Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401475
Identifier: 150401475
GI number: 150401475
Start: 1085757
End: 1087334
Strand: Reverse
Name: 150401475
Synonym: Maeo_1051
Alternate gene names: NA
Gene position: 1087334-1085757 (Counterclockwise)
Preceding gene: 150401485
Following gene: 150401472
Centisome position: 69.28
GC content: 28.33
Gene sequence:
>1578_bases ATGATTTTGGGATTAACCGACGGACATAATTCTAGTGCCTGTTTAATTGATAACACCAATAATTTAAAATATGCCGTAGG CGAAGAAAGATTTACAAGGAAAAAAAATCAAAGGGGAGCTCCCATAAATTCAATAAATTACATAATCAACAGCATAAATA ATAACACAGAAAACACGGACACAGACAAAAAACCAGAAATAATAACAGTAGGGGGCATGTTTAGAAAAGGAAAACGATTA AAAGAATTAAAGGAGATACAAAATAAATTAAATATTCCTATGCTGTATTTTAATCACCATTTATGCCATGCATCATTGTA TAAATTATCAAATTTTAAAAATAAGGAATGTTTAATTATTACTATGGATGGGGGGGGAGATGGATTTTCCTCAACGGTAT CAATTGGAAGTAATAAAGGAATAGAACCAATAGCACAAAGTGATTTAATTGATTCTATGGGGGATTTTTATGCCTCTATT ACGGAAGTATTGGGATTTAAGCCGATGGAGGATGAAGGAAAGGTAATGAGTTTATCTACCTATGATACCAACCTAAATAT TGATTTAAATAATTTAAAAATAATAGAATACAATAAAAAAATCAAAACGATTAATAATTATTTGGGTGTTGTGGGATTTG AGGCTACAAAAGCACTGAAAAAGATATTTAATTTAGAAAATATCAATATAAATGAGTTTAATGGTAAAATATTGATTTCA AAATATGCCCAAAAAACATTGGAAAGCGAAGTTTTAAAACTAATAAATGAGTTTTCAAATGAAACAGGCATAAAAAATAT AGTTTTTAGCGGTGGAGTTGCCCAAAATGTTCAATTGAATAAAAAAATAATGGAAAATTATAATTTATTTGTTCCTCCGT TTATGGGGGACGAGGGGCTTTCTGTTGGTGCATCATTGTTATTTAATAAAAAATTTGTAGATTTAAAAACCACATATTTA GGATACGATATAAAAAATGAAAATATAATTAATATTGTTGAAAAAATAAAGTTAAATGAAAATCAATATAAAATTAAATA CATTGAGGAAAAAGAAATTCCTGAAACAATAGGCAATTTATTAATAAGTAATAAAATTATATGTATTTGTAGAAATAAAA TGGAGTTTGGAGCTCGGGCACTTGGAAATAGAAGTATATTGGCACTACCTAAAAAGGAAAATGCAAAAAAGATTAATAAA ATGCTTAATAGGGATAGTTTTATGCCTTTTGCTCCAACTATGCTATATGATTATGTTGAGGAATATTTTAAAAATCCGCA CTACAATCCGTTTATGACTACTTTATTTGATGTAAAAAAAGAATATATTAATAAAATAGATGGAGTGGTGCATAATGATG ACACCACTAGGGCTCAAACTCTGAAAAAGGAATTTAATCCAACCTACTATAATATCATTGATTATGTGAATGGCGTTGTT AATGTCCCATTTGTTTTAAATACAAGTTTTAATTTACACGGCGAACCCATTGTTTGCAATGAACAAGATGCTTTAAAGTC CTTTAAATCTGTTGGTGATGCTTTGTTGTTGGGGAATTATTTATTTATGAAGATTTAA
Upstream 100 bases:
>100_bases TACATATTGCTTAATGTTAAATGTATAATTTATAATAAAATATATGATATAAACCTAATTAATATTATATATTTAATTAC CTATTTAATGAGGATTATTT
Downstream 100 bases:
>100_bases TATTGGGATATTTTAGGGGAATTATGGGGGAGCTCCGAGGTCTGCAATACTCCCGTAGTCTGCAATAAATACAATGTTTA AAAATTATTTTCTGCTCAAT
Product: carbamoyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MILGLTDGHNSSACLIDNTNNLKYAVGEERFTRKKNQRGAPINSINYIINSINNNTENTDTDKKPEIITVGGMFRKGKRL KELKEIQNKLNIPMLYFNHHLCHASLYKLSNFKNKECLIITMDGGGDGFSSTVSIGSNKGIEPIAQSDLIDSMGDFYASI TEVLGFKPMEDEGKVMSLSTYDTNLNIDLNNLKIIEYNKKIKTINNYLGVVGFEATKALKKIFNLENININEFNGKILIS KYAQKTLESEVLKLINEFSNETGIKNIVFSGGVAQNVQLNKKIMENYNLFVPPFMGDEGLSVGASLLFNKKFVDLKTTYL GYDIKNENIINIVEKIKLNENQYKIKYIEEKEIPETIGNLLISNKIICICRNKMEFGARALGNRSILALPKKENAKKINK MLNRDSFMPFAPTMLYDYVEEYFKNPHYNPFMTTLFDVKKEYINKIDGVVHNDDTTRAQTLKKEFNPTYYNIIDYVNGVV NVPFVLNTSFNLHGEPIVCNEQDALKSFKSVGDALLLGNYLFMKI
Sequences:
>Translated_525_residues MILGLTDGHNSSACLIDNTNNLKYAVGEERFTRKKNQRGAPINSINYIINSINNNTENTDTDKKPEIITVGGMFRKGKRL KELKEIQNKLNIPMLYFNHHLCHASLYKLSNFKNKECLIITMDGGGDGFSSTVSIGSNKGIEPIAQSDLIDSMGDFYASI TEVLGFKPMEDEGKVMSLSTYDTNLNIDLNNLKIIEYNKKIKTINNYLGVVGFEATKALKKIFNLENININEFNGKILIS KYAQKTLESEVLKLINEFSNETGIKNIVFSGGVAQNVQLNKKIMENYNLFVPPFMGDEGLSVGASLLFNKKFVDLKTTYL GYDIKNENIINIVEKIKLNENQYKIKYIEEKEIPETIGNLLISNKIICICRNKMEFGARALGNRSILALPKKENAKKINK MLNRDSFMPFAPTMLYDYVEEYFKNPHYNPFMTTLFDVKKEYINKIDGVVHNDDTTRAQTLKKEFNPTYYNIIDYVNGVV NVPFVLNTSFNLHGEPIVCNEQDALKSFKSVGDALLLGNYLFMKI >Mature_525_residues MILGLTDGHNSSACLIDNTNNLKYAVGEERFTRKKNQRGAPINSINYIINSINNNTENTDTDKKPEIITVGGMFRKGKRL KELKEIQNKLNIPMLYFNHHLCHASLYKLSNFKNKECLIITMDGGGDGFSSTVSIGSNKGIEPIAQSDLIDSMGDFYASI TEVLGFKPMEDEGKVMSLSTYDTNLNIDLNNLKIIEYNKKIKTINNYLGVVGFEATKALKKIFNLENININEFNGKILIS KYAQKTLESEVLKLINEFSNETGIKNIVFSGGVAQNVQLNKKIMENYNLFVPPFMGDEGLSVGASLLFNKKFVDLKTTYL GYDIKNENIINIVEKIKLNENQYKIKYIEEKEIPETIGNLLISNKIICICRNKMEFGARALGNRSILALPKKENAKKINK MLNRDSFMPFAPTMLYDYVEEYFKNPHYNPFMTTLFDVKKEYINKIDGVVHNDDTTRAQTLKKEFNPTYYNIIDYVNGVV NVPFVLNTSFNLHGEPIVCNEQDALKSFKSVGDALLLGNYLFMKI
Specific function: Unknown
COG id: COG2192
COG function: function code O; Predicted carbamoyl transferase, NodU family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 59586; Mature: 59586
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILGLTDGHNSSACLIDNTNNLKYAVGEERFTRKKNQRGAPINSINYIINSINNNTENTD CEEEECCCCCCCEEEEECCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC TDKKPEIITVGGMFRKGKRLKELKEIQNKLNIPMLYFNHHLCHASLYKLSNFKNKECLII CCCCCCEEEECCHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCEEEE TMDGGGDGFSSTVSIGSNKGIEPIAQSDLIDSMGDFYASITEVLGFKPMEDEGKVMSLST EECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE YDTNLNIDLNNLKIIEYNKKIKTINNYLGVVGFEATKALKKIFNLENININEFNGKILIS ECCEEEEEECCEEEEEECCHHHHHHHHHHEECHHHHHHHHHHHCCCCCCEECCCCEEEEH KYAQKTLESEVLKLINEFSNETGIKNIVFSGGVAQNVQLNKKIMENYNLFVPPFMGDEGL HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHCCCEEECCCCCCCCC SVGASLLFNKKFVDLKTTYLGYDIKNENIINIVEKIKLNENQYKIKYIEEKEIPETIGNL HHHHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHH LISNKIICICRNKMEFGARALGNRSILALPKKENAKKINKMLNRDSFMPFAPTMLYDYVE HHCCCEEEEECCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH EYFKNPHYNPFMTTLFDVKKEYINKIDGVVHNDDTTRAQTLKKEFNPTYYNIIDYVNGVV HHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCE NVPFVLNTSFNLHGEPIVCNEQDALKSFKSVGDALLLGNYLFMKI ECCEEEECCCCCCCCEEEECCHHHHHHHHHHCCHHHHCCEEEEEC >Mature Secondary Structure MILGLTDGHNSSACLIDNTNNLKYAVGEERFTRKKNQRGAPINSINYIINSINNNTENTD CEEEECCCCCCCEEEEECCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC TDKKPEIITVGGMFRKGKRLKELKEIQNKLNIPMLYFNHHLCHASLYKLSNFKNKECLII CCCCCCEEEECCHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCEEEE TMDGGGDGFSSTVSIGSNKGIEPIAQSDLIDSMGDFYASITEVLGFKPMEDEGKVMSLST EECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE YDTNLNIDLNNLKIIEYNKKIKTINNYLGVVGFEATKALKKIFNLENININEFNGKILIS ECCEEEEEECCEEEEEECCHHHHHHHHHHEECHHHHHHHHHHHCCCCCCEECCCCEEEEH KYAQKTLESEVLKLINEFSNETGIKNIVFSGGVAQNVQLNKKIMENYNLFVPPFMGDEGL HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHCCCEEECCCCCCCCC SVGASLLFNKKFVDLKTTYLGYDIKNENIINIVEKIKLNENQYKIKYIEEKEIPETIGNL HHHHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHH LISNKIICICRNKMEFGARALGNRSILALPKKENAKKINKMLNRDSFMPFAPTMLYDYVE HHCCCEEEEECCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH EYFKNPHYNPFMTTLFDVKKEYINKIDGVVHNDDTTRAQTLKKEFNPTYYNIIDYVNGVV HHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCE NVPFVLNTSFNLHGEPIVCNEQDALKSFKSVGDALLLGNYLFMKI ECCEEEECCCCCCCCEEEECCHHHHHHHHHHCCHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]