Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401496
Identifier: 150401496
GI number: 150401496
Start: 1117354
End: 1119207
Strand: Reverse
Name: 150401496
Synonym: Maeo_1073
Alternate gene names: NA
Gene position: 1119207-1117354 (Counterclockwise)
Preceding gene: 150401500
Following gene: 150401495
Centisome position: 71.31
GC content: 27.13
Gene sequence:
>1854_bases ATGTTATCCAGTGTAGCACAAATTGGAAATTATATAATAAAAAATGAAGGAAAAGATTTGAATAATCCATTATCCATATT GGTCGAAAATCCAAATGTAAAGGGAAATTATAAAGATATATTGAAAATAACTTTTGATTATAATACGATGAATTATTTGG GGGTTAATATTGATGAATTCGATAAAAGTAAAATACTAAAATTAATGTATAAAGCAGGAGCTCCCAACGGTGCCGATTTT TCACCAACTTCTAAAATTACAGAATCTGAAAAAACCCTGAAAAAAAAGATAATCAAAGCGGTGTCCGAAACAATAAATCA TAAAAATTGTAAAGAATCTAATTTACTTAAAAAATTAGAAAAATCCTTAAAAGATAATGAAGATAAAATTTTAAGCGATA TCATCGACAAAAAAGGAAAAGACGGCACTATATTGACCATAACATTTAAAGATGGCGAAAATGAATATTTTGTTGGAGAT ATTGAAGAATTTAGAAATTACTTTATATACAAGGCAACCATGGATTATTATTATATAAAAACTGGTAAAATAACTTCAAG GAGCTCCGGTGTATGTTCAATATGTAATAAAGAAAATGAAGTATATGGGTTGTTTAGAAAATTTGGGTTTTACTCCGTGG ATAAAATTGGAAATGTAAGTGGATTTAATCCAAATGAGGCATGGAAAACCTTTCCAATATGTTTAAAATGTGCATTGGCT GTTGAAGAGGGGAAAAAATATTTGGATGAAAATTTAAGGGATAGATTCTACGGAACAGAATTTTATATGATTCCAAAGGT TTTATTTGAGGGGGATTTAGAAAGAGTATTGGAACGATACAAAGAATTATCATCAAAAGAGAATAAAATTAATGGGAAGT ATTCAAAAGAGGAAAAAAGATTATTTAGCGTTTTAAAAAACAACGACATTTACTGTTATACAACATTTATGTTTTTTAAT GAAGGTAATGATTTCAAAGTTCTTCAAATGATTGAGGATGTTCTTCCTTCAAGATTTAGTATATTATATAAGGCCATGGA AAAAACTGAAAACATTCCATTATTTAAAAACTATAAAGTAAATGTTAATTTAAAAAAATTAAATAAAAATCAGCGAGATT ATTTCGTTTCAATATTCAAAAATAGCGAGGATTTGGAAGAGTTAAGGTTTTTATTGGGATATATCAAAGAATTTGTTGAT AACGATAATGAAATATTTTTAAAACTGATAAACAGCATATTTTCAAATGAAAAAATCGATTATCATTACATAATTAACCA ATTTATCTCAAAAATACGGCGAGAATTTAAAAACAGTGAATCCATCAGTTTATCCACCTATAAATCATTTATGATTATCT ACTTCCTAATTAATACAAATCTATTAAATATTGACTTAAAACCGAGGGGTGATATTATTTTAGAAAAATCATCATACGAT TACAGTGAAATAGATAAGTTTTTTGAAGATTATGAGGAGTTTTTCAACAGTGAGGATAAAAAGGCAGTGTTTTTAACTGG TGTGTTGGTTAATAAACTTTTAAATCTTCAAGCCCATAAACGACAGTCAAAGCCGTTTTTAGCAAAACTTCAAGGTTTAA AATTGGATAAATCCAAAGTTGAAAACATATTCAAGGAGGCAAGTCAAAAATTAATGGAATATGGGCAGGAAGATGGTATT AATTATTATTCTCCCCTAAAAAAAGAAATTGCACTTAAATATATAAATTCAGGAAGTAATTGGAATTTGTCAAACAATGA AATATCCTACATATTTTCATTAGGTATGTCCCTAAGCTCCGTTTTTGATAACTTAAAAAATAATAAAAACAATGAGGGTG AAAAAAATGAGTAA
Upstream 100 bases:
>100_bases AAATAAAAAATTTATATAACAAAAAATTTATATACTATATTAATATAATTATTACTATATTTATATGTTAATATTTATTT ACTGTATTAATGGGGGGAGT
Downstream 100 bases:
>100_bases TACTGAATCAAACGCCATAAATAGAAGTGAATTAATATTTTTATACGATGCCCAATACATAAATCCAAATGGAGACCCGT TGGACGATAACAAACCAAGG
Product: CRISPR-associated Csh1 family protein
Products: NA
Alternate protein names: CRISPR-Associated Csh1 Family Protein; CRISPR-Associated Protein Csh1 Family; Crispr-Associated Protein Csh1 Family; Crispr-Associated Protein Family
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MLSSVAQIGNYIIKNEGKDLNNPLSILVENPNVKGNYKDILKITFDYNTMNYLGVNIDEFDKSKILKLMYKAGAPNGADF SPTSKITESEKTLKKKIIKAVSETINHKNCKESNLLKKLEKSLKDNEDKILSDIIDKKGKDGTILTITFKDGENEYFVGD IEEFRNYFIYKATMDYYYIKTGKITSRSSGVCSICNKENEVYGLFRKFGFYSVDKIGNVSGFNPNEAWKTFPICLKCALA VEEGKKYLDENLRDRFYGTEFYMIPKVLFEGDLERVLERYKELSSKENKINGKYSKEEKRLFSVLKNNDIYCYTTFMFFN EGNDFKVLQMIEDVLPSRFSILYKAMEKTENIPLFKNYKVNVNLKKLNKNQRDYFVSIFKNSEDLEELRFLLGYIKEFVD NDNEIFLKLINSIFSNEKIDYHYIINQFISKIRREFKNSESISLSTYKSFMIIYFLINTNLLNIDLKPRGDIILEKSSYD YSEIDKFFEDYEEFFNSEDKKAVFLTGVLVNKLLNLQAHKRQSKPFLAKLQGLKLDKSKVENIFKEASQKLMEYGQEDGI NYYSPLKKEIALKYINSGSNWNLSNNEISYIFSLGMSLSSVFDNLKNNKNNEGEKNE
Sequences:
>Translated_617_residues MLSSVAQIGNYIIKNEGKDLNNPLSILVENPNVKGNYKDILKITFDYNTMNYLGVNIDEFDKSKILKLMYKAGAPNGADF SPTSKITESEKTLKKKIIKAVSETINHKNCKESNLLKKLEKSLKDNEDKILSDIIDKKGKDGTILTITFKDGENEYFVGD IEEFRNYFIYKATMDYYYIKTGKITSRSSGVCSICNKENEVYGLFRKFGFYSVDKIGNVSGFNPNEAWKTFPICLKCALA VEEGKKYLDENLRDRFYGTEFYMIPKVLFEGDLERVLERYKELSSKENKINGKYSKEEKRLFSVLKNNDIYCYTTFMFFN EGNDFKVLQMIEDVLPSRFSILYKAMEKTENIPLFKNYKVNVNLKKLNKNQRDYFVSIFKNSEDLEELRFLLGYIKEFVD NDNEIFLKLINSIFSNEKIDYHYIINQFISKIRREFKNSESISLSTYKSFMIIYFLINTNLLNIDLKPRGDIILEKSSYD YSEIDKFFEDYEEFFNSEDKKAVFLTGVLVNKLLNLQAHKRQSKPFLAKLQGLKLDKSKVENIFKEASQKLMEYGQEDGI NYYSPLKKEIALKYINSGSNWNLSNNEISYIFSLGMSLSSVFDNLKNNKNNEGEKNE >Mature_617_residues MLSSVAQIGNYIIKNEGKDLNNPLSILVENPNVKGNYKDILKITFDYNTMNYLGVNIDEFDKSKILKLMYKAGAPNGADF SPTSKITESEKTLKKKIIKAVSETINHKNCKESNLLKKLEKSLKDNEDKILSDIIDKKGKDGTILTITFKDGENEYFVGD IEEFRNYFIYKATMDYYYIKTGKITSRSSGVCSICNKENEVYGLFRKFGFYSVDKIGNVSGFNPNEAWKTFPICLKCALA VEEGKKYLDENLRDRFYGTEFYMIPKVLFEGDLERVLERYKELSSKENKINGKYSKEEKRLFSVLKNNDIYCYTTFMFFN EGNDFKVLQMIEDVLPSRFSILYKAMEKTENIPLFKNYKVNVNLKKLNKNQRDYFVSIFKNSEDLEELRFLLGYIKEFVD NDNEIFLKLINSIFSNEKIDYHYIINQFISKIRREFKNSESISLSTYKSFMIIYFLINTNLLNIDLKPRGDIILEKSSYD YSEIDKFFEDYEEFFNSEDKKAVFLTGVLVNKLLNLQAHKRQSKPFLAKLQGLKLDKSKVENIFKEASQKLMEYGQEDGI NYYSPLKKEIALKYINSGSNWNLSNNEISYIFSLGMSLSSVFDNLKNNKNNEGEKNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71966; Mature: 71966
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSVAQIGNYIIKNEGKDLNNPLSILVENPNVKGNYKDILKITFDYNTMNYLGVNIDEF CCCCHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCHHHH DKSKILKLMYKAGAPNGADFSPTSKITESEKTLKKKIIKAVSETINHKNCKESNLLKKLE HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KSLKDNEDKILSDIIDKKGKDGTILTITFKDGENEYFVGDIEEFRNYFIYKATMDYYYIK HHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEECCHHHHCCEEEEEEEEEEEEEE TGKITSRSSGVCSICNKENEVYGLFRKFGFYSVDKIGNVSGFNPNEAWKTFPICLKCALA ECCEECCCCCCEEECCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH VEEGKKYLDENLRDRFYGTEFYMIPKVLFEGDLERVLERYKELSSKENKINGKYSKEEKR HHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH LFSVLKNNDIYCYTTFMFFNEGNDFKVLQMIEDVLPSRFSILYKAMEKTENIPLFKNYKV HHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEE NVNLKKLNKNQRDYFVSIFKNSEDLEELRFLLGYIKEFVDNDNEIFLKLINSIFSNEKID EEEHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH YHYIINQFISKIRREFKNSESISLSTYKSFMIIYFLINTNLLNIDLKPRGDIILEKSSYD HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHEEEECCCEEEEEECCCCCEEEECCCCC YSEIDKFFEDYEEFFNSEDKKAVFLTGVLVNKLLNLQAHKRQSKPFLAKLQGLKLDKSKV HHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHH ENIFKEASQKLMEYGQEDGINYYSPLKKEIALKYINSGSNWNLSNNEISYIFSLGMSLSS HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VFDNLKNNKNNEGEKNE HHHHHHCCCCCCCCCCC >Mature Secondary Structure MLSSVAQIGNYIIKNEGKDLNNPLSILVENPNVKGNYKDILKITFDYNTMNYLGVNIDEF CCCCHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCHHHH DKSKILKLMYKAGAPNGADFSPTSKITESEKTLKKKIIKAVSETINHKNCKESNLLKKLE HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KSLKDNEDKILSDIIDKKGKDGTILTITFKDGENEYFVGDIEEFRNYFIYKATMDYYYIK HHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEECCHHHHCCEEEEEEEEEEEEEE TGKITSRSSGVCSICNKENEVYGLFRKFGFYSVDKIGNVSGFNPNEAWKTFPICLKCALA ECCEECCCCCCEEECCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH VEEGKKYLDENLRDRFYGTEFYMIPKVLFEGDLERVLERYKELSSKENKINGKYSKEEKR HHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH LFSVLKNNDIYCYTTFMFFNEGNDFKVLQMIEDVLPSRFSILYKAMEKTENIPLFKNYKV HHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEE NVNLKKLNKNQRDYFVSIFKNSEDLEELRFLLGYIKEFVDNDNEIFLKLINSIFSNEKID EEEHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH YHYIINQFISKIRREFKNSESISLSTYKSFMIIYFLINTNLLNIDLKPRGDIILEKSSYD HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHEEEECCCEEEEEECCCCCEEEECCCCC YSEIDKFFEDYEEFFNSEDKKAVFLTGVLVNKLLNLQAHKRQSKPFLAKLQGLKLDKSKV HHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHH ENIFKEASQKLMEYGQEDGINYYSPLKKEIALKYINSGSNWNLSNNEISYIFSLGMSLSS HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VFDNLKNNKNNEGEKNE HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA