| Definition | Staphylococcus aureus subsp. aureus JH1, complete genome. |
|---|---|
| Accession | NC_009632 |
| Length | 2,906,507 |
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The map label for this gene is 150392930
Identifier: 150392930
GI number: 150392930
Start: 478385
End: 479455
Strand: Direct
Name: 150392930
Synonym: SaurJH1_0459
Alternate gene names: NA
Gene position: 478385-479455 (Clockwise)
Preceding gene: 150392929
Following gene: 150392931
Centisome position: 16.46
GC content: 34.55
Gene sequence:
>1071_bases ATGAATATGAAAACAATTGCTAAAACCAGTTTAGCACTAGGGCTTTTAACAACAGGCGCAATTACAGTAACGACGCAATC GGTCAAAGCAGAAAAAATACAATCAACTAAAGTTGACAAAGTACCAACGCTTAAAGCAGAGCGATTAGCAATGATAAACA TAACAGCAGGTGCAAATTCAGCGACAACACAAGCAGCTAACACAAGACAAGAACGCACGCCTAAACTCGAAAAGGCACCA AATACTAATGAGGAAAAAACCTCAGCTTCCAAAATAGAAAAAATATCACAACCTAAACAAGAAGAGCAGAAATCGCTTAA TATATCAGCAATGCCAGCGCCTAAACAAGAACAATCACAAACGACAACCGAATCCACAACGCCGAAAACTAAAGTGACAA CACCTCCATCAACAAACACGCCACAACCAATGCAATCTACTAAATCAGACACACCACAATCTCCAACCATAAAACAAGCA CAAACAGATATGACTCCTAAATATGAAGATTTAAGAGCGTATTACACGAAACCGAGTTTTGAATTTGAAAAGCAGTTTGG ATTTTTGCTCAAACCATGGACGACGGTTAGGTTTATGAATGTTATTCCAAATAGGTTCATCTATAAAATAGCTTTAGTTG GAAAAGATGAGAAAAAATATAAAGATGGACCTTACGATAATATCGATGTATTTATCGTTTTAGAAGACAATAAATATCAA TTAAAAAAATATTCTGTCGGTGGCATCACGAAGACTAATAGTAAAAAAGTTGATCACAAAGCAGAATTAAGCGTTACTAA AAAAGATAATCAAGGTATGATTTCACGCGATGTTTCAGAATACATGATTACTAAGGAAGAGATTTCCTTGAAAGAGCTTG ATTTTAAATTGAGAAAACAACTTATTGAAAAACATAATCTTTACGGTAACATGGGTTCAGGAACAATCGTTATTAAAATG AAAAACGGTGGGAAGTATACGTTTGAATTACACAAAAAACTGCAAGAGCATCGTATGGCAGATGTCATAGAAGGTACAAA CATTGATAAAATTGAAGTGAATATAAAATAA
Upstream 100 bases:
>100_bases GTTTAATGTGATTATCTTAGAACGCCATCTATAATGATGTTGTATGATTCAAATTACGTAAAAAGACAATCGAATATAAT ATAGATTGGAGTATACAATT
Downstream 100 bases:
>100_bases TCATGACGTTCTCTAAATAGAAGCTGACATCGGTAAAACAAGAAGTTAAGTGACAACGGTTTACATGTTGCTTAGCTTCT TTTATTATGCGTAATGATGT
Product: superantigen-like protein
Products: NA
Alternate protein names: Exotoxin; Superantigen-Like; Exotoxin-Like Protein
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MNMKTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERTPKLEKAP NTNEEKTSASKIEKISQPKQEEQKSLNISAMPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQA QTDMTPKYEDLRAYYTKPSFEFEKQFGFLLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ LKKYSVGGITKTNSKKVDHKAELSVTKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVIKM KNGGKYTFELHKKLQEHRMADVIEGTNIDKIEVNIK
Sequences:
>Translated_356_residues MNMKTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERTPKLEKAP NTNEEKTSASKIEKISQPKQEEQKSLNISAMPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQA QTDMTPKYEDLRAYYTKPSFEFEKQFGFLLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ LKKYSVGGITKTNSKKVDHKAELSVTKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVIKM KNGGKYTFELHKKLQEHRMADVIEGTNIDKIEVNIK >Mature_356_residues MNMKTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERTPKLEKAP NTNEEKTSASKIEKISQPKQEEQKSLNISAMPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQA QTDMTPKYEDLRAYYTKPSFEFEKQFGFLLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ LKKYSVGGITKTNSKKVDHKAELSVTKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVIKM KNGGKYTFELHKKLQEHRMADVIEGTNIDKIEVNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40125; Mature: 40125
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS00278 STAPH_STREP_TOXIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANS CCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCC ATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISAMPAPKQEQSQ CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCHHHHC TTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSF CCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCC EFEKQFGFLLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ CHHHHCCCEECCHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCCCEEEEEEEECCCEE LKKYSVGGITKTNSKKVDHKAELSVTKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQ EEEEECCCEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH LIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKLQEHRMADVIEGTNIDKIEVNIK HHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure MNMKTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANS CCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCC ATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISAMPAPKQEQSQ CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCHHHHC TTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSF CCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCC EFEKQFGFLLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ CHHHHCCCEECCHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCCCEEEEEEEECCCEE LKKYSVGGITKTNSKKVDHKAELSVTKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQ EEEEECCCEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH LIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKLQEHRMADVIEGTNIDKIEVNIK HHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA