| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is cdhC1 [H]
Identifier: 150401594
GI number: 150401594
Start: 1234934
End: 1237225
Strand: Reverse
Name: cdhC1 [H]
Synonym: Maeo_1171
Alternate gene names: 150401594
Gene position: 1237225-1234934 (Counterclockwise)
Preceding gene: 150401595
Following gene: 150401593
Centisome position: 78.83
GC content: 34.42
Gene sequence:
>2292_bases ATGGTTATTAAAAACATAATCGCAGGCGGAAAAACTGTATTAAATCTAACCGTTGATACATTAAAAAATAACAAAGATGA AGATAGTAAAAAAATTGGATTTCTTGAAACAAATTATTATTTGCCTACAATATATGGAATATTAGGTAAAAAAATAGAAA ATATTGGTCAGTTAAAAGAGTTAATTAATTCTCTTGAAATTGAAGATAATGCTGATGCTACGCTAGATGATGCCCTTGAT GCCGGTGTTAAAACATTAATTTGTGCGGAAGCTCTTGAAGCCCTAAAATATATGGATAATGAAACACCATATGAGGCCCC ATATACTGGATTTATCCCGGATAAAATTTTAAGAGATTTAGGGGTTCCACTTGTTAATGGAAAAATACCAGCAATACTTG TTGTGATAGGTAAAGTAGGAGATGAAGAAAAATTAAAATCCCTTATTAACGAAATTAGAAAACGAAATATATTAGGATTA TTCATTGGAGATATTGTAAAAGAAATGGAAGATGCCAATATTGAATTGGGTCTTGATAAACTTCTAGTTCCTGTTGGAGA TAGCATAACCTCAGCAATACATGCTGCAAATTTAGCCATTAGAGCTCCATTGATATACGGGGGCGTTGAAGGAGGAAAAA CAGAAGAAGTTATCGAATATATTGCAAACAGAGTTCCTGCCATTGTTATAGCATTAGGTGAAGTTGATGATATAACACTT GCCGCAGGTGCAGGTTGTATAAAAGCGGGCATTCCAGTAATTACCAATAATCCTGTACCAGAAATTGAAGGTGCATTGGG GAGCTCAGATATAGATAATATTATTGAAAATGCCCTTAAAATGAAAAATATTAAGGTGGAAGAAATGTCAATAGAAGATG TAAATATACCTGTTTCGGTAGGTCCGATGAATGAAGGAGAAAGAGTAAGGGGGCCTGACATGTTTGTTGAATTAGCAGGA CCTAAACAGTATGGGTTTGAACTTGTTAAAGTAGTGGATGATGCATCCGATAAAATTGAGATTATTGGAAAGGATATCGG AGAGATGGAAGCCGGTACAAAAACACCATTTGCTGTAATAATAAATGTAAGCGGGAAAACATTAGAAGATGATTTGGAGG GCGTATTGGAAAGAAGAGTTCATGAGATATTTAATTATATTGAAGGAGTTATGCACCTAAACCAGAGAGATAGCGTATGG ATTAGAATTAATAAAGAATCCGCCGAAAAGGGATTAAATTTAATCCATATCGGAAAAATAATACAAGATATATATAAATC AGAGTTTCCATTCATAGAAAATATAGATGTTAAATTAATAACTGATGCTGACATAGTGAAAGAAGAATTAGAAAAAGTAA AAGAGATATATAAATTTAGAGATGAAAAAACCAAAAATCTCCATGAGGAAGATGTAGATGTATTTTATGGATGTATTATG TGTCAAAGCTTTGCACCTTCCCATGTTTGTATAATTACACCCGATAAACCTGCATTATGTGGTGGTATTAATTACCTCGA TGCAAGAGCTGCGGCAAAAATTGACCCAGATGGACCAATATTTGCAATTGAAAAAGGAGAATGTTTGGATGAAGAAAAAG GAATATATGATTCAGTAAATGAAGTTGTCCAAGATAAATCCCAAGGGGCAATTGAATCAATAACATTACATAGTGTATTG GATAGACCATCTACCTCTTGCGGTTGTTTTGAGGCAATTACATTTTATATCCCAGAAGTTGATGGATTTGGTATAGTAGA TAGAAGTTTTAAAGGGGAAACACCAATGGGAGTTCCATTTTCAGCACTTGCTGGACAATGTAGTGGCGGAAACCAGGTTG AAGGATTCTGCGGCATCTCTGTATCCTATATGAAATCTTCAAAATTCTTTAAGGCCGATGGTGGCTGGGAAAGAGTTGTA TGGCTACCTTCAGAATTAAAAAATAAGGTAATTGATGGAATACCTGAGGAAATGATTCCAAAAATTGCAACAGAAGAAGA TGTATCCAGTATTGAGGAATTAATTGATTTCTTGAAAAAGAACAATCACCCAGTTGCTGAAAATATAGGTTTGGATATGG ATGCAGAGGATATAGAAGTAGTAGAAACCCATACAGAAGAAGAGGAATATATGGGAGATACAGAAGGCGAGGAAGAGGGC ACCATTACAGTACCTACAATGACCATGCCTGCTGGATTTGGAGGACTTCCAAAAGATATTAAAATAGTATTAAAAAATGC AGTTATAAAGGCTGAACAAATAATAATCACTCGAGAGAGCGGTAAAAAATAA
Upstream 100 bases:
>100_bases TAACTAATTATATATATATATTTGTTGATAATTTTAATACATATTATAACGATTAATAATGACATATTGTATATATTATG ATGTTATAAAGAGGTAAAAA
Downstream 100 bases:
>100_bases ACTATATACTTATTTTATTTTTCTTTTTTTATTTTTTTTAGAAAAATTTTGAAAAAATATGGGGACTCCGAATATATTTA TATATTAATATATATCGATT
Product: bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta
Products: CO2; AH2
Alternate protein names: ACDS complex subunit beta 1; ACDS complex acyltransferase 1 [H]
Number of amino acids: Translated: 763; Mature: 763
Protein sequence:
>763_residues MVIKNIIAGGKTVLNLTVDTLKNNKDEDSKKIGFLETNYYLPTIYGILGKKIENIGQLKELINSLEIEDNADATLDDALD AGVKTLICAEALEALKYMDNETPYEAPYTGFIPDKILRDLGVPLVNGKIPAILVVIGKVGDEEKLKSLINEIRKRNILGL FIGDIVKEMEDANIELGLDKLLVPVGDSITSAIHAANLAIRAPLIYGGVEGGKTEEVIEYIANRVPAIVIALGEVDDITL AAGAGCIKAGIPVITNNPVPEIEGALGSSDIDNIIENALKMKNIKVEEMSIEDVNIPVSVGPMNEGERVRGPDMFVELAG PKQYGFELVKVVDDASDKIEIIGKDIGEMEAGTKTPFAVIINVSGKTLEDDLEGVLERRVHEIFNYIEGVMHLNQRDSVW IRINKESAEKGLNLIHIGKIIQDIYKSEFPFIENIDVKLITDADIVKEELEKVKEIYKFRDEKTKNLHEEDVDVFYGCIM CQSFAPSHVCIITPDKPALCGGINYLDARAAAKIDPDGPIFAIEKGECLDEEKGIYDSVNEVVQDKSQGAIESITLHSVL DRPSTSCGCFEAITFYIPEVDGFGIVDRSFKGETPMGVPFSALAGQCSGGNQVEGFCGISVSYMKSSKFFKADGGWERVV WLPSELKNKVIDGIPEEMIPKIATEEDVSSIEELIDFLKKNNHPVAENIGLDMDAEDIEVVETHTEEEEYMGDTEGEEEG TITVPTMTMPAGFGGLPKDIKIVLKNAVIKAEQIIITRESGKK
Sequences:
>Translated_763_residues MVIKNIIAGGKTVLNLTVDTLKNNKDEDSKKIGFLETNYYLPTIYGILGKKIENIGQLKELINSLEIEDNADATLDDALD AGVKTLICAEALEALKYMDNETPYEAPYTGFIPDKILRDLGVPLVNGKIPAILVVIGKVGDEEKLKSLINEIRKRNILGL FIGDIVKEMEDANIELGLDKLLVPVGDSITSAIHAANLAIRAPLIYGGVEGGKTEEVIEYIANRVPAIVIALGEVDDITL AAGAGCIKAGIPVITNNPVPEIEGALGSSDIDNIIENALKMKNIKVEEMSIEDVNIPVSVGPMNEGERVRGPDMFVELAG PKQYGFELVKVVDDASDKIEIIGKDIGEMEAGTKTPFAVIINVSGKTLEDDLEGVLERRVHEIFNYIEGVMHLNQRDSVW IRINKESAEKGLNLIHIGKIIQDIYKSEFPFIENIDVKLITDADIVKEELEKVKEIYKFRDEKTKNLHEEDVDVFYGCIM CQSFAPSHVCIITPDKPALCGGINYLDARAAAKIDPDGPIFAIEKGECLDEEKGIYDSVNEVVQDKSQGAIESITLHSVL DRPSTSCGCFEAITFYIPEVDGFGIVDRSFKGETPMGVPFSALAGQCSGGNQVEGFCGISVSYMKSSKFFKADGGWERVV WLPSELKNKVIDGIPEEMIPKIATEEDVSSIEELIDFLKKNNHPVAENIGLDMDAEDIEVVETHTEEEEYMGDTEGEEEG TITVPTMTMPAGFGGLPKDIKIVLKNAVIKAEQIIITRESGKK >Mature_763_residues MVIKNIIAGGKTVLNLTVDTLKNNKDEDSKKIGFLETNYYLPTIYGILGKKIENIGQLKELINSLEIEDNADATLDDALD AGVKTLICAEALEALKYMDNETPYEAPYTGFIPDKILRDLGVPLVNGKIPAILVVIGKVGDEEKLKSLINEIRKRNILGL FIGDIVKEMEDANIELGLDKLLVPVGDSITSAIHAANLAIRAPLIYGGVEGGKTEEVIEYIANRVPAIVIALGEVDDITL AAGAGCIKAGIPVITNNPVPEIEGALGSSDIDNIIENALKMKNIKVEEMSIEDVNIPVSVGPMNEGERVRGPDMFVELAG PKQYGFELVKVVDDASDKIEIIGKDIGEMEAGTKTPFAVIINVSGKTLEDDLEGVLERRVHEIFNYIEGVMHLNQRDSVW IRINKESAEKGLNLIHIGKIIQDIYKSEFPFIENIDVKLITDADIVKEELEKVKEIYKFRDEKTKNLHEEDVDVFYGCIM CQSFAPSHVCIITPDKPALCGGINYLDARAAAKIDPDGPIFAIEKGECLDEEKGIYDSVNEVVQDKSQGAIESITLHSVL DRPSTSCGCFEAITFYIPEVDGFGIVDRSFKGETPMGVPFSALAGQCSGGNQVEGFCGISVSYMKSSKFFKADGGWERVV WLPSELKNKVIDGIPEEMIPKIATEEDVSSIEELIDFLKKNNHPVAENIGLDMDAEDIEVVETHTEEEEYMGDTEGEEEG TITVPTMTMPAGFGGLPKDIKIVLKNAVIKAEQIIITRESGKK
Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2) [H]
COG id: COG1614
COG function: function code C; CO dehydrogenase/acetyl-CoA synthase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CdhC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004461 - InterPro: IPR011254 - InterPro: IPR016099 [H]
Pfam domain/function: PF03598 CdhC [H]
EC number: 1.2.99.2
Molecular weight: Translated: 83480; Mature: 83480
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIKNIIAGGKTVLNLTVDTLKNNKDEDSKKIGFLETNYYLPTIYGILGKKIENIGQLKE CCCHHHHCCCCEEEEEEHHHHCCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHH LINSLEIEDNADATLDDALDAGVKTLICAEALEALKYMDNETPYEAPYTGFIPDKILRDL HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHC GVPLVNGKIPAILVVIGKVGDEEKLKSLINEIRKRNILGLFIGDIVKEMEDANIELGLDK CCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECHHH LLVPVGDSITSAIHAANLAIRAPLIYGGVEGGKTEEVIEYIANRVPAIVIALGEVDDITL HEECCCHHHHHHHHHHHHEEECCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEE AAGAGCIKAGIPVITNNPVPEIEGALGSSDIDNIIENALKMKNIKVEEMSIEDVNIPVSV ECCCCHHHCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEE GPMNEGERVRGPDMFVELAGPKQYGFELVKVVDDASDKIEIIGKDIGEMEAGTKTPFAVI CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCEEEE INVSGKTLEDDLEGVLERRVHEIFNYIEGVMHLNQRDSVWIRINKESAEKGLNLIHIGKI EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCEEHHHHH IQDIYKSEFPFIENIDVKLITDADIVKEELEKVKEIYKFRDEKTKNLHEEDVDVFYGCIM HHHHHHCCCCCEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH CQSFAPSHVCIITPDKPALCGGINYLDARAAAKIDPDGPIFAIEKGECLDEEKGIYDSVN HHCCCCCEEEEECCCCCCHHCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHH EVVQDKSQGAIESITLHSVLDRPSTSCGCFEAITFYIPEVDGFGIVDRSFKGETPMGVPF HHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCEECCCCCCCCCCCCH SALAGQCSGGNQVEGFCGISVSYMKSSKFFKADGGWERVVWLPSELKNKVIDGIPEEMIP HHHCCCCCCCCCCCEEECCEEEECCCCCCEECCCCCEEEEECHHHHHHHHHCCCCHHHHH KIATEEDVSSIEELIDFLKKNNHPVAENIGLDMDAEDIEVVETHTEEEEYMGDTEGEEEG CCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHCCCCHHHHCCCCCCCCCC TITVPTMTMPAGFGGLPKDIKIVLKNAVIKAEQIIITRESGKK CEEECEEECCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCC >Mature Secondary Structure MVIKNIIAGGKTVLNLTVDTLKNNKDEDSKKIGFLETNYYLPTIYGILGKKIENIGQLKE CCCHHHHCCCCEEEEEEHHHHCCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHH LINSLEIEDNADATLDDALDAGVKTLICAEALEALKYMDNETPYEAPYTGFIPDKILRDL HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHC GVPLVNGKIPAILVVIGKVGDEEKLKSLINEIRKRNILGLFIGDIVKEMEDANIELGLDK CCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECHHH LLVPVGDSITSAIHAANLAIRAPLIYGGVEGGKTEEVIEYIANRVPAIVIALGEVDDITL HEECCCHHHHHHHHHHHHEEECCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEE AAGAGCIKAGIPVITNNPVPEIEGALGSSDIDNIIENALKMKNIKVEEMSIEDVNIPVSV ECCCCHHHCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEE GPMNEGERVRGPDMFVELAGPKQYGFELVKVVDDASDKIEIIGKDIGEMEAGTKTPFAVI CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCEEEE INVSGKTLEDDLEGVLERRVHEIFNYIEGVMHLNQRDSVWIRINKESAEKGLNLIHIGKI EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCEEHHHHH IQDIYKSEFPFIENIDVKLITDADIVKEELEKVKEIYKFRDEKTKNLHEEDVDVFYGCIM HHHHHHCCCCCEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH CQSFAPSHVCIITPDKPALCGGINYLDARAAAKIDPDGPIFAIEKGECLDEEKGIYDSVN HHCCCCCEEEEECCCCCCHHCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHH EVVQDKSQGAIESITLHSVLDRPSTSCGCFEAITFYIPEVDGFGIVDRSFKGETPMGVPF HHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCEECCCCCCCCCCCCH SALAGQCSGGNQVEGFCGISVSYMKSSKFFKADGGWERVVWLPSELKNKVIDGIPEEMIP HHHCCCCCCCCCCCEEECCEEEECCCCCCEECCCCCEEEEECHHHHHHHHHCCCCHHHHH KIATEEDVSSIEELIDFLKKNNHPVAENIGLDMDAEDIEVVETHTEEEEYMGDTEGEEEG CCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHCCCCHHHHCCCCCCCCCC TITVPTMTMPAGFGGLPKDIKIVLKNAVIKAEQIIITRESGKK CEEECEEECCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CO; H2O; A
Specific reaction: CO + H2O + A = CO2 + AH2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]