Definition | Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence. |
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Accession | NC_009620 |
Length | 1,570,951 |
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Identifier: 150377120
GI number:
Start: 1518056
End: 1520416
Strand: Direct
Name: Not Available
Synonym: Smed_5002
Alternate gene names: NA
Gene position: NA
Preceding gene: 150377118
Following gene: 150377126
Centisome position: NA
GC content: NA
Gene sequence:
>2361_bases ATGCGGTATGAGCAACCCGCCCTGGTCCGGAACTCGGCTGCCGAGTCCCCGGTCCTTACCGTACTGATAACGATCAGGGT CGCAGCACATTACGACATGATCGAGCGGCTTCGCTTCAGGTCGTTAGACACTCGGATGCCCGACTCTGTGACCTTCCTTG TAATTGACGAGGGCTCCAGCTTTGAGGACGCAGAACGATTGAAGGCCGCATGTGCCGAGATCGGGTTCGACTACGTTCGC CACAACACCGAGAAGGACCTGTTCTGCCTCGCAGGCGCCCGAAACATCGGCGCTTCACTGTCCCGTTCGCAATTCATCAT GTTCGAGGATGTCGACCTTTTTCCTTATCCCGGTTTCTATCAGGACATTATCGACGAGATCCACGTTCAGGGGCTCGATA CGCACTCGAACCGCTTCCTTACTGTCCCCTGCCTCTATCTGAGCGAACAAGCGACCGAGGCGGCCCTTGCTGGAACGCTA TCGAAGAATGAAATTCTTCACGACCACCTGACTGGCGGGCCGCTTGTTGATTTCGCCCTACCCGCCAGTTCGGCGCTCGT TATCAACCGCATGTTTTATCTGTCGATCGGCGGCTCGAACGATCAGTTCAAGGGTTGGGGGCTGGAAGATCTGGAACTCG CCTACCGGCTGACGCGTGGCACCAACAAGTTCATGTCTCCGAAGGACCATCGTTGGCTCATCGAAGGTGGATACGCCCAC AACCCAACTTATCGAGGTTGGCGCGCACAGTTCCGCTTGCATGGCGAGCTTCTCGCCCGCAAATCGATCTACATCTTTCA CGCCCACCACCCGAGAGACACGGCCTGGCGCAACCCGGAACTCCATCGGGCAAACAAAGCTATATTTCAGAGCAGCAATG AGTCCTTCGACGCCAAGGGCCACACATTGCCCTCTCTGCCGGATGCCAAGCGCGGCCGGTCGTTGATATTCGGGCGCGGC ACCTTCGCCTATAACCCCGCTCTCCTGCCTTTGTGGGGCGATCTCGAGGTGAAGGGGTATCAAGACTTCCAGGAGCGGGA CATCATCGAGCATGTCCGCGCCAACGGCATCAACCGGGTGATTTTCACAAACCCCTACGCCAATGACATGCGGCTTTCCG TTTACAACCGAGTGCGATCGGCGGGAATTCCCTTCTACGTCGTTGAGCGTGGCGCGCTTACCGACTCCATGTTCATTGAC GATACCGGCTTTTGCTGTGAGAGCACGCGCTATCGCCGCGAGCACTGGCCTGCAGAACTTGACGCCGGTCGTCTGCGGCG GGTGCAGGATTACATTTCGGCCGAAACTTCCTCGGGCTCGGCTCTTGAAAAACAGGGTGAGCGCATCGGCGCACGTGCCG CGCTTCAAAAACTCGGCATCCCGCCGCAAAAGAAGGTCCTGTTTGTTCCTTTCCAATCCCGCTCGGACACGACCGTCAAT CACTTCGCCGGCCCGATCGGATCATTCGATAACTTCGTTGACCTCGTTCGGGACGTGACAAAGAGGCTGCCACCCGATTG GGTGGTGGTCTTCAAAAAGCATCCGCTTTCGTCAGTTCAAGAGACCGTCCCCGGCGCCATCGACGTCGGCAACATGCACA TCAAGGACCTGATGGAACTCACGGATTACGTTCTGCTTATGAACTCCGGCGTAGGCGTCCTGTCTATCCTGTTCGACCGG CCGTGCATCTATACCGCCCAAGCCTTCTATGCTGACGACGCTCTGAACCGTGGCGCATCCAAGGCTGGCGACGTCCTGCG CCTTCTTAAAGAGGGCTTCACCGTCGACCAAGACAGCCGGCTCCGGTTCTTGTCCTACTTACTCGAAGATTTCTACAGCT TCGGCAAATTCACGGTCACCGAGAAGTCGTACACGGACAACGCTACTCTCTCGATAACAGAGAGGATTGACTACTACCGC GTAAACCTCCTTGGTGCGCGCGTCCTCGACACCGACGACCGCGAGCGGATCCTCAACCCCAATGCTCCCATCTACGATCT TTTCCGTGAGTGGATACGGAGTAATAAGCACACAGAGCGGCAGGCTTCCCCATCTGGAGCCCCCCAAAGTGCGGATGAGG CCTCGCGCAAAGGACGGAGTGCGTTTCACGCCAAGAGGTATCAGGAGGCCGCCCTCATGTTTGACGCCGCCTGCTCGATA CAGCCCAATAGAGCAACCCATTACCGCGCAGCCGCCGAGGCGCTTTTCGCAATGGGGAACAGGAACATCGCCCTTTCACG TCTCGAAAAAGCGCGCCTCCTCGCCCCCGACAACAAGTCAATCAAGCGCCGGATACGTGAGATGAAGAGGCCGCCCTTCC TTCAGTTCCTCTCGAAGCCCTTCCCCATAGCAAAGGATTAG
Upstream 100 bases:
>100_bases GATCTACAGATCAAACGAGCCTTGCGCTTTTGTGGGTTGACAATGACGGCCAGCTTCTGAATTTTCCCGGCGCTTTCAAT GACAGAAAGGTCGCTTCCCT
Downstream 100 bases:
>100_bases GGTTATTCTCGACTACCCAACAAGTATGACGACACGAGGCCCCGCGCCGACGAGATAATAAACGAGGAGTTTTAGCATAC CTCCTCCGCGTTCAATGGAG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>786_residues MRYEQPALVRNSAAESPVLTVLITIRVAAHYDMIERLRFRSLDTRMPDSVTFLVIDEGSSFEDAERLKAACAEIGFDYVR HNTEKDLFCLAGARNIGASLSRSQFIMFEDVDLFPYPGFYQDIIDEIHVQGLDTHSNRFLTVPCLYLSEQATEAALAGTL SKNEILHDHLTGGPLVDFALPASSALVINRMFYLSIGGSNDQFKGWGLEDLELAYRLTRGTNKFMSPKDHRWLIEGGYAH NPTYRGWRAQFRLHGELLARKSIYIFHAHHPRDTAWRNPELHRANKAIFQSSNESFDAKGHTLPSLPDAKRGRSLIFGRG TFAYNPALLPLWGDLEVKGYQDFQERDIIEHVRANGINRVIFTNPYANDMRLSVYNRVRSAGIPFYVVERGALTDSMFID DTGFCCESTRYRREHWPAELDAGRLRRVQDYISAETSSGSALEKQGERIGARAALQKLGIPPQKKVLFVPFQSRSDTTVN HFAGPIGSFDNFVDLVRDVTKRLPPDWVVVFKKHPLSSVQETVPGAIDVGNMHIKDLMELTDYVLLMNSGVGVLSILFDR PCIYTAQAFYADDALNRGASKAGDVLRLLKEGFTVDQDSRLRFLSYLLEDFYSFGKFTVTEKSYTDNATLSITERIDYYR VNLLGARVLDTDDRERILNPNAPIYDLFREWIRSNKHTERQASPSGAPQSADEASRKGRSAFHAKRYQEAALMFDAACSI QPNRATHYRAAAEALFAMGNRNIALSRLEKARLLAPDNKSIKRRIREMKRPPFLQFLSKPFPIAKD
Sequences:
NA
Specific function: NA
COG id: COG4092
COG function: function code M; Predicted glycosyltransferase involved in capsule biosynthesis
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA