Definition Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence.
Accession NC_009620
Length 1,570,951

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Identifier: 150376445

GI number:

Start: 796510

End: 798963

Strand: Reverse

Name: Not Available

Synonym: Smed_4303

Alternate gene names: NA

Gene position: NA

Preceding gene: 150376446

Following gene: 150376444

Centisome position: NA

GC content: NA

Gene sequence:

>2454_bases
ATGGCGACATCGAAGCTCGATGCCTACCGCGGGAAGCGGGATTTTTCAAAAACGCCGGAGCCGGCCGGGAATCTCTCCGG
CGGCGGTAACCGCTTTGTCGTGCACAAGCACCACGCGGCCGCTGACCATTACGACCTGAGGCTGGAGGTCGGCGATGTCC
TGAAAAGCTGGGCGGTGCCGAAGGGACCTTCGCTCAATCCGGCCGACAAGCGGCTGGCGGTAGCGACGGAGGATCATCCC
CTCGATTATATCGACTTCGAGGGCGTGATCCCGGAGGGCGAATATGGCGGCGGCCCGATGATCGTCTGGGACAAGGGCGT
CTGGGCGCCGATGGGCGATGTCGAACAGGACCTGCGCAAGGGCGCCTTCAAGTTCCGTCTGGCGGGGGAGAAACTCAAAG
GCGGCTGGATGCTGACCCGCCTGAAGCCTCGCCCCGGAGAGGAGGATCAGCGCAACTGGCTCCTGTTCAAGGAGCGCGAC
CTCGCCGCCGACACGTCGATCGATATCCTTGCCGCCCGTCCGGAAAGCGTCAAGTCCGGCCGGCGGATCGAGGAACTCGT
GGAAAAGCCCAAGGCAGCGCCCAAACCGGTCAAGCTCAATCCCCGCGCGCTTCCCGGTGCGGTCGAGGGCGCAGCGCCCC
ATCGCGTGGAGCCCCAGCTTGCCACCCCGACGGTCCTTCCTCCCGAAGCCGAGAAAGGTAAGAAGCCCGAGGTATGGCTG
CACGAAATCAAGTTCGACGGCTATCGCACCATGGCCCACCTCGCTGACGGAAGGGTCCGCCTCATCACCCGCGGCGGGCT
GGACTGGACCAAGCGTTACGGAGACCTGCCGGAGGCCTTCCGGCGGCTGCCGTGCCGCGATGCCATCATAGACGGCGAGA
TCGTGGTTCTGGACGAGACGGGGGTCAGCCGGTTCGCCCTTTTGCAGGATGCGCTTTCCACCGGCGCCGGCAACAGCCTC
GTATTCTACGCCTTCGACCTCCTGCACCTGAACGGCTGGAATCTTTTCGACGCCCCGCTCGAAAAGCGTAAAACGCTGCT
GAAGCAGCTGCTTGCGGGGCAGGTCACCGATCGCTCGGCCATCCAGTTCAGCGATCACGTGGTCGGCGAAGGGCGCGCGC
TTTATGACCAGGCCTCGGAGATGGGTCTGGAAGGGATCGTCTCGAAACGCCTCTCGGCGCCTTACCGGAGCGGCCGGTCG
AAGACCTGGACGAAGACGAAGGCACTGAAGGCGGAGGATTTCGTGATCGTCGGCTACACCGTGTCGCAGGCGGCCGAGGG
ACTTGCGGCACTTGCCCTTGGAGAGTGGTCCGACGGAGAGCTGGCATATCGCGGCAAGGTCGGAACCGGCTTCGACGCAG
CGATGCTTGAGAAATTGCTTGAAAGGCTCGAACCTCTGCGCTCCGGTGCCGCAAGGCTCGAAGGAGCGCCCAAGGAAATC
ATCTGGGTACGGCCGCTGCTCAGGGCTCAGATCCATTACGGCAACCGGACGACTGACAATGTGCTGCGCCATGCCGTCTT
CAAGGGCCTCCGCGACGTCGAGTTGACGACGCCGGTATCCCCGTCGAGAAAGCGCCTGATCTCGGACGCGGATCTCGCAA
GCATATCGATCACCAATCCGACACGACGCCTTTTCGGCAAGTCCGGCCCGACCAAGCTCGACCTTGCCGTGTATTACGCG
ATGATCGGCGATTTCATGCTGCCGCACATCCTCGGCCGTCCGGTTTCGCTGGTGCGCTGTCCCAGCGGCCGGACTCAGGA
TTGTTTCTTCCAGCGCCACCCCTTCACCGGCATGCCGCCTTCGGTCGCGACGTTCGAGGCAATCAACTCCGAGGGCGAGT
CCAGGACCTATCTGTCTGTCGAGGACGCGAAGGGATATCTGGCATTGGCGCAATTCGGAGTCGTCGAATTCCACAACTGG
GGAGCCACGCGCAGGCTCCTTGGCAAGCCCGACCGGGTTGTCTTCGACCTCGACCCCGGCGAAGGCATCGCTTGGCGGGA
AGTTGTCGAGGCCGCAATCCACATCAAGTCCGAGCTCGAGGCGCTCGACCTCGTGCCCTTCGTCAAGACATCGGGCGGCA
AGGGAGTGCACGTCGTGGTTCCGGTCAAGCCGAAGCTCGACTGGAAGAAATTCCATCCGGCGACGAGTGCGCTCGCCGGC
CGCCTCGCGGCGACGGCTCCGGATAGCTTCACCACCACCATGGGCAAGAACAACCGGGTGAAGCGCATCTTCATCGATTA
TCACCGCAACGCCCGCAGCCATACCTGGGCGGCTCCCTATTCACTGCGGGCCCGCACCAATTTGCCCGCGTCGACGCCGC
TCAGCTGGGCCGATCTTGAGGCTATCGACGCCCCGCAGGATTTGAACTATTCTTCGCTGCCGGGCCTTCTGGCCTCGTCC
GGCGATCCCTGGGCCGACATCGATGCGTTCGCGAGGGATCTGCCGTTATTGTAG

Upstream 100 bases:

>100_bases
CTTGGCAATCCGGGCAGGCTCGCCTGACATTCCGACCTGTGGGCAAGCGGTGTCCGCGGCCGATATTGCAGCCGGCCATG
AGAAGCCATAGCTTGGGGGC

Downstream 100 bases:

>100_bases
AGGCGCGGGATGCAGGCGGAAATCGCATGCACTTTCCTCATCCCGCTCTGGCGCAGTTGTTATCGCAGTGCCGCGTAGGA
GAAAACCATGGCACCCAGGG

Product: DNA ligase D

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>817_residues
MATSKLDAYRGKRDFSKTPEPAGNLSGGGNRFVVHKHHAAADHYDLRLEVGDVLKSWAVPKGPSLNPADKRLAVATEDHP
LDYIDFEGVIPEGEYGGGPMIVWDKGVWAPMGDVEQDLRKGAFKFRLAGEKLKGGWMLTRLKPRPGEEDQRNWLLFKERD
LAADTSIDILAARPESVKSGRRIEELVEKPKAAPKPVKLNPRALPGAVEGAAPHRVEPQLATPTVLPPEAEKGKKPEVWL
HEIKFDGYRTMAHLADGRVRLITRGGLDWTKRYGDLPEAFRRLPCRDAIIDGEIVVLDETGVSRFALLQDALSTGAGNSL
VFYAFDLLHLNGWNLFDAPLEKRKTLLKQLLAGQVTDRSAIQFSDHVVGEGRALYDQASEMGLEGIVSKRLSAPYRSGRS
KTWTKTKALKAEDFVIVGYTVSQAAEGLAALALGEWSDGELAYRGKVGTGFDAAMLEKLLERLEPLRSGAARLEGAPKEI
IWVRPLLRAQIHYGNRTTDNVLRHAVFKGLRDVELTTPVSPSRKRLISDADLASISITNPTRRLFGKSGPTKLDLAVYYA
MIGDFMLPHILGRPVSLVRCPSGRTQDCFFQRHPFTGMPPSVATFEAINSEGESRTYLSVEDAKGYLALAQFGVVEFHNW
GATRRLLGKPDRVVFDLDPGEGIAWREVVEAAIHIKSELEALDLVPFVKTSGGKGVHVVVPVKPKLDWKKFHPATSALAG
RLAATAPDSFTTTMGKNNRVKRIFIDYHRNARSHTWAAPYSLRARTNLPASTPLSWADLEAIDAPQDLNYSSLPGLLASS
GDPWADIDAFARDLPLL

Sequences:
NA

Specific function: NA

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA