Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401506
Identifier: 150401506
GI number: 150401506
Start: 1129988
End: 1132504
Strand: Reverse
Name: 150401506
Synonym: Maeo_1083
Alternate gene names: NA
Gene position: 1132504-1129988 (Counterclockwise)
Preceding gene: 150401507
Following gene: 150401505
Centisome position: 72.16
GC content: 26.46
Gene sequence:
>2517_bases ATGGATGAAAATGAATATGAAGCGTTAAAAATTGGTGCATTATTACATGATATTGGAAAATGGTATAAACTTTTAGATAA TGATTCAAGTGAAAATAATGGGTCTAATAACGGTCATGTAGATTATGGGGTTAAATTTATTGGGGGCAAGATAAATTTTA AAGAATACTGGGGTTCAAACAATTCCGAAATTGAAAAAATTAAAACTATAAAATTTTTGATAGAAAACCACCATGGAGAA AATAACGAAAATAAATTATTAAATATATTAAAAATATCGGATAAATTAAGCAATGGAGAATTAATAACATATAATAAAAA TGCGAGCTCTAATGATGATCTAAATTTAGCATCAATTTTTGAAAATATATCTATATCGGAAAATGAAAATAACAAAAAAA CTTCTAATAAAAACTATATATATCCATTAATGCCTTTGAATGTATCTGAAAAATCGTTTCCAAAGATAAATATAGATAAC AATACTAAAAAAGTAGATGACGAAGATTTTAAAAAAATTAATAATTTTGAAGATTTACTGTTATTTATACAGAAATATAC TTGGTGTGTTCCTTCGACATACAATATGGAGAAAAAAGATTCCAATTATTTTTCTGATGTATCATTATATGACCATCTAA AAACCACCTGTGCTATTGCATGTTGTTTGTATAACAATAAAGATAAATTAGATGTTAAAAATCTTTTAGATAATTTAGAC GATGAAGCCAATAAAATAAAAGAAATTATAAATAATTATGAAGTTAAAGAGAAAAATAAAAAAGAAGATAATGAAATATT ATTAAAAGAGAAATTAGATGAAATAAAATATATCAATGAACACAAATTTTCCCTTATTCATGGGGATATTTCGGGAGTTC AGGATTTTATATTTAACATTACTTCAAAAGGAGCTAATAAATCGCTTAAAGGTAGAAGTTTTTATTTAGATTTTTTAACG GAGCTCTGTGCAAGATATGTTGTTAATGAGTTGAATTTACCTATTGCAAATATATTATTTTACGGGGGAGGGCATTTTTA TATATTATCTCACAACATTGAAGATAAAAAAGTGAATGATTTTGAAGAAAAAATAAACGATATATTGTTTGATAAATTCG GTGCAAATTTATATGTGGCAATTGGAAAGGTGAATTTAAGACCTATTGATTTTTTAATAGATTGTATGGATGAGGATGCC AAAATTGGAATACCATATAAATGGAAAGAAGCAGCAGATGAAACTTCAAAGAAGAAAATGAAAAAATTTGAATACAAGGG AATGAAGTTATTTGAAGCAAAAGGAAGCGGAGACGAAAACAAAAGATGTAAAATATGTAAAAGTGAAAATGCTAAAATTA CCAATGAAAAATGCGAATATTGCGAATCTTTTGAAGAATTAACAACAATATTAAGAGATTTTGGAATTGAAAAAAAATTT AGTGTGGAACAAATTAAAGATTTGAAAGTATTGACTGATTTCTTTAAAAATAAAATGGTTGAATTCGAAAATAATATCTA CGAACTACCTGATAATGAGGGCAATCTAAAAATTCCTTATAAATTAGGTTCAATAGCATTTCCAATGGATAACAATAAAA TAAAAGAATTCTCTGAATTAGGAGAAGATGCAGAAAAAAGAACCGGGACAAATAAACTAGCCATTTTAAAGATGGATGTA GATAATTTAGGTAAAATAATTACAAAAGGGTTAAATAAACCAACAATATCAAGATTAAGCACACTGAGCTCTATGCTAAC ATTGTTTTTTACTGGTTATATTCCATATTTAATTAAAACTGGAAAGGCAGAAACTGTTTTTGAAGAAGAAGGTAATGTTG TAAAAAAAGTTGAATATAAAAACAATGTTTATTTAACTTACTCAGGAGGTGATGATACATTAATCGTTGGAGCATGGGAT GTTGTTTGGGATTTGGCAAAAGAGATAAATGATAAGTTTAAAGAATTCGTCTGCAATAATCCAGACATTACATTAAGTGC AGGTGTTGTATTAGTAAGTCCAAAATTTGAATATAGAAAAGGAGTTTATTTAGCAGAAGAAGAATTGGAAAATGCAAAAG AAAATATTATGGAAGTAAATGGAAAAAAGTTGGAAAAAGATTCAGTGAGTATATTTGGATTATCTCTGAATTGGGGTAAA ATTGAGAAGGTAGATGGCTATGAAAATAATTTTATTGAGGCAATGCAAAAACCAGACAAAAAGAGAATAGTTCATTTAGT TCAAAAGACATCTTCAAATTTAAAAAAGGCTGTGAGTAAAAATGTTTCTGAAAATGGAATTCAAATTAATATTCCTTACC TGTGGAGGATGAAATATTATCTGTATAGAAATTACTCTAACAAAAATGGGGAGTTGGATGAAAATGTAGAGTTTATATAT AATTATCTGACAAATATCGAAAATAAAATAAAAAAAGGCAATATTGATGAATTAAAAGAGATTGCCTTTAACGACATGAT AATTGCTTCAAGAATTGCAGAATTAAAATCAAGATAG
Upstream 100 bases:
>100_bases TTAAATTAATAGTTAACCCGATTGCATGATAATATCGGTTTATAACTCTATATCTATATATATTATGAAAGCAATATTAT AAGCATAAATAGGGGATAGA
Downstream 100 bases:
>100_bases TAGGTAGGTGTTTAAAATGAACTGGGCAAATAATCCAAATGTTAAATTTAAAGGAGGAGGTAATTTTATGGGAAATCAGA AAAAAAATCATAATTCAGGT
Product: CRISPR-associated Csm1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 838; Mature: 838
Protein sequence:
>838_residues MDENEYEALKIGALLHDIGKWYKLLDNDSSENNGSNNGHVDYGVKFIGGKINFKEYWGSNNSEIEKIKTIKFLIENHHGE NNENKLLNILKISDKLSNGELITYNKNASSNDDLNLASIFENISISENENNKKTSNKNYIYPLMPLNVSEKSFPKINIDN NTKKVDDEDFKKINNFEDLLLFIQKYTWCVPSTYNMEKKDSNYFSDVSLYDHLKTTCAIACCLYNNKDKLDVKNLLDNLD DEANKIKEIINNYEVKEKNKKEDNEILLKEKLDEIKYINEHKFSLIHGDISGVQDFIFNITSKGANKSLKGRSFYLDFLT ELCARYVVNELNLPIANILFYGGGHFYILSHNIEDKKVNDFEEKINDILFDKFGANLYVAIGKVNLRPIDFLIDCMDEDA KIGIPYKWKEAADETSKKKMKKFEYKGMKLFEAKGSGDENKRCKICKSENAKITNEKCEYCESFEELTTILRDFGIEKKF SVEQIKDLKVLTDFFKNKMVEFENNIYELPDNEGNLKIPYKLGSIAFPMDNNKIKEFSELGEDAEKRTGTNKLAILKMDV DNLGKIITKGLNKPTISRLSTLSSMLTLFFTGYIPYLIKTGKAETVFEEEGNVVKKVEYKNNVYLTYSGGDDTLIVGAWD VVWDLAKEINDKFKEFVCNNPDITLSAGVVLVSPKFEYRKGVYLAEEELENAKENIMEVNGKKLEKDSVSIFGLSLNWGK IEKVDGYENNFIEAMQKPDKKRIVHLVQKTSSNLKKAVSKNVSENGIQINIPYLWRMKYYLYRNYSNKNGELDENVEFIY NYLTNIENKIKKGNIDELKEIAFNDMIIASRIAELKSR
Sequences:
>Translated_838_residues MDENEYEALKIGALLHDIGKWYKLLDNDSSENNGSNNGHVDYGVKFIGGKINFKEYWGSNNSEIEKIKTIKFLIENHHGE NNENKLLNILKISDKLSNGELITYNKNASSNDDLNLASIFENISISENENNKKTSNKNYIYPLMPLNVSEKSFPKINIDN NTKKVDDEDFKKINNFEDLLLFIQKYTWCVPSTYNMEKKDSNYFSDVSLYDHLKTTCAIACCLYNNKDKLDVKNLLDNLD DEANKIKEIINNYEVKEKNKKEDNEILLKEKLDEIKYINEHKFSLIHGDISGVQDFIFNITSKGANKSLKGRSFYLDFLT ELCARYVVNELNLPIANILFYGGGHFYILSHNIEDKKVNDFEEKINDILFDKFGANLYVAIGKVNLRPIDFLIDCMDEDA KIGIPYKWKEAADETSKKKMKKFEYKGMKLFEAKGSGDENKRCKICKSENAKITNEKCEYCESFEELTTILRDFGIEKKF SVEQIKDLKVLTDFFKNKMVEFENNIYELPDNEGNLKIPYKLGSIAFPMDNNKIKEFSELGEDAEKRTGTNKLAILKMDV DNLGKIITKGLNKPTISRLSTLSSMLTLFFTGYIPYLIKTGKAETVFEEEGNVVKKVEYKNNVYLTYSGGDDTLIVGAWD VVWDLAKEINDKFKEFVCNNPDITLSAGVVLVSPKFEYRKGVYLAEEELENAKENIMEVNGKKLEKDSVSIFGLSLNWGK IEKVDGYENNFIEAMQKPDKKRIVHLVQKTSSNLKKAVSKNVSENGIQINIPYLWRMKYYLYRNYSNKNGELDENVEFIY NYLTNIENKIKKGNIDELKEIAFNDMIIASRIAELKSR >Mature_838_residues MDENEYEALKIGALLHDIGKWYKLLDNDSSENNGSNNGHVDYGVKFIGGKINFKEYWGSNNSEIEKIKTIKFLIENHHGE NNENKLLNILKISDKLSNGELITYNKNASSNDDLNLASIFENISISENENNKKTSNKNYIYPLMPLNVSEKSFPKINIDN NTKKVDDEDFKKINNFEDLLLFIQKYTWCVPSTYNMEKKDSNYFSDVSLYDHLKTTCAIACCLYNNKDKLDVKNLLDNLD DEANKIKEIINNYEVKEKNKKEDNEILLKEKLDEIKYINEHKFSLIHGDISGVQDFIFNITSKGANKSLKGRSFYLDFLT ELCARYVVNELNLPIANILFYGGGHFYILSHNIEDKKVNDFEEKINDILFDKFGANLYVAIGKVNLRPIDFLIDCMDEDA KIGIPYKWKEAADETSKKKMKKFEYKGMKLFEAKGSGDENKRCKICKSENAKITNEKCEYCESFEELTTILRDFGIEKKF SVEQIKDLKVLTDFFKNKMVEFENNIYELPDNEGNLKIPYKLGSIAFPMDNNKIKEFSELGEDAEKRTGTNKLAILKMDV DNLGKIITKGLNKPTISRLSTLSSMLTLFFTGYIPYLIKTGKAETVFEEEGNVVKKVEYKNNVYLTYSGGDDTLIVGAWD VVWDLAKEINDKFKEFVCNNPDITLSAGVVLVSPKFEYRKGVYLAEEELENAKENIMEVNGKKLEKDSVSIFGLSLNWGK IEKVDGYENNFIEAMQKPDKKRIVHLVQKTSSNLKKAVSKNVSENGIQINIPYLWRMKYYLYRNYSNKNGELDENVEFIY NYLTNIENKIKKGNIDELKEIAFNDMIIASRIAELKSR
Specific function: Unknown
COG id: COG1353
COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013408 - InterPro: IPR000160 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96620; Mature: 96620
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDENEYEALKIGALLHDIGKWYKLLDNDSSENNGSNNGHVDYGVKFIGGKINFKEYWGSN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEEHHHCCCC NSEIEKIKTIKFLIENHHGENNENKLLNILKISDKLSNGELITYNKNASSNDDLNLASIF CCHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHH ENISISENENNKKTSNKNYIYPLMPLNVSEKSFPKINIDNNTKKVDDEDFKKINNFEDLL HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHCCHHHHH LFIQKYTWCVPSTYNMEKKDSNYFSDVSLYDHLKTTCAIACCLYNNKDKLDVKNLLDNLD HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCC DEANKIKEIINNYEVKEKNKKEDNEILLKEKLDEIKYINEHKFSLIHGDISGVQDFIFNI HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH TSKGANKSLKGRSFYLDFLTELCARYVVNELNLPIANILFYGGGHFYILSHNIEDKKVND HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEEECCCCCCCCCH FEEKINDILFDKFGANLYVAIGKVNLRPIDFLIDCMDEDAKIGIPYKWKEAADETSKKKM HHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHH KKFEYKGMKLFEAKGSGDENKRCKICKSENAKITNEKCEYCESFEELTTILRDFGIEKKF HHHHHCCCEEEECCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCC SVEQIKDLKVLTDFFKNKMVEFENNIYELPDNEGNLKIPYKLGSIAFPMDNNKIKEFSEL CHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCEEECCCCCHHHHHHHH GEDAEKRTGTNKLAILKMDVDNLGKIITKGLNKPTISRLSTLSSMLTLFFTGYIPYLIKT CCHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GKAETVFEEEGNVVKKVEYKNNVYLTYSGGDDTLIVGAWDVVWDLAKEINDKFKEFVCNN CCCCEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCC PDITLSAGVVLVSPKFEYRKGVYLAEEELENAKENIMEVNGKKLEKDSVSIFGLSLNWGK CCEEEECCEEEECCCHHHHCCCEEEHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCC IEKVDGYENNFIEAMQKPDKKRIVHLVQKTSSNLKKAVSKNVSENGIQINIPYLWRMKYY EEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHEEEEEE LYRNYSNKNGELDENVEFIYNYLTNIENKIKKGNIDELKEIAFNDMIIASRIAELKSR EEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDENEYEALKIGALLHDIGKWYKLLDNDSSENNGSNNGHVDYGVKFIGGKINFKEYWGSN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEEHHHCCCC NSEIEKIKTIKFLIENHHGENNENKLLNILKISDKLSNGELITYNKNASSNDDLNLASIF CCHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHH ENISISENENNKKTSNKNYIYPLMPLNVSEKSFPKINIDNNTKKVDDEDFKKINNFEDLL HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHCCHHHHH LFIQKYTWCVPSTYNMEKKDSNYFSDVSLYDHLKTTCAIACCLYNNKDKLDVKNLLDNLD HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCC DEANKIKEIINNYEVKEKNKKEDNEILLKEKLDEIKYINEHKFSLIHGDISGVQDFIFNI HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH TSKGANKSLKGRSFYLDFLTELCARYVVNELNLPIANILFYGGGHFYILSHNIEDKKVND HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEEECCCCCCCCCH FEEKINDILFDKFGANLYVAIGKVNLRPIDFLIDCMDEDAKIGIPYKWKEAADETSKKKM HHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHH KKFEYKGMKLFEAKGSGDENKRCKICKSENAKITNEKCEYCESFEELTTILRDFGIEKKF HHHHHCCCEEEECCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCC SVEQIKDLKVLTDFFKNKMVEFENNIYELPDNEGNLKIPYKLGSIAFPMDNNKIKEFSEL CHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCEEECCCCCHHHHHHHH GEDAEKRTGTNKLAILKMDVDNLGKIITKGLNKPTISRLSTLSSMLTLFFTGYIPYLIKT CCHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GKAETVFEEEGNVVKKVEYKNNVYLTYSGGDDTLIVGAWDVVWDLAKEINDKFKEFVCNN CCCCEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCC PDITLSAGVVLVSPKFEYRKGVYLAEEELENAKENIMEVNGKKLEKDSVSIFGLSLNWGK CCEEEECCEEEECCCHHHHCCCEEEHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCC IEKVDGYENNFIEAMQKPDKKRIVHLVQKTSSNLKKAVSKNVSENGIQINIPYLWRMKYY EEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHEEEEEE LYRNYSNKNGELDENVEFIYNYLTNIENKIKKGNIDELKEIAFNDMIIASRIAELKSR EEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]