Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is yjgR [C]
Identifier: 150401556
GI number: 150401556
Start: 1177489
End: 1178979
Strand: Direct
Name: yjgR [C]
Synonym: Maeo_1133
Alternate gene names: 150401556
Gene position: 1177489-1178979 (Clockwise)
Preceding gene: 150401555
Following gene: 150401563
Centisome position: 75.02
GC content: 30.11
Gene sequence:
>1491_bases ATGAATGAGATATTGGGATATATTATTGGTGAAACCACCAATACAGAATTAAGCTTTTTATCATTGGGTATGCCTGAAAT TGGGGGGTATGTCTTAATAAAATATGAGAATAAAAATATACTGGGAATGGTTGAAAGTGTTGTGCAGGGTTGCCCAGTAT TTGATGAAGTATTAAGCGTAAATGATTTAATAAAATTAAAAAACCTAGAAAATGAAGATTCCTACTATATTATGGGAAAA ATAAAGGTATTGGGAGATATTGAAAATAAAGAAATTCCAAGGGTGCCACCAAAACCAGGAACAGAAGTATATATTGCCGA CGATGATTCATTAAAAAATATGTTTTCAGATGGGCATTTAAAAATAGGCAAATTGATATCAAGAGAGGTTCCCGTATGCC TTGATGTCAATAAATTATGCTCTCGGCACTTGGCAATATTGGCAATTACCGGAATGGGAAAATCAAACACAGTATCGGTG TTATTATCCGAATTAAATAAGTTAAATGGAACCGTTGTAGTTTTTGATGTTCATGGAGAGTATAAAGAAATAAAATCAAA CAACAGCAACAACATATTAAATACTCACAATGTCGAACCACAAATAAATATATTTAATATAAGTAGTAGTGCATTATGTG ATTTAGCGGGAGTAGATGCACAGGCCACAAAACAGCGACCATATATTAATAAGGCAATAAAATCGGTTAAAAAACAATAT AAGGAAGTTGATTTCAATTCTGCGGAAGATTATGTAAATTCAATAATATTTGAATTGGAATCATATATTGAGATTAATAA AAGAGATGCGGAAAGTATTCAAACTGCCATATTTAGATTGGAGGATATGCTTCAATTTAAAAATCACATTATTAGACTAC ATTATAATCCAATAGAGGAAATAAAAGACGGACATATTAACATACTGCCATTAGATGGATTAGATGAAAATGATATGGAT ATTATTATTTCTTACTTTTCAAAAGAGATTTTAAAGAATAGAAAAAAATCATTTAGAAATAATGAACCAAAACCTGTATT TTTAATATTTGAGGAGGCACATTTAATAGTGCCACAAAATAGAAATACAAAATCAAAATATTATATATCCCGAATAGCTC GGGAAGGTAGAAAATTTGGAGTTGGGATATGTCTTGTATCCCAAAGGCCCAAAACTCTTGACCAGGAATCATTATCCCAA TGCAACAATTTAATTATATCTAAATTAATAGAACCTTCTGACCAATCCCATGTTCAACATGCCTCTGAGAATTTAAGTGA AGATTTATTAAAACAATTGCCCAGTTTGAATATTGGAGAGGCTGTGATTATAGGGCCTTGTTTAAAAATTCCTGCAATTG TAAAAATAGATAAATTTGATGGAGAATATAAGGGAGAAGATATTGATATTGTAAATATATGGAAGAACAATTATAATAAT GAAAATAATGAAAAAAGACTTTATTCAGAAGATATGTATGGAGATTTATAG
Upstream 100 bases:
>100_bases GGTAAAGCCGATGGAAAAATTATAAACACCGTGTTAAAAAATAAATTAATGGAAAAGGCAAATAAATAATAAATAATATA TTAAACTTAAAAGGGAAAAT
Downstream 100 bases:
>100_bases TTAATCTTCAATAACTGTCCTTTATTTGTCCTATAGTAAAAATTCCCCTGGAATTTTGAGGTCCCCCCGGGATTCAATAA TCTCTGATTATTACATATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MNEILGYIIGETTNTELSFLSLGMPEIGGYVLIKYENKNILGMVESVVQGCPVFDEVLSVNDLIKLKNLENEDSYYIMGK IKVLGDIENKEIPRVPPKPGTEVYIADDDSLKNMFSDGHLKIGKLISREVPVCLDVNKLCSRHLAILAITGMGKSNTVSV LLSELNKLNGTVVVFDVHGEYKEIKSNNSNNILNTHNVEPQINIFNISSSALCDLAGVDAQATKQRPYINKAIKSVKKQY KEVDFNSAEDYVNSIIFELESYIEINKRDAESIQTAIFRLEDMLQFKNHIIRLHYNPIEEIKDGHINILPLDGLDENDMD IIISYFSKEILKNRKKSFRNNEPKPVFLIFEEAHLIVPQNRNTKSKYYISRIAREGRKFGVGICLVSQRPKTLDQESLSQ CNNLIISKLIEPSDQSHVQHASENLSEDLLKQLPSLNIGEAVIIGPCLKIPAIVKIDKFDGEYKGEDIDIVNIWKNNYNN ENNEKRLYSEDMYGDL
Sequences:
>Translated_496_residues MNEILGYIIGETTNTELSFLSLGMPEIGGYVLIKYENKNILGMVESVVQGCPVFDEVLSVNDLIKLKNLENEDSYYIMGK IKVLGDIENKEIPRVPPKPGTEVYIADDDSLKNMFSDGHLKIGKLISREVPVCLDVNKLCSRHLAILAITGMGKSNTVSV LLSELNKLNGTVVVFDVHGEYKEIKSNNSNNILNTHNVEPQINIFNISSSALCDLAGVDAQATKQRPYINKAIKSVKKQY KEVDFNSAEDYVNSIIFELESYIEINKRDAESIQTAIFRLEDMLQFKNHIIRLHYNPIEEIKDGHINILPLDGLDENDMD IIISYFSKEILKNRKKSFRNNEPKPVFLIFEEAHLIVPQNRNTKSKYYISRIAREGRKFGVGICLVSQRPKTLDQESLSQ CNNLIISKLIEPSDQSHVQHASENLSEDLLKQLPSLNIGEAVIIGPCLKIPAIVKIDKFDGEYKGEDIDIVNIWKNNYNN ENNEKRLYSEDMYGDL >Mature_496_residues MNEILGYIIGETTNTELSFLSLGMPEIGGYVLIKYENKNILGMVESVVQGCPVFDEVLSVNDLIKLKNLENEDSYYIMGK IKVLGDIENKEIPRVPPKPGTEVYIADDDSLKNMFSDGHLKIGKLISREVPVCLDVNKLCSRHLAILAITGMGKSNTVSV LLSELNKLNGTVVVFDVHGEYKEIKSNNSNNILNTHNVEPQINIFNISSSALCDLAGVDAQATKQRPYINKAIKSVKKQY KEVDFNSAEDYVNSIIFELESYIEINKRDAESIQTAIFRLEDMLQFKNHIIRLHYNPIEEIKDGHINILPLDGLDENDMD IIISYFSKEILKNRKKSFRNNEPKPVFLIFEEAHLIVPQNRNTKSKYYISRIAREGRKFGVGICLVSQRPKTLDQESLSQ CNNLIISKLIEPSDQSHVQHASENLSEDLLKQLPSLNIGEAVIIGPCLKIPAIVKIDKFDGEYKGEDIDIVNIWKNNYNN ENNEKRLYSEDMYGDL
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1429 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 56216; Mature: 56216
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEILGYIIGETTNTELSFLSLGMPEIGGYVLIKYENKNILGMVESVVQGCPVFDEVLSV CCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHCH NDLIKLKNLENEDSYYIMGKIKVLGDIENKEIPRVPPKPGTEVYIADDDSLKNMFSDGHL HHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCE KIGKLISREVPVCLDVNKLCSRHLAILAITGMGKSNTVSVLLSELNKLNGTVVVFDVHGE EHHHHHHCCCCEEECHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCC YKEIKSNNSNNILNTHNVEPQINIFNISSSALCDLAGVDAQATKQRPYINKAIKSVKKQY HHHHHCCCCCCCEECCCCCCEEEEEECCCHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHH KEVDFNSAEDYVNSIIFELESYIEINKRDAESIQTAIFRLEDMLQFKNHIIRLHYNPIEE HHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH IKDGHINILPLDGLDENDMDIIISYFSKEILKNRKKSFRNNEPKPVFLIFEEAHLIVPQN HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCC RNTKSKYYISRIAREGRKFGVGICLVSQRPKTLDQESLSQCNNLIISKLIEPSDQSHVQH CCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH ASENLSEDLLKQLPSLNIGEAVIIGPCLKIPAIVKIDKFDGEYKGEDIDIVNIWKNNYNN HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCC ENNEKRLYSEDMYGDL CCCCHHHECCCCCCCC >Mature Secondary Structure MNEILGYIIGETTNTELSFLSLGMPEIGGYVLIKYENKNILGMVESVVQGCPVFDEVLSV CCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHCH NDLIKLKNLENEDSYYIMGKIKVLGDIENKEIPRVPPKPGTEVYIADDDSLKNMFSDGHL HHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCE KIGKLISREVPVCLDVNKLCSRHLAILAITGMGKSNTVSVLLSELNKLNGTVVVFDVHGE EHHHHHHCCCCEEECHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCC YKEIKSNNSNNILNTHNVEPQINIFNISSSALCDLAGVDAQATKQRPYINKAIKSVKKQY HHHHHCCCCCCCEECCCCCCEEEEEECCCHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHH KEVDFNSAEDYVNSIIFELESYIEINKRDAESIQTAIFRLEDMLQFKNHIIRLHYNPIEE HHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH IKDGHINILPLDGLDENDMDIIISYFSKEILKNRKKSFRNNEPKPVFLIFEEAHLIVPQN HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCC RNTKSKYYISRIAREGRKFGVGICLVSQRPKTLDQESLSQCNNLIISKLIEPSDQSHVQH CCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH ASENLSEDLLKQLPSLNIGEAVIIGPCLKIPAIVKIDKFDGEYKGEDIDIVNIWKNNYNN HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCC ENNEKRLYSEDMYGDL CCCCHHHECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]