIV HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH ILGFFGSLLYTTNAGIHWINMVDYFTSGYLLPIVGITETIVAIWIFNGNKFIDYLNNLSD HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHEEEEECCCHHHHHHCCCCC MKIGKYWKISVGIITPLLLLGIVGSGILALYDAPYGGYAWKYLGIVAIMSVFSVLLSFFI CCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH SKIKKGGVKTKPKR HHHHHCCCCCCCCC >Mature Secondary Structure AREQWSSNIGFILAAVGSAVGLGNIWRFPYVVYNNGGGAFLIPYFIALLCVGISVILLE CCHHHCCCCHHHHHHHHHHHCCCCHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHH LVLGHSTRGSAPLAFRKLSEKYEWIGWLAVISGFTITTYYMAIIGWCLYYLVNLILYGFP HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC TDFTSYFFDDILRSSMGPENIWSFSTGILASVALLWLINYVIIRSGVKNGLEKANKLLMP CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFILTLILVLRGITLPGAMDGINWYLTPDFSILLNAQVWIAAFSQIFFSLSLGYGIMIA HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH YASYLPKKSDLTTNAFAISLLNCGYSFLVGFAVFSTLGYMTYTTGVPLDEIVRDGIILAF HHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHH VVFPKALSLMPIGGFELAVVFFMALVIAGISSSVSIIEAINAAVMDKFGISRKKAILPIV HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH ILGFFGSLLYTTNAGIHWINMVDYFTSGYLLPIVGITETIVAIWIFNGNKFIDYLNNLSD HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHEEEEECCCHHHHHHCCCCC MKIGKYWKISVGIITPLLLLGIVGSGILALYDAPYGGYAWKYLGIVAIMSVFSVLLSFFI CCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH SKIKKGGVKTKPKR HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]