Definition Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence.
Accession NC_009620
Length 1,570,951

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Identifier: 150375989

GI number:

Start: 295376

End: 297889

Strand: Direct

Name: Not Available

Synonym: Smed_3840

Alternate gene names: NA

Gene position: NA

Preceding gene: 150375988

Following gene: 150375991

Centisome position: NA

GC content: NA

Gene sequence:

>2514_bases
TTGACGGGGCTGATATTGCTCTGCACCGCTGTCGCCTGGTCGCTGTTCCAGCTCTGGTACGCGTCCCCACTGCCCTTCGT
CTTCGGTTTCGGCATCCTGAACGATACCGAAGCCCGCGCCATCCATCTCGGTTTTGCGCTGTTCCTGACCTTTCTTGCCT
ACCCCGCACTGAGAAGCTCGCCGCGTGACCGGGTGCCGCTCGCCGACTGGGTGCTGGCGGCACTCGGCGCCTTTGCGGGC
GCCTACCTGTTCATCTTCTACGGCGATCTGGCCGGACGACCGGGCCAACCTTCGACACTCGATCTCGTCACCGGCACCAT
CGGCATCCTGCTCCTGCTGGAGGCCACGCGTCGCGCGCTCGGCCTGCCAATGGTGATCGTCGCCGGCGTCTTCATCTTCT
ACACCTTTGCCGGCCAGTACATGCCGGACGTTATCCAGCATCGCGGCGCCTCCCTGGTGAAATTCATCAATCACCAATGG
CTGACGACGGAGGGCGTGTTCGGCATTGCGCTCGGCGTTTCGACGAGCTTCGTCTTCCTCTTTGTCCTGTTCGGAACGCT
GCTCGAGAAGGCGGGGGCCGGCAACTGGATGATGCAGATTTCCATCGCATTGCTCGGACACCTGCGCGGCGGCCCCGCCA
AGGTGGCCGTTGTCTCCTCGGCCCTGAACGGCGTCGTCTCCGGCTCGTCGGTGTCCAATGTCGTCTCTGGCGGCATCTTT
ACCATTCCACTGATGAAACGCACCGGGCTTTCCGGCGTAAAGGCCGGCGCGATCGAGGCCAGCGCCTCGATAAACGGTCA
GATCATGCCGCCGGTCATGGGCGCCGCCGCATTTCTCATGGTCGAATATGTTGGAATCCCCTATTCGGAGATCGTCAAGC
ACGCGTTGCTGCCGGCCGTCTTCTCCTACATCGCGCTTCTCTACATGGTGCATCTGGAGTCCGTTAAGCTCGACATGCAA
CCGATCCCCCAGCGTCCGACTCCGGCGCGCGAGCGGTGGATCCGCATGGGCCTAGGGCTCACCGGCAGCGTCCTTGCAGT
CTGCCTTCTCTATTACGGGATCCTCGGCATACGGGCGGCCTTCGGGGCAAACGCACCCTTGCTGCTCGCAATCGGAGGCG
CGGCGCTTTACATCGCAACGATCTGGTATTCGTCGCGCTATCCCGATCTGGAGCTCGACGACCCCAACGCGCCGATACTG
GAGCTGCCGCGGGCATGGGACGTAACGCGAACCGGCCTCGACTTCCTCATTCCGATCGCCGTCCTGCTCTGGTGCCTCAT
GGTCGAGCAGCTCTCGCCCGGGCTTTCCGCCTTTTGGGCCACCGTGACGATCCTCGCCATCGTCGCCACCCGCAAGCCGC
TGATGGCGATCTTCCGCAAGGAGGATTTCGCAAGCTCCGTCGGCGCCGCTGCATGGGACCTCGTAGACGGCCTGGCGCTT
GGCGCGCGCAACATGATCGGCATCGCCGTCGCCACGGCGACTGCCGGCATCGTCGTCGGGACGATCACGCTGACAGGCCT
CGGCCTGATGATGACCGAGCTGGTCGAATTCATCTCCGGCGGCAACGTCATCATGATGCTTATTCTCATCGCCGCAATCA
GCCTTGTGCTGGGCATGGGGATTCCCACCACCGCCAACTACATTCTGGTAGCCACCCTGATGGCGCCGGTCGTCGTCGAG
CTCGGCTCGCAGGCGGGCCTCGCCATTCCGCTGATCGCGGTGCATCTCTTCGTCTTCTATTTCGGCATCATGGCCGATAT
CACGCCGCCGGTGGGGCTGGCCTCATTTGCCGCAGCTGCAATTTCCAAGGAAGACCCCATCGCGACCGGTTTCCAGGGCG
CGCTCTATTCGCTGCGCACCGCGATCCTGCCGTTCGTCTTCATATTCAATCCGGCGATCCTGCTGATCGGCGTCGATACC
TGGGCGCACACGATCTGGGTTGCCGCCATCTCGCTCGCCGCTATCCTGCTCTTCTCGGCCGCGACGATGAACTGGTTCGT
GACGAAGAGCCGCTTGTGGGAGAGCGCGGTCCTGCTTCTCGCCTGCTTCTCGCTGTTCCGGCCGGACTGGTGGGTCAATC
AGATCTCGCCGCCTTACGAGGAATTGCCGGCTTCCGAGTTCCTGAGGACGGTGCAGGAGGCTCCCGCAAAAGCTCGAATC
AACTTCGTGGTTCAAGGCATCGACCTTATGGGTGACGACGTTCGCAAGACCGTCAACGTGCCGCTCGGCGAACCCGGCGA
ACCGCTGCAGCGTCTGCGGGCGATCGGCCTCACGGTCACACCGGCGGGCGACAGTTTGATGATCAGCAATGTCGCCTTCG
GATCCTATGCCAAGCGCATCGGTCTCGATGTCGGCTATGACGTCGTCGCAGTGCTGAAGAAGGCCGATCAACCCTCGACC
GCTATCCCGGTGAGCATCGCGCTGATTCTGACTGCAGGCATTGCCGGCCTGCAGTTCGCACGCAAGAGGGCCGATCGCAG
CGGAGCCAGCCTGCGGGGAACCGCACGCAAATAA

Upstream 100 bases:

>100_bases
TGGGGAGGGTGCCACGAGCGAGCTTCAAGAACGAAAGGTCGATGTCGACCTCGAGCAGCTGGTTGCCGAAGCGGATACCG
GCGGACGCAACGCCAAGGGG

Downstream 100 bases:

>100_bases
ACGGCAGTCATGTCGCCGAGGATTCGCGCACGACCAGTAGCGGCGGTGCGATCGGGCGCCGCTCGGGATCCTTGCCTTCC
ATCACGGCGATCAGCAGGTC

Product: TRAP transporter, 4TM/12TM fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>837_residues
MTGLILLCTAVAWSLFQLWYASPLPFVFGFGILNDTEARAIHLGFALFLTFLAYPALRSSPRDRVPLADWVLAALGAFAG
AYLFIFYGDLAGRPGQPSTLDLVTGTIGILLLLEATRRALGLPMVIVAGVFIFYTFAGQYMPDVIQHRGASLVKFINHQW
LTTEGVFGIALGVSTSFVFLFVLFGTLLEKAGAGNWMMQISIALLGHLRGGPAKVAVVSSALNGVVSGSSVSNVVSGGIF
TIPLMKRTGLSGVKAGAIEASASINGQIMPPVMGAAAFLMVEYVGIPYSEIVKHALLPAVFSYIALLYMVHLESVKLDMQ
PIPQRPTPARERWIRMGLGLTGSVLAVCLLYYGILGIRAAFGANAPLLLAIGGAALYIATIWYSSRYPDLELDDPNAPIL
ELPRAWDVTRTGLDFLIPIAVLLWCLMVEQLSPGLSAFWATVTILAIVATRKPLMAIFRKEDFASSVGAAAWDLVDGLAL
GARNMIGIAVATATAGIVVGTITLTGLGLMMTELVEFISGGNVIMMLILIAAISLVLGMGIPTTANYILVATLMAPVVVE
LGSQAGLAIPLIAVHLFVFYFGIMADITPPVGLASFAAAAISKEDPIATGFQGALYSLRTAILPFVFIFNPAILLIGVDT
WAHTIWVAAISLAAILLFSAATMNWFVTKSRLWESAVLLLACFSLFRPDWWVNQISPPYEELPASEFLRTVQEAPAKARI
NFVVQGIDLMGDDVRKTVNVPLGEPGEPLQRLRAIGLTVTPAGDSLMISNVAFGSYAKRIGLDVGYDVVAVLKKADQPST
AIPVSIALILTAGIAGLQFARKRADRSGASLRGTARK

Sequences:
NA

Specific function: NA

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA