Definition | Staphylococcus aureus subsp. aureus JH1, complete genome. |
---|---|
Accession | NC_009632 |
Length | 2,906,507 |
Click here to switch to the map view.
The map label for this gene is recT [C]
Identifier: 150392803
GI number: 150392803
Start: 369954
End: 370874
Strand: Direct
Name: recT [C]
Synonym: SaurJH1_0329
Alternate gene names: 150392803
Gene position: 369954-370874 (Clockwise)
Preceding gene: 150392802
Following gene: 150392804
Centisome position: 12.73
GC content: 34.53
Gene sequence:
>921_bases ATGACGAATGAATTACTATTAAAAAACAATAAAATGGGCGACAACGTTCTATCTAGAGTTAAGACATTAGAAGCACAAGG AGATTTACAGTTTCCTGCAAACTATTCGCCTGAGAATGCAATGAAGTCAGCAATGTTACAACTGCAAGAATTAAAAGGAT CTAAAAAAGATGGTTATAAACCAGCGCTGGAATTTGCAACTTCAACCAGCATAGCAAACGCCTTAATGGACATGGTTGTA CAAGGTTTAAATCCTGCTAAGAATCAAGGCTATTTCATTATGTATGGCGATAAGGTTCAATTCCAAAGAAGTTACCACGG AACAATGGCAGTAACTAAACGTGTAGCAGGCGCAGAAGAAATTAATGCAGAAGTCATATTTGAAGGTGACGAAGTTAAGT ATAAAACTAAAAACGGAAAAATTGTTGAACTTGAACATACACAGTCTTTTGGTAACAGAAACACACAAAACATTATCGGT GCATATGCAACAGTTGTATTTAAAGATGAAAGTAGAAATTACACTGAAATCATGACATTTGAAGAGATTGAAGAAGCGTG GAAGCAATCACAAATGGTTTATAACGGTGTATTTAAAGAAGACGGTACACACAGAAGATTCCCTCAAGAAATGGCTAAAA AGACTGTAATAAACCGTGCATGTAAAAAGATTTTAAACAGCACGGATGACGCTAGTCTTTTATCAAATCAAATTAAAGAA TCTGAACAACGTCAACGCAAAGAAGTATTGGATGCAGAAGTTGAAGAAAATGCAAATCAAGAACAATTGGATTTTGAACC ACCAGTTTTTGAAGAAGCACAATACACAGAATTAGAAAATGAAAAACCTATTGATGTATCTGACTTTGAAGAAATAAAAG AACCTGCAAAAGAAAAAGAAAGCGAAGAAGAGCCATTTTAA
Upstream 100 bases:
>100_bases AATGCTGAATCAGTAACAGAGCTTATCAAAACAGAATCACAACAAATTCAATTGATAGTAAATGAACAAGATAAAAAATT AAGAATGGAGACTATATAAA
Downstream 100 bases:
>100_bases TTGAAACAATAGCAACTGGTTCAAGTGGTAACTGCTACGTCTTAAATGATGGACGTACTACGTTACTGCTTGAGGCAGGA ATAAAATTTGAACGTGTTCA
Product: RecT protein
Products: NA
Alternate protein names: RecT Family Protein; Prophage Lp1 Protein; Rect Protein; Phage-Like Protein; Recombination Protein RecT
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTNELLLKNNKMGDNVLSRVKTLEAQGDLQFPANYSPENAMKSAMLQLQELKGSKKDGYKPALEFATSTSIANALMDMVV QGLNPAKNQGYFIMYGDKVQFQRSYHGTMAVTKRVAGAEEINAEVIFEGDEVKYKTKNGKIVELEHTQSFGNRNTQNIIG AYATVVFKDESRNYTEIMTFEEIEEAWKQSQMVYNGVFKEDGTHRRFPQEMAKKTVINRACKKILNSTDDASLLSNQIKE SEQRQRKEVLDAEVEENANQEQLDFEPPVFEEAQYTELENEKPIDVSDFEEIKEPAKEKESEEEPF
Sequences:
>Translated_306_residues MTNELLLKNNKMGDNVLSRVKTLEAQGDLQFPANYSPENAMKSAMLQLQELKGSKKDGYKPALEFATSTSIANALMDMVV QGLNPAKNQGYFIMYGDKVQFQRSYHGTMAVTKRVAGAEEINAEVIFEGDEVKYKTKNGKIVELEHTQSFGNRNTQNIIG AYATVVFKDESRNYTEIMTFEEIEEAWKQSQMVYNGVFKEDGTHRRFPQEMAKKTVINRACKKILNSTDDASLLSNQIKE SEQRQRKEVLDAEVEENANQEQLDFEPPVFEEAQYTELENEKPIDVSDFEEIKEPAKEKESEEEPF >Mature_305_residues TNELLLKNNKMGDNVLSRVKTLEAQGDLQFPANYSPENAMKSAMLQLQELKGSKKDGYKPALEFATSTSIANALMDMVVQ GLNPAKNQGYFIMYGDKVQFQRSYHGTMAVTKRVAGAEEINAEVIFEGDEVKYKTKNGKIVELEHTQSFGNRNTQNIIGA YATVVFKDESRNYTEIMTFEEIEEAWKQSQMVYNGVFKEDGTHRRFPQEMAKKTVINRACKKILNSTDDASLLSNQIKES EQRQRKEVLDAEVEENANQEQLDFEPPVFEEAQYTELENEKPIDVSDFEEIKEPAKEKESEEEPF
Specific function: Binds To Single-Stranded DNA And Also Promotes The Renaturation Of Complementary Single-Stranded DNA. Function In Recombination. Has A Function Similar To That Of Lambda Redb. [C]
COG id: COG3723
COG function: function code L; Recombinational DNA repair protein (RecE pathway)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34945; Mature: 34814
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNELLLKNNKMGDNVLSRVKTLEAQGDLQFPANYSPENAMKSAMLQLQELKGSKKDGYK CCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC PALEFATSTSIANALMDMVVQGLNPAKNQGYFIMYGDKVQFQRSYHGTMAVTKRVAGAEE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEHHHHCHHHHHHHHHCCHHH INAEVIFEGDEVKYKTKNGKIVELEHTQSFGNRNTQNIIGAYATVVFKDESRNYTEIMTF CCCEEEEECCCEEEEECCCCEEEEECCHHCCCCCHHHHHHHHEEEEEECCCCCHHHHHHH EEIEEAWKQSQMVYNGVFKEDGTHRRFPQEMAKKTVINRACKKILNSTDDASLLSNQIKE HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SEQRQRKEVLDAEVEENANQEQLDFEPPVFEEAQYTELENEKPIDVSDFEEIKEPAKEKE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCC SEEEPF CCCCCC >Mature Secondary Structure TNELLLKNNKMGDNVLSRVKTLEAQGDLQFPANYSPENAMKSAMLQLQELKGSKKDGYK CCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC PALEFATSTSIANALMDMVVQGLNPAKNQGYFIMYGDKVQFQRSYHGTMAVTKRVAGAEE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEHHHHCHHHHHHHHHCCHHH INAEVIFEGDEVKYKTKNGKIVELEHTQSFGNRNTQNIIGAYATVVFKDESRNYTEIMTF CCCEEEEECCCEEEEECCCCEEEEECCHHCCCCCHHHHHHHHEEEEEECCCCCHHHHHHH EEIEEAWKQSQMVYNGVFKEDGTHRRFPQEMAKKTVINRACKKILNSTDDASLLSNQIKE HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SEQRQRKEVLDAEVEENANQEQLDFEPPVFEEAQYTELENEKPIDVSDFEEIKEPAKEKE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCC SEEEPF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA