Definition | Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence. |
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Accession | NC_009620 |
Length | 1,570,951 |
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Identifier: 150376180
GI number:
Start: 495427
End: 497301
Strand: Reverse
Name: Not Available
Synonym: Smed_4035
Alternate gene names: NA
Gene position: NA
Preceding gene: 150376181
Following gene: 150376179
Centisome position: NA
GC content: NA
Gene sequence:
>1875_bases GTGTTTTCACATTCCGAACATATCCGCGAAATTGAGCGCGTTGGCCGTGGCCTTCCGGTCAGCCGCGACGAAACGGTCGT GAAATCCTGGATGCGCTGCCTCGAGCATCACCGGCTCGACCCGGCCCAGAGTTGCGAAGCCTATATCGTGCCTGAAACCC GGCTCAAGGAACACCGGCAGCAATCGGAGGACCTGATCGGCATCGCTCGCTCGGGGCTGGAGCACCTGTTCCGCCAGGTT GCCGGGCAGAACTACGTGCTGCTTCTCTCCGACCGGGAAGGCGTGACCGTGGAGTTCCTTGGAGACCCTCTCTTCAACAA CAGCTTGCGAAAGGCCGGGCTTTATCTCGGCTCGGAGTGGTCCGAATGGCGCGCCGGTACCTGTGCGGTCGGCGCATGCC TGGAAACGGGAGAGGCGCTGACGATCCATCAGACCGACCATTTCGACAATACCCACACCCCGCTCTCCTGCACGGCGGCA CCGATTTATGACAACAAGGGCGAACTCTCCGCGGTGCTGGATATCTCGCTGCTGAGTTCGCCGATCCTCAAGGCCAGCCA GAACCTCGCGCTGCATCTGGTGACCGCCACCGTGAGACGCATAGAGCTTGCCAACCTCATGGCGCAGGCGCGAAACCAGT GGGTGCTGCGGTTCTCGCGCTCACCCGAATTTCTCGATGTCGATCCGGAGGCGGCCATCTCGATCGACGGCCTCGGCCGG ATCGCCGGAATGACGCATGGGGGAGCCAAAATACTCGCACGCTCGACCGGGCTGGACTGGCGCGATCCCCGGAAACTGAT CGGCGAGCCGGTGTCACGTTTCTTCGATATCGAGGTCGACGATCTTTCCGACCTCACCCGGCGCCGCCCGACCCAGGAGC GCCTCGTCTTCGCCCGCGACGGAAATGCGCTCTTCGCCCATGCGATCGAGCCGCATTCGACCGTACGTGCGCCAGTCGTC TCGCGCGAGCAGATTCCGCCGGCCTTGCGGCGGCTCGGCGGCGACGCGCCGGTGATCGCCGCGCTGCAGGCAAGGGCCGC GAAGCTCGCGCGTACCGGGCTGCCGATCCTCGTTCAGGGAGAGACGGGGACCGGCAAAGAGCATCTTGCGCGCGCTATCC ACGAGGGCAGCGGTCTGAAGGGGCAGTTCGTCGCGATCAACTGCGCGGCGATCCCCGAGCAATTGATCGAGAGCGAGCTT TTCGGCTACCTGCCGGGCGCCTTTACCGGCGCTTCGGCGAAGGGGCGCAAGGGCCTGATCGAGCAGGCGGACGGAGGAAC GCTCTTCCTAGACGAGATAGGCGACATGCCGCTTGCCCTGCAAAGCAGGCTGTTGCGCGTACTTGCCGAGGGCGAGGTCC TGCCGGTCGGCGGCACCGTGCCGCGAAAGGTCCGGATCCGGGTCGTGTCGGCATCGCACCGGCCACTGCAGACGCTTGTC GCGCAAGGGGCGTTCCGCGAGGATCTCTATTACCGGCTCAATGCCGCGACCCTCTCGATTCCGGCGCTCAGGGACCGGCC GGACTTTGACTGGATACTCGAACAGCTGCTGAAGCGGCACGGCGACGGTGAGTTGATATTGTCGGAGGCCGCGCTCGCGG CGCTCAAGGCGCATGATTGGCCGGGAAACATCCGCGAACTCGACAATGTCGTCGCCGTGGCTGCAGCGCTCGCCGAGAAC GGCGTCGTGGAGATCGGCGACCTGCCGGACCACCTCCTGGTGAATGCGGACACCGTCGGCGGAAGCGAGGCGGGGGCGGC CTTGAGCCTTATGCTCGCCACTTGCGACTGGAATATTTCCGAGACCGCCCGCCGGCTGGGGCTCGATCGCTCGACGGTGC ACCGGCAGATCAAGCGCTACAGCCTCAAGCGCTGA
Upstream 100 bases:
>100_bases AATGAGGTAACCCGAGCCCAAAAACGGCCGGTTCCTTTACATTCGGCCTCGCCATGCGCACACTTCAGGCGAGGAGCGAG GTGTCCGTTGGGAGGCGGTC
Downstream 100 bases:
>100_bases GCACGGTTGCGCCCGCGCAACAGGTCAGGTGCCACAGCTGTGGCGCTCGAACCACTGACTGCAACAAGGCCAGTCATCGC CGGCATTGATTACATTGCAT
Product: Fis family GAF modulated sigma54 specific transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>624_residues MFSHSEHIREIERVGRGLPVSRDETVVKSWMRCLEHHRLDPAQSCEAYIVPETRLKEHRQQSEDLIGIARSGLEHLFRQV AGQNYVLLLSDREGVTVEFLGDPLFNNSLRKAGLYLGSEWSEWRAGTCAVGACLETGEALTIHQTDHFDNTHTPLSCTAA PIYDNKGELSAVLDISLLSSPILKASQNLALHLVTATVRRIELANLMAQARNQWVLRFSRSPEFLDVDPEAAISIDGLGR IAGMTHGGAKILARSTGLDWRDPRKLIGEPVSRFFDIEVDDLSDLTRRRPTQERLVFARDGNALFAHAIEPHSTVRAPVV SREQIPPALRRLGGDAPVIAALQARAAKLARTGLPILVQGETGTGKEHLARAIHEGSGLKGQFVAINCAAIPEQLIESEL FGYLPGAFTGASAKGRKGLIEQADGGTLFLDEIGDMPLALQSRLLRVLAEGEVLPVGGTVPRKVRIRVVSASHRPLQTLV AQGAFREDLYYRLNAATLSIPALRDRPDFDWILEQLLKRHGDGELILSEAALAALKAHDWPGNIRELDNVVAVAAALAEN GVVEIGDLPDHLLVNADTVGGSEAGAALSLMLATCDWNISETARRLGLDRSTVHRQIKRYSLKR
Sequences:
NA
Specific function: NA
COG id: COG3284
COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA