Definition | Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence. |
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Accession | NC_009620 |
Length | 1,570,951 |
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Identifier: 150375924
GI number:
Start: 219853
End: 223005
Strand: Direct
Name: Not Available
Synonym: Smed_3774
Alternate gene names: NA
Gene position: NA
Preceding gene: 150375923
Following gene: 150375925
Centisome position: NA
GC content: NA
Gene sequence:
>3153_bases ATGCAAGCCTCCACAGAGGACAGGAAACCGTTCAATCTTTCGCGCTGGGCGATCGGGCATCCGAGCATCGCGCGCTTCCT CCTGGCGCTGATCATCATCACAGGCGCCCTCGGGCTCCTGCGCATGGGACAACGCGAGGATCCGGAATTCACGTTCCGCG TCATGGTGGTGCAAGCCGTATGGCCAGGAGCATCCATCCAGGAAATGGAAGACCAGGTCGTCAACAAGATAGAGCGCAAG CTGCAGGAAACGCCGCACCTCGATTTCGTCCGCTCCTATACGCGCGCCGGCAGCGCCATCATCACCGTCCAGATCGAGGG CGACACCAACGCAGACGAGGTCGCCGACGCGTTCTATCAGGTGCGCAAGAAGGTGGGCGACATAGCCAACGAGCTGCCCG AAGGCGTGCTCGGCCCCTATTTCAACGACGAATTCGGTGACACCTTCATCACCTTGCATTCGATCAGCGGCGACGGCTTC AGCTATCCGGAGCTGAGGCGCTTCGCGATCGAAGGCCGTGACATGCTGCTGACGACGCCAGGTGTCGAGAAGGTGGTGAT CCTCGGCGACCAGCCGGAGAAGATTTTCATCGACGTCTCCTCCAAGGCGCTCGCCGAACGCGGCCTGACGCTCAACGACC TGCGCGATGCCATTGCCGGCCAGAACAATGTCGATCACGCGGGTTCCATCGATACGGGCACGCGCTCGGTTCGCATCTCG GTTGAAGGCGGCGTCACCAAGGCCGAAGACATCCGTGAGCTTCGGCTAAGGGCGGGAGAAAGGACCATTCGGCTCGGCGA CATCGCGACGGTTACTTCCGGTCTGGAAGACCCCTATTCCCGGAAATTCCGTTTCAACGGCCACGACAGCGTCCAGATCG GCGTCGTCATGGCGAAGGGTTTCAACGTCACGGACGTCGGCAAGGCGGTCGAGGCTACCTACGATCGATTCGAGTCCGCC CTTCCCTATGGCGTGTCGGTCGATCAGGTCTCCAATCAGCCGGAGGTCGTCACCGAAGCAATAAGCGAATTCAGCCACGC GCTTGTCGAAGCGCTGATCATCGTCCTCGTCGTCTCCTTCCTGTCGATCGGCTGGCGCTCCGGTCTCGTGATCGCGATCG CCATTCCGCTCGTGCTCGCAGCCACTTTTGCGATCATGTACGAACTCGGCATCGACCTGCAGCGCATCTCGCTCGGAGCT CTGATCATCGCTCTCGGCCTGCTCGTCGACGACGCCATGATTGTGGTCGAGATGATGGAGCGAAAACTCGAAGAAGGGCT GGAAAAGATCGATGCGGCGAGCTTCGCCTATTCCTCGACCGCTTTTCCCATGCTGACCGGCACCCTGATCACCACCGCCG GCTTTATCCCCGTCGGCTTCGCGCAATCGACCGCCGGCGAATATGTCCGTTCGCTCTTCTATGTCGTCGGTATTGCCCTT GTGGTCTCCTGGTTTGTGGCCGTCTACTTCACTCCTTGGCTCGGCTACATGATCCTGAAGCAGCGCCACCACGCCGGCAC CCATCACGACGTCTTCGATACGCGCTTCTATCGTCGCCTGAGGTCAACCGTCGGCTGGGCAGTGCGCCACCGCATCACTG TTCTCCTGATGACGCTCGCCATTTTCATGACGAGCCTCTGGGGGTTCCAGTTCATTCCGAAGAACTTCTTCCCGCAATCC TCGCGACCCGAAATCCTGGTCGACCTCTGGCTGCCAGAAGGAACGAGCATCAAGGAAGTGGAAAAGCAGGCAAAGGCGCT CGAGCAACGATTGATGGACGATAAGGACAAGCGCTTCATCGCCACCTATATCGGAGAAGGCGCGCCGCGCTTCTTCCTGC CCCTCGACCAGCAGCTTCGCAACCCGAACTTCGCGCAGCTCCTCGTCATGGCGAAGGACGAACCAGCCCGCGAGAGGCTG ATCGGCAAGTTGCGAACGGTGCTTGCCGAGGAATTCCCTTCGATCCGTACCAAAGTCGACCGATTGTTCCTGGGACCGCC GACCGGCTGGCCGGTGCAGATGCGGGTGATGGGGCCCGACCGCGAAGAAGTGCGCCGCATCGCCAACGAAGTGAAGGCGA AATTTCGGGAAAATCCATTGCTCGGCGCCATTCATGATGACTGGCTGGAGCCTGTGCCGGCGATGAAGCTTGTGATCGAC CAGGACCGCGCCCGTGCCCTCGGCATCACCTCGCAACGTATCCGCCAGATGCTGCAGGCGGCAATGTCCGGCGTTCCGCT GGACAGCTTCCGGGACGGAGAAGAGGCGGTCTCGATCGTGGCGCGAGAGCCCGGCGGCAATCGCCATCTGCTCTCCGCGG TCCAGTCGGTGTATGTGCCCACCGACTTCGGTGGCTTCGTCCCCGTATCGCAGGTCGCCAAGGTCGTGCCCGTGATGGAA CAGGGGGTCGAGTGGCGGCGCGACCGGCTCCCCACAATCACCGTGCGCGCAACGCTCCCCGACGGCGTGCAGTCGAACGA CGTCGCGATGAAGCTCTTCGACGAACTCAGGGGACTGAGAGACAGTCTCCCGCCGGCCTACAAGGTGGAGATCCAGGGTG GCGCCGAGGACAGTGCCGAAAGCCAGGCCTCGATCGCGGCCAAGGCGCCGATCATGCTGGTGGTCATCGTCATCCTTCTG ATGGTGCAGCTCCAGCACTTCGGCAAGGCGATGCTGGTGCTCGCGACCGGTCCGCTCGGGATCATCGGCGCCGCAGCTGC GCTGCTCATCAGCGGAGCGCCCTTCGGCTTCGTCGCCATCCTCGGCGTTATCGCGCTGCTCGGCATCATCATCCGCAACT CGATCATTCTCGTGGACCAGATCGACCAGGATATCGCGGCCGGGATGGAGCGTTACGAGGCGATCATCGGTGCGGCGGTG CGCCGCTTCCGGCCTATCACGCTCACCGCGCTCACCGCGGTGCTGGCATTGATCCCGATCTCTCGCGGCGTGTTCTGGGG ACCGCTCGCCTATGCGATGATGGGCGGTATCCTGGTGGCAACCGTTTTGACGATCGTCGTGCTGCCGGCCGCCTATGCGC TCTTCTTCGGAAAGGAACCGAAAGCGCGCAAGACGGCCCCGGGGCCGGCGGCCGCGCAAGGAGATGCCGACGAAGACTCC ACGCCCTATCCGGCGCCGCTGGCGGCGGAATGA
Upstream 100 bases:
>100_bases CTGCAGGCGGACGAACAGCAATCGGCCGAGCAACAGTCCGCCCGGGCCGAAACGCCCGAACTCCTCCGCTAACCTCCACC GATAGAACGGGACTACGGCC
Downstream 100 bases:
>100_bases CTTCTGCCGGGGCGTGGCACGCCGAGGTCTTGCCTATTTCTGTCGGAATCAAAAAAATGTGATAATGTAATTTCAGATTC AATCTGCGATCATAGGTGAA
Product: acriflavin resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1050_residues MQASTEDRKPFNLSRWAIGHPSIARFLLALIIITGALGLLRMGQREDPEFTFRVMVVQAVWPGASIQEMEDQVVNKIERK LQETPHLDFVRSYTRAGSAIITVQIEGDTNADEVADAFYQVRKKVGDIANELPEGVLGPYFNDEFGDTFITLHSISGDGF SYPELRRFAIEGRDMLLTTPGVEKVVILGDQPEKIFIDVSSKALAERGLTLNDLRDAIAGQNNVDHAGSIDTGTRSVRIS VEGGVTKAEDIRELRLRAGERTIRLGDIATVTSGLEDPYSRKFRFNGHDSVQIGVVMAKGFNVTDVGKAVEATYDRFESA LPYGVSVDQVSNQPEVVTEAISEFSHALVEALIIVLVVSFLSIGWRSGLVIAIAIPLVLAATFAIMYELGIDLQRISLGA LIIALGLLVDDAMIVVEMMERKLEEGLEKIDAASFAYSSTAFPMLTGTLITTAGFIPVGFAQSTAGEYVRSLFYVVGIAL VVSWFVAVYFTPWLGYMILKQRHHAGTHHDVFDTRFYRRLRSTVGWAVRHRITVLLMTLAIFMTSLWGFQFIPKNFFPQS SRPEILVDLWLPEGTSIKEVEKQAKALEQRLMDDKDKRFIATYIGEGAPRFFLPLDQQLRNPNFAQLLVMAKDEPARERL IGKLRTVLAEEFPSIRTKVDRLFLGPPTGWPVQMRVMGPDREEVRRIANEVKAKFRENPLLGAIHDDWLEPVPAMKLVID QDRARALGITSQRIRQMLQAAMSGVPLDSFRDGEEAVSIVAREPGGNRHLLSAVQSVYVPTDFGGFVPVSQVAKVVPVME QGVEWRRDRLPTITVRATLPDGVQSNDVAMKLFDELRGLRDSLPPAYKVEIQGGAEDSAESQASIAAKAPIMLVVIVILL MVQLQHFGKAMLVLATGPLGIIGAAAALLISGAPFGFVAILGVIALLGIIIRNSIILVDQIDQDIAAGMERYEAIIGAAV RRFRPITLTALTAVLALIPISRGVFWGPLAYAMMGGILVATVLTIVVLPAAYALFFGKEPKARKTAPGPAAAQGDADEDS TPYPAPLAAE
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA